BAC Information

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BAC

Clone NameB6Ng01-176K02
Chromosome10 (Build37)
Map Location 120,821,096 - 120,822,247
singlet/doubletsinglet
Overlap geneGns
Upstream geneHmga2, LOC100042902, Msrb3, LOC100043488, Lemd3, Wif1, LOC100042911, 4930505D03Rik, LOC100043498
Downstream geneRassf3, LOC100043500, Tbk1, Xpot, D930020B18Rik, BC048403, Srgap1, EG216394, LOC668272, Tmem5, LOC100043513, LOC668275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176K02.bB6Ng01-176K02.g
ACCGA004119GA004120
length1,146995
definitionB6Ng01-176K02.b B6Ng01-176K02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctcccctgacaactgtcaggcctcactccttgtttgactttat
aaggattttcccctcagaccctgtctctcctgagtatgcagatgaagtat
cttccgatacccctgtcctggccaattggacaggccccacatgctttccc
cagagagcctgcttagagaggtgaggcctctgaccttcccgcttgcgtgg
cacgagtcagcggcggagaagacggaacggtctgttcttcccgcagctgg
tggacacagtcactccgcttcctttcagtttctttctgacagaacatgat
gtcccaggtgccatgcttctcagaagggcaccacctacctactaatatgg
actttgcactcagatcaaaagccaacctcggtaagacacacttaagatct
gctgacctcccagctggcctgttgagaaagtgccgagacttgtaggacag
gtaggaaggccgttctacctttctggggacagtttaacagtgaagcacca
agaagctgaaataggaagcagggaaaggtggggaaggaggagtactggtg
ccctccaccaaccacagacagcccagagcacccactacccggatgtctgg
gccatcttgcggctttaaatgcaattatgtgtgtgttgcttttctctggt
ctcagagcttaggtgatgatgcaaaatcaggaggagagaagacatagccg
gggttgcctactgtcacctcctgaccactagggaaaagtgtttaggatca
ggcggccagcgcctctatgaacaaagtgcttcaacgagacaggctgggaa
agactgaaccaatggcagcgacagaagatgctgcacatcacgtgacagaa
agggacagaaggggacgtaagggaggggacatccctagatactcctcgct
cccgatggtgtagactcaggaacttgggaaataaaatcctacagttcagg
aaatgctagattcataaactactccctttaaggttaaataaacagcatca
gcaggtggaagagagcagattctcggtgggagccgtctgctttctggaga
gagccccagtgactgtctcatgaccacacccatctgtggagcaactgatg
atgaatgacatactgaattcaagagaaaaaccctttcttaaccaat
gaattccttaaagttgttgatgttaactgtggcgactccgtttgctttcc
tgaggaaagatgactaactcgggaccccatgtcgaaaagatttcatctgt
gacatgatgtcaagctgttcacaggtggcatcaaaagcaaaatccgtgcc
agaatgtaatgagaactggcttacagatttctcatttttactggatgtta
tggtttgtatatgctcagcccagggagtggcactattaggaggtgtggcc
ttgttggagtaggtgtgtcactgtgggcgtgggcttaagacccttcctca
tcctagttgcctgaaagccagtcttctcctagccgccttcagatgaagat
gtagaactctcagctcctcctgcaccatgcctgcctggatgctgccatgt
tcctgccttgatgagaatggactgaacctctgaacctgtaagccagcccc
aattaaatgttgtccttctcagagttgccttggtcatggcatctcttcac
ggcagtaaaaccctaactaggacactggatttaactactcacttcaacga
gttgaacatccatctctaaggcaaaggcagctaatcaatgtatcccctaa
gtcacgccagtgttccaacggaaactaaagctatggcatacttgaactga
ggcgatcttacgcatgctgacacatcagctaagcatctttcctgtggacc
ctgaaacctgcatcgccttgcttttctatgtggtaaaggaatttgaaaac
agacttcaggatatcctgggggaaaaaaaataacattttggtatacttgg
gactcgattttcagttgacgtaaatgacttatcagtcagttttcaaaggg
agtagagagcctgcccatctggtattgacttaaaccctttgatcgtgccc
ttcctagacttccccaggtcccggcttcccaggggcaactatcccttgat
tcacaaacatttcttactcggtcgtcacttgaaagagcacctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_120821096_120822247
seq2: B6Ng01-176K02.b_44_1189 (reverse)

seq1  ATTGGTTAAGAAAGTGTTTTCTCT-TTGATATCAGTA-GTCATCCTTCAT  48
      |||||||||||||| ||||| ||| ||||  |||||| ||||| | ||| 
seq2  ATTGGTTAAGAAAGGGTTTT-TCTCTTGAATTCAGTATGTCATTCATCA-  48

seq1  TCATGTTGGCTCACAGATGGGTGTTGGTTCATGAGACAGTTCACTGGGGC  98
      ||| ||||   |||||||||||||  | ||||||||||| ||||||||||
seq2  TCA-GTTGCTCCACAGATGGGTGT--GGTCATGAGACAG-TCACTGGGGC  94

