BAC Information

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BAC

Clone NameB6Ng01-174M08
Chromosome10 (Build37)
Map Location 98,988,993 - 99,160,812
singlet/doubletdoublet
Overlap geneLOC667502
Upstream geneEG432494, Atp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232
Downstream geneCsl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174M08.bB6Ng01-174M08.g
ACCGA002755GA002756
length715855
definitionB6Ng01-174M08.b B6Ng01-174M08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(98,988,993 - 98,989,703)(99,159,964 - 99,160,812)
sequence
gaattcatggaccacaaaagagtgacgtttctggaaggcatttcttatca
gcttataggctagaactctcaagagggaagcaggccaagctcctgtctag
catgaacaggtcccagggaaggggttgtgatctaggtgtgagtctggggt
gttttatagaagatggcagaaaccatgataaggcatagcaggtaccttgg
ccaggacagtaggcctgcccttgaggaaccaggtaccactcagttttgct
cacagcttcataactatgcttcccaatggtgctcacagcgtgatataaag
gaagaaagaaaaggaaaagcatccctgttctccacagggcagaaccaagg
gccttcctggcttctggccaaggacaggactcagagctgttggccttcag
gacatgtcctcgatcaattgcctaaccagtttctgtcacctgttgtcatc
agtgaaatgtacttaggttgcgtttaaagttcagggttttcatgtaatgc
cgtctaaactgaagcgatcctggagaaaaggcaggcaatactgacaggct
taggagatggctcagtcagtaacattctaggtacacaagcatgaagagct
gagtttggatccctaggcctttacataaaaaggacatacctttctggcat
attgcctgtaatcctagagttgaaggggcagagacaagaagacctctggg
ggcttgctagcaagt
gaattcaggtgtgaggcgaagtggcaagagttgcaaattaaataagctct
gtgtttggagtttttcctttagtgtgctgctgagacttgcccgtggcttc
agggaacttcatgattaagttggaacgaagatctcatgcctcctgtttaa
tgtagcagaggcaaggttattaaatatttcttggcaattaattgcttgag
ctacgcccttttttcacagcttcggtttcggctgtgcaggaaaggagaaa
acatttaattgcccctaatttgttgctgtagttcaaccataagcctgagc
attgtactgaggccagtggagaatttttaaggggcttcacagcgacattc
cccgaggaagaattagttttcattttatgcaacaatcagacagcctcttt
gatccatgactttctttgaaattaaggaaattacgagaagctgccaatat
gtagcaaactcagtgctgtttggaaaaaaaaaaaaaaaaacccgtcctcc
tgctctattgtctttgcacagtctgatggagcctcactggcctgttggcc
aggatcctgagagaaattcctgtttttgagagaggctttgaaagagggat
tgaaggtaatctttcctccccatctgtccagtctctgtgttacctgcagt
cacctgagattctgatagccctttctaatctgcctgccttcctgtgttct
agacctccaatttaaccacttgtgtttaaaaattcttgcatcttggctta
agacaaccttcttggttttcagattctttctgattttctttttagtactt
accattaaaaaataaatttatgtgattagtgtcaatcagttctttatctc
tcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98988993_98989703
seq2: B6Ng01-174M08.b_52_766

seq1  GAATTCATGGACCACAAAAGAGTGACGTTTCTGGAAGGCATTTCTTATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGACCACAAAAGAGTGACGTTTCTGGAAGGCATTTCTTATCA  50

seq1  GCTTATAGGCTAGAACTCTCAAGAGGGAAGCAGGCCAAGCTCCTGTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAGGCTAGAACTCTCAAGAGGGAAGCAGGCCAAGCTCCTGTCTAG  100

seq1  CATGAACAGGTCCCAGGGAAGGGGTTGTGATCTAGGTGTGAGTCTGGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACAGGTCCCAGGGAAGGGGTTGTGATCTAGGTGTGAGTCTGGGGT  150

seq1  GTTTTATAGAAGATGGCAGAAACCATGATAAGGCATAGCAGGTACCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATAGAAGATGGCAGAAACCATGATAAGGCATAGCAGGTACCTTGG  200

seq1  CCAGGACAGTAGGCCTGCCCTTGAGGAACCAGGTACCACTCAGTTTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAGTAGGCCTGCCCTTGAGGAACCAGGTACCACTCAGTTTTGCT  250

seq1  CACAGCTTCATAACTATGCTTCCCAATGGTGCTCACAGCGTGATATAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTTCATAACTATGCTTCCCAATGGTGCTCACAGCGTGATATAAAG  300

seq1  GAAGAAAGAAAAGGAAAAGCATCCCTGTTCTCCACAGGGCAGAACCAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGAAAAGGAAAAGCATCCCTGTTCTCCACAGGGCAGAACCAAGG  350

seq1  GCCTTCCTGGCTTCTGGCCAAGGACAGGACTCAGAGCTGTTGGCCTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCTGGCTTCTGGCCAAGGACAGGACTCAGAGCTGTTGGCCTTCAG  400

seq1  GACATGTCCTCGATCAATTGCCTAACCAGTTTCTGTCACCTGTTGTCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTCCTCGATCAATTGCCTAACCAGTTTCTGTCACCTGTTGTCATC  450

seq1  AGTGAAATGTACTTAGGTTGCGTTTAAAGTTCAGGGTTTTCATGTAATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAATGTACTTAGGTTGCGTTTAAAGTTCAGGGTTTTCATGTAATGC  500

