BAC Information

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BAC

Clone NameB6Ng01-177F21
Chromosome10 (Build37)
Map Location 98,968,420 - 98,969,350
singlet/doubletsinglet
Overlap genenone
Upstream geneEG432494, Atp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222, Gad1-ps, LOC100042232
Downstream geneLOC667502, Csl, LOC100042246, Kitl, LOC100043208, LOC100043211, EG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177F21.bB6Ng01-177F21.g
ACCGA004656GA004657
length9291,126
definitionB6Ng01-177F21.b B6Ng01-177F21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtatatctgatgaattcatgaaaggccaggaacaatagagatt
agtggaccaagggaagaggagcctgagacacagtggcagatgttggtggg
agcagaaccactcggtgtattggacaccatggtaaagtccttgtctctgt
ctccaaagcatctcaaaggctttgaatgagcttgaatcaggaagtggttt
cctctttgaatctgttgggacatgcaagaaaagaagtaggacatctgcta
ggggactcctagagctgtccagatgcatgtggggggtgccttgggttacg
gtggtgggaagctgtgggaactgagctgtaagatgaacaacagtcagccc
tgtaggcttttgtggatcattgacttggtataagatgcaacgatggggat
gatctgcctgatttctaggattctgtctagagtatgtttatggttctgcc
ctttccctcaggagaaatcgatttgaaagggaagtgtatttgttctgatt
tggatatgttatactaagtagtagatggcttggtgaacactttactctaa
agatagatacttggcaaaaaggatgaacgttgatgtccttaaaagacatc
taagaccacaggaataaatgagatgcctcggatggtgggcagtaccattc
caagaagatatcccaaaacatcataaataaaacctagctatgtgtcagtt
ggcctgggggctagctataaacagcatcctccattgctcctgttaacatc
aattgtgtgggatgaaagagtaagggagagagtaaggaggcttgtcttcc
tggcctgactccttcatgatggaccatgacctgggagtgcaagccaaata
cacttgtttctcctttacgtggattttagtcagagaatctgtgacaagca
atagaaaaatgagcgtttgttcagtgtgt
gaattcaggggtaagaaacctgttgtgaagtatgcacaagactgcacgtg
ctttgtgattctatttatataaaatatctagaatagatagagacacatga
tagaaatatctatcatagaacacatagccagaccacagactggccatcct
cctgactgtggaggagaaggtgacaaggttgactttgatgtccacggata
tgggtcgtgactgcccagaatagtccactttgaaatggttctctttacgt
tatagagtttcatctccagggaagagggaggagcaggttggtctggtgct
gctgtgtatacaaatgctaaattctgatcccaagacctggttgcccccat
aagagtggattttcacgtataacagcctttgttgtgtaaactttgctccc
catttcaagctattggctaaataagagtggctacagccaataactgggga
gaatagagctaggcagggctttggttactctttgggggtctcagataggg
acctaaacagagggagagaaaaagaaagaagactgagagaggaggaggtc
accacgagaggagatggactatgaacagtggccaggctaagtccatcctg
agaacatgttgatggatcaaaaaggcagcccaggggagactcaacagcaa
gtaacatggggagtgcagctgggaattagctggtctagtatgtattaatt
gtgctaagctgattaaataaatcagcaggactatgtttcaattatggggg
ctggactggtcatataacgaactaatagagttcaggctagacgaaatggc
tcataggttaagagcactgaccgctcttccagagatcctgagttcaattc
ctaggaaccacatggtggcctcacactattctgtatgagatctgaagccc
tctttctggtgtgtctgaagacagacagcaacatgttactcacatatatt
cactcattaatcttttttagagaagagagaaagacctagagagtcattat
aatcgctaccacaggaccagtcaccgaagatggtaaaccattgacccgac
tgcagctactatagatcataatgtaaaacgattgaaccagacatggtagc
agttccgagacaggaacatatatagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_98968420_98969350
seq2: B6Ng01-177F21.b_45_973

seq1  GAATTCAGTATATCTGATGAATTCATGAAAGGCCAGGAACAATAGAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTATATCTGATGAATTCATGAAAGGCCAGGAACAATAGAGATT  50

