BAC Information

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BAC

Clone NameB6Ng01-177G23
Chromosome10 (Build37)
Map Location 123,984,525 - 124,095,436
singlet/doubletdoublet
Overlap genenone
Upstream geneAI851790, 4930503E24Rik
Downstream geneLOC671416, Slc16a7, LOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177G23.bB6Ng01-177G23.g
ACCGA004705GA004706
length1,0111,080
definitionB6Ng01-177G23.b B6Ng01-177G23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,984,525 - 123,985,086)(124,094,383 - 124,095,436)
sequence
gaattcagagctagtataccagagtatagcagtgattgtggcctatgaag
aaccaatgtcagagtgctggctggttttgtgtgtcaacttgatacaagct
ggagttatcacagagaaaggagcatactttgaggtaatgcctctttgaga
tccagctataaggcattttttcaattagtgatcaaatgtgggagggctca
tgtgggtggcaccatctgtgggctgataatcttggattctataagaaagc
aagctgatttacgataggtaaagatcctttctcaatcagttggggacctt
tttgttttattgttggtgtcttttgccttacagaagctttgcaattttat
gaagtcccatttgtcaattctaaatcttagagcacaagtcattgctgttc
tattcaggatttttttcccctgtgcccatatcttcgaggcttttccccac
tttctcctctataactttcactgtctctggttttatgtggagttccttga
tccaattagatttgaccttagtataaggagataagaatggatcaatttgc
attattctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtccaagatcaagt
gaccataggtgtgtgggttcacttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattcgaccagaggtcttttt
atccttgagaagagtttttgctatcctagggtgtttgttattccagatga
atttgcagattgctctttctaattcgttaaagaattgagttggaattttg
atggggattgcattgaatctgtagattgctttttacaaatagccattttt
gttatagtgatccttgcaaatccatgagcatgggagatctttccatcttt
ctgagatcttc

gaattcattgtatttgaggacacagcacacaaagtccttgttttcatggt
gagagtcttgaaaatggaaagacggagagtcttctctgtgaaaatggcat
ctatttatgaaaaggtaacatgagtaaaagggagaaaggagagtggcaca
ttagggaatgagtgttgggtgtgagcacagattttgaagggtggtcgttg
aaatgaagtagtacttggagcttggatacccatgacagatagtaagtatt
catgaaacttggtgggttgggaaaagcagtatggaggctggtcagcactc
agaaaatcttgggttgtctataagctgtccgtttataaactttagaagct
gtcagtgtgggcatggtggtgcctgtggtgctggctagaatggccataag
tttgtttactaggatcatattctaattaggatgcaagagacatgtaggaa
gