BAC Information

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BAC

Clone NameB6Ng01-177D08
Chromosome10 (Build37)
Map Location 52,019,636 - 52,020,467
singlet/doubletsinglet
Overlap geneDcbld1
Upstream geneLOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik, Vgll2, Ros1
Downstream geneGopc, LOC625811, EG668294, Nepn, D10Ertd438e, EG629689, Zfa, Slc35f1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177D08.bB6Ng01-177D08.g
ACCGA004540GA004541
length297832
definitionB6Ng01-177D08.b B6Ng01-177D08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttataggaatataaaatgattattatttttaatttatttttatt
agatattttcttcatttacatttcaaatgctatcccctttcctagtttcc
tctccgaaagtcccctacacgctcccccctccccttgctccacaacccaa
ccactcctgcttcctagccctggcattcccctatacgggggcatataatc
ttcgaaagaccaacggtctctcctcccattgatggtcgactgggccatcc
tctgctacttatgcagctagagacaggagctctgggggtactggtta
gaattctctgtgtagcccaggccaactttgaaactgaaactctcttgtca
actggacagtgatgagagtgattttcatatttcctaaatatatgcaaata
gtatatagacataaatatacatttaaaaattaaagaataaaaatgtgtat
gtattcccctagctccttcaggaattataatgctgttgtttcagctgagt
taattaatgaatattgtctaaggcaaatcactaatcaacatacactggta
atatagtttgcccataatgcatttgacttagactgtgccacatctgcact
gcagactaccaaggaaatcaaaccattagttgttcaaaggggaggttgtt
gttgttgttgttttaatcagatttaatgaagttgaatttttaaacttgat
accaggggagaaaaacacactcataagcatgaattatgtttcaattgtag
gatgaggaagtcttttttattttaataaagaaataattgtggagaaggtt
attaaccagaataattgaatggacagatctggtggctagtctcatgaata
tgtatcccatgctctgcattaaatatagggaaatcaacctacagttcaaa
tcttacttaataggagtctggaccatgggtaaaccagaatattttgtgat
ggacattgttgctcaatgtcctctatctactctgtccgtcacagcaagtt
ctgtagagcacatggctcctggaatgttcacttcattactggtagaattc
tgtggaagaaactcttctaagcagttggaatatctgatcagtagaccaca
actaatttgcatctattctggggcatgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_52019636_52020467
seq2: B6Ng01-177D08.g_68_899

seq1  GAATTCTCTGTGTAGCCCAGGCCAACTTTGAAACTGAAACTCTCTTGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTGTAGCCCAGGCCAACTTTGAAACTGAAACTCTCTTGTCA  50

seq1  ACTGGACAGTGATGAGAGTGATTTTCATATTTCCTAAATATATGCAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACAGTGATGAGAGTGATTTTCATATTTCCTAAATATATGCAAATA  100

seq1  GTATATAGACATAAATATACATTTAAAAATTAAAGAATAAAAATGTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATAGACATAAATATACATTTAAAAATTAAAGAATAAAAATGTGTAT  150

seq1  GTATTCCCCTAGCTCCTTCAGGAATTATAATGCTGTTGTTTCAGCTGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCCCTAGCTCCTTCAGGAATTATAATGCTGTTGTTTCAGCTGAGT  200

seq1  TAATTAATGAATATTGTCTAAGGCAAATCACTAATCAACATACACTGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATGAATATTGTCTAAGGCAAATCACTAATCAACATACACTGGTA  250

seq1  ATATAGTTTGCCCATAATGCATTTGACTTAGACTGTGCCACATCTGCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTTGCCCATAATGCATTTGACTTAGACTGTGCCACATCTGCACT  300

seq1  GCAGACTACCAAGGAAATCAAACCATTAGTTGTTCAAAGGGGAGGTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTACCAAGGAAATCAAACCATTAGTTGTTCAAAGGGGAGGTTGTT  350

seq1  GTTGTTGTTGTTTTAATCAGATTTAATGAAGTTGAATTTTTAAACTTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTTGTTTTAATCAGATTTAATGAAGTTGAATTTTTAAACTTGAT  400

seq1  ACCAGGGGAGAAAAACACACTCATAAGCATGAATTATGTTTCAATTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGGAGAAAAACACACTCATAAGCATGAATTATGTTTCAATTGTAG  450

seq1  GATGAGGAAGTCTTTTTTATTTTAATAAAGAAATAATTGTGGAGAAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGAAGTCTTTTTTATTTTAATAAAGAAATAATTGTGGAGAAGGTT  500

seq1  ATTAACCAGAATAATTGAATGGACAGATCTGGTGGCTAGTCTCATGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACCAGAATAATTGAATGGACAGATCTGGTGGCTAGTCTCATGAATA  550

seq1  TGTATCCCATGCTCTGCATTAAATATAGGGAAATCAACCTACAGTTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCCATGCTCTGCATTAAATATAGGGAAATCAACCTACAGTTCAAA  600

seq1  TCTTACTTAATAGGAGTCTGGACCATGGGTAAACCAGAATATTTTGTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTTAATAGGAGTCTGGACCATGGGTAAACCAGAATATTTTGTGAT  650

seq1  GGACATTGTTGCTCAATGTCCTCTATCTACTCTGTCCGTCACAGCAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTGTTGCTCAATGTCCTCTATCTACTCTGTCCGTCACAGCAAGTT  700

seq1  CTGTAGAGCACATGGCTCCTGGAATGTTCACTTCATTACTGGTAGAATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAGCACATGGCTCCTGGAATGTTCACTTCATTACTGGTAGAATTC  750

seq1  TGTGGAAGAAACTCTTCTAAGCAGTTGGAATATCTGATCAGTAGACCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGAAACTCTTCTAAGCAGTTGGAATATCTGATCAGTAGACCACA  800

seq1  ACTAATTTGCATCTATTCTGGGGCATGGGGGG  832
      ||||||||||||||||||||||||||||||||
seq2  ACTAATTTGCATCTATTCTGGGGCATGGGGGG  832