seq1  AGTGGACCAAGGGAAGAGGAGCCTGAGACACAGTGGCAGATGTTGGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGACCAAGGGAAGAGGAGCCTGAGACACAGTGGCAGATGTTGGTGGG  100

seq1  AGCAGAACCACTCGGTGTATTGGACACCATGGTAAAGTCCTTGTCTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAACCACTCGGTGTATTGGACACCATGGTAAAGTCCTTGTCTCTGT  150

seq1  CTCCAAAGCATCTCAAAGGCTTTGAATGAGCTTGAATCAGGAAGTGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAGCATCTCAAAGGCTTTGAATGAGCTTGAATCAGGAAGTGGTTT  200

seq1  CCTCTTTGAATCTGTTGGGACATGCAAGAAAAGAAGTAGGACATCTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTGAATCTGTTGGGACATGCAAGAAAAGAAGTAGGACATCTGCTA  250

seq1  GGGGACTCCTAGAGCTGTCCAGATGCATGTGGGGGGTGCCTTGGGTTACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTCCTAGAGCTGTCCAGATGCATGTGGGGGGTGCCTTGGGTTACG  300

seq1  GTGGTGGGAAGCTGTGGGAACTGAGCTGTAAGATGAACAACAGTCAGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGGAAGCTGTGGGAACTGAGCTGTAAGATGAACAACAGTCAGCCC  350

seq1  TGTAGGCTTTTGTGGATCATTGACTTGGTATAAGATGCAACGATGGGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCTTTTGTGGATCATTGACTTGGTATAAGATGCAACGATGGGGAT  400

seq1  GATCTGCCTGATTTCTAGGATTCTGTCTAGAGTATGTTTATGGTTCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCCTGATTTCTAGGATTCTGTCTAGAGTATGTTTATGGTTCTGCC  450

seq1  CTTTCCCTCAGGAGAAATCGATTTGAAAGGGAAGTGTATTTGTTCTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTCAGGAGAAATCGATTTGAAAGGGAAGTGTATTTGTTCTGATT  500

seq1  TGGATATGTTATACTAAGTAGTAGATGGCTTGGTGAACACTTTACTCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATGTTATACTAAGTAGTAGATGGCTTGGTGAACACTTTACTCTAA  550

seq1  AGATAGATACTTGGCAAAAAGGATGAACGTTGATGTCCTTAAAAGACATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATACTTGGCAAAAAGGATGAACGTTGATGTCCTTAAAAGACATC  600

seq1  TAAGACCACAGGAATAAATGAGATGCCTCGGATGGTGGGCAGTACCATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCACAGGAATAAATGAGATGCCTCGGATGGTGGGCAGTACCATTC  650

seq1  CAAGAAGATATCCCAAAACATCATAAATAAAACCTAGCTATGTGTCAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGATATCCCAAAACATCATAAATAAAACCTAGCTATGTGTCAGTT  700

seq1  GGCCTGGGGGCTAGCTATAAACAGCATCCTCCATTGCTCCTGTTAACATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGGGGGCTAGCTATAAACAGCATCCTCCATTGCTCCTGTTAACATC  750

seq1  AATTGTGTGGGATGAAAGAGTAAGGGAGAGAGTAAGGAGGCTTGTCTTCC  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AATTGTGTGGGATGAAAGAGTAAGGGAGAGAGTAAGGAGGCTTGTCTT-C  799

seq1  CTGGCCTGAACTCCTTCAATGATGGACCATGACCTGGGAGTGCAAGCCAA  850
      |||||||| |||||||| ||||||||||||||||||||||||||||||||
seq2  CTGGCCTG-ACTCCTTC-ATGATGGACCATGACCTGGGAGTGCAAGCCAA  847

seq1  ATACACTTGTTTCTCCTTTACGTGGATTTTAGTCAGAGTATCTGTGAC-A  899
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  ATACACTTGTTTCTCCTTTACGTGGATTTTAGTCAGAGAATCTGTGACAA  897

seq1  GCAATAGAAACATGAGCGTTTGTTCAGTGTGT  931
      |||||||||| |||||||||||||||||||||
seq2  GCAATAGAAAAATGAGCGTTTGTTCAGTGTGT  929