seq1  CGTCTAAACTGAAGCGATCCTGGAGAAAAGGCAGGCAATACTGACAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTAAACTGAAGCGATCCTGGAGAAAAGGCAGGCAATACTGACAGGCT  550

seq1  TAGGAGATGGCTCAGTCAGTAACATTCTAGGTACACAAGCATGAAGAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGATGGCTCAGTCAGTAACATTCTAGGTACACAAGCATGAAGAGCT  600

seq1  GAGTTTGGATCCCTAGGCC-TTACAT-AAAAGGACATACCTTTCTGGCAT  648
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  GAGTTTGGATCCCTAGGCCTTTACATAAAAAGGACATACCTTTCTGGCAT  650

seq1  A-TGCCTGTAATCCTAGAGTTGAAGGGGCAGAGACAAGAAGACCTCT-GG  696
      | ||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTGCCTGTAATCCTAGAGTTGAAGGGGCAGAGACAAGAAGACCTCTGGG  700

seq1  GGCTTGCTAGCAAGT  711
      |||||||||||||||
seq2  GGCTTGCTAGCAAGT  715

seq1: chr10_99159964_99160812
seq2: B6Ng01-174M08.g_72_925 (reverse)

seq1  AAGAGAGAT-AAGAACTGATTGACACTAATCACAT-AATTTA-TTTTTAA  47
      ||||||||| ||||||||||||||||||||||||| |||||| |||||||
seq2  AAGAGAGATAAAGAACTGATTGACACTAATCACATAAATTTATTTTTTAA  50

seq1  TGGTAAGTACTAAAAAGAAAATCAGAAAGAATCTGAAAACCAAGAAGGTT  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGTACTAAAAAGAAAATCAGAAAGAATCTGAAAACCAAGAAGGTT  100

seq1  GTCTTGAAGCCAAGATGCAAGAATTTTTTAACAC-AGTGGTTAAATTGGA  146
      ||||| |||||||||||||||||||||| ||||| |||||||||||||||
seq2  GTCTT-AAGCCAAGATGCAAGAATTTTTAAACACAAGTGGTTAAATTGGA  149

seq1  GGTCTAGAACACAGGAAGGCAGGCAGATTAGAAAGGGCTATCAG-ATCTC  195
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GGTCTAGAACACAGGAAGGCAGGCAGATTAGAAAGGGCTATCAGAATCTC  199

seq1  AGGTGACTGCAGGTAACACAGAGACTGGACAGATGGGGAGGAAAGATTAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACTGCAGGTAACACAGAGACTGGACAGATGGGGAGGAAAGATTAC  249

seq1  CTTCAATCCCTCTTTCAAAGCCTCTCTC-AAAACAGGAATTTCTCTCAGG  294
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTTCAATCCCTCTTTCAAAGCCTCTCTCAAAAACAGGAATTTCTCTCAGG  299

seq1  ATCCTGGCCAACAGGCCAGTGAGGCTCCATCAGACTGTGCAAAGACAATA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGCCAACAGGCCAGTGAGGCTCCATCAGACTGTGCAAAGACAATA  349

seq1  GAGCAGGAGGACGGGTTTTTTTTTTTTTTTTTCCAAACAGCACTGAGTTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGAGGACGGGTTTTTTTTTTTTTTTTTCCAAACAGCACTGAGTTT  399

seq1  GCTACATATTGGCAGCTTCTCGTAATTTCCTTAATTTCAAAGAAAGTCAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACATATTGGCAGCTTCTCGTAATTTCCTTAATTTCAAAGAAAGTCAT  449

seq1  GGATCAAAGAGGCTGTCTGATTGTTGCATAAAATGAAAACTAATTCTTCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAAGAGGCTGTCTGATTGTTGCATAAAATGAAAACTAATTCTTCC  499

seq1  TCGGGGAATGTCGCTGTGAAGCCCCTTAAAAATTCTCCACTGGCCTCAGT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGAATGTCGCTGTGAAGCCCCTTAAAAATTCTCCACTGGCCTCAGT  549

seq1  ACAATGCTCAGGCTTATGGTTGAACTACAGCAACAAATTAGGGGCAATTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTCAGGCTTATGGTTGAACTACAGCAACAAATTAGGGGCAATTA  599

seq1  AATGTTTTCTCCTTTCCTGCACAGCCGAAACCGAAGCTGTGAAAAAAGGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTCTCCTTTCCTGCACAGCCGAAACCGAAGCTGTGAAAAAAGGG  649

seq1  CGTAGCTCAAGCAATTAATTGCCAAGAAATATTTAATAACCTTGCCTCTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGCTCAAGCAATTAATTGCCAAGAAATATTTAATAACCTTGCCTCTG  699

seq1  CTACATTAAACAGGAGGCATGAGATCTTCGTTCCAACTTAATCATGAAGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTAAACAGGAGGCATGAGATCTTCGTTCCAACTTAATCATGAAGT  749

seq1  TCCCTGAAGCCACGGGCAAGTCTCAGCAGCACACTAAAGGAAAAACTCCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGAAGCCACGGGCAAGTCTCAGCAGCACACTAAAGGAAAAACTCCA  799

seq1  AACACAGAGCTTATTTAATTTGCAACTCTTGCCACTTCGCCTCACACCTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGAGCTTATTTAATTTGCAACTCTTGCCACTTCGCCTCACACCTG  849

seq1  AATTC  849
      |||||
seq2  AATTC  854