seq1  TCTCTCCAGAAAGCAGACGGCT-CCACCGAGAATCTGCTCTCTTCCACCT  147
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCTCTCCAGAAAGCAGACGGCTCCCACCGAGAATCTGCTCTCTTCCACCT  144

seq1  GCTGATGCTTGTTTATTTAAACCTTAAAGGGAGTAGTTTATGAATCTTAG  197
      |||||||| ||||||||| ||||||||||||||||||||||||||| |||
seq2  GCTGATGC-TGTTTATTT-AACCTTAAAGGGAGTAGTTTATGAATC-TAG  191

seq1  CATTTCCTGAACTTGTAGGATTTTATTTCCCAAGTTCCTGAGTCTACA-C  246
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  CATTTCCTGAAC-TGTAGGATTTTATTTCCCAAGTTCCTGAGTCTACACC  240

seq1  ATCGGGAGCGAGGAGTATCTAGGGATGTCCCCTCCCTTACGTCCCCTTCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGGAGCGAGGAGTATCTAGGGATGTCCCCTCCCTTACGTCCCCTTCT  290

seq1  GTCCCCTTCTGTCACGTGATGTGCAGCATCTTCTGTCGCTGCCATTGGTT  346
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTTCTGTCACGTGATGTGCAGCATCTTCTGTCGCTGCCATTGGTT  340

seq1  CAGTCTTTCCCAGCCTGTCTCGTTGAAGCACTTTGTTCATAGAGGCGCTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTCCCAGCCTGTCTCGTTGAAGCACTTTGTTCATAGAGGCGCTG  390

seq1  GCCGCCTGATCCTAAACACTTTTCCCTAGTGGTCAGGAGGTGACAGTAGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCTGATCCTAAACACTTTTCCCTAGTGGTCAGGAGGTGACAGTAGG  440

seq1  CAACCCCGGCTATGTCTTCTCTCCTCCTGATTTTGCATCATCACCTAAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCGGCTATGTCTTCTCTCCTCCTGATTTTGCATCATCACCTAAGC  490

seq1  TCTGAGACCAGAGAAAAGCAACACACACATAATTGCATTTAAAGCCGCAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACCAGAGAAAAGCAACACACACATAATTGCATTTAAAGCCGCAA  540

seq1  GATGGCCCAGACATCCGGGTAGTGGGTGCTCTGGGCTGTCTGTGGTTGGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCCAGACATCCGGGTAGTGGGTGCTCTGGGCTGTCTGTGGTTGGT  590

seq1  GGAGGGCACCAGTACTCCTCCTTCCCCACCTTTCCCTGCTTCCTATTTCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGCACCAGTACTCCTCCTTCCCCACCTTTCCCTGCTTCCTATTTCA  640

seq1  GCTTCTTGGTGCTTCACTGTTAAACTGTCCCCAGAAAGGTAGAACGGCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTGGTGCTTCACTGTTAAACTGTCCCCAGAAAGGTAGAACGGCCT  690

seq1  TCCTACCTGTCCTACAAGTCTCGGCACTTTCTCAACAGGCCAGCTGGGAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCTGTCCTACAAGTCTCGGCACTTTCTCAACAGGCCAGCTGGGAG  740

seq1  GTCAGCAGATCTTAAGTGTGTCTTACCGAGGTTGGCTTTTGATCTGAGTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCAGATCTTAAGTGTGTCTTACCGAGGTTGGCTTTTGATCTGAGTG  790

seq1  CAAAGTCCATATTAGTAGGTAGGTGGTGCCCTTCTGAGAAGCATGGCACC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCCATATTAGTAGGTAGGTGGTGCCCTTCTGAGAAGCATGGCACC  840

seq1  TGGGACATCATGTTCTGTCAGAAAGAAACTGAAAGGAAGCGGAGTGACTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACATCATGTTCTGTCAGAAAGAAACTGAAAGGAAGCGGAGTGACTG  890

seq1  TGTCCACCAGCTGCGGGAAGAACAGACCGTTCCGTCTTCTCCGCCGCTGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACCAGCTGCGGGAAGAACAGACCGTTCCGTCTTCTCCGCCGCTGA  940

seq1  CTCGTGCCACGCAAGCGGGAAGGTCAGAGGCCTCACCTCTCTAAGCAGGC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGCCACGCAAGCGGGAAGGTCAGAGGCCTCACCTCTCTAAGCAGGC  990

seq1  TCTCTGGGGAAAGCATGTGGGGCCTGTCCAATTGGCCAGGACAGGGGTAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGGGAAAGCATGTGGGGCCTGTCCAATTGGCCAGGACAGGGGTAT  1040

seq1  CGGAAGATACTTCATCTGCATACTCAGGAGAGACAGGGTCTGAGGGGAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGATACTTCATCTGCATACTCAGGAGAGACAGGGTCTGAGGGGAAA  1090

seq1  ATCCTTATAAAGTCAAACAAGGAGTGAGGCCTGACAGTTGTCAGGGGAGG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTATAAAGTCAAACAAGGAGTGAGGCCTGACAGTTGTCAGGGGAGG  1140

seq1  GAATTC  1152
      ||||||
seq2  GAATTC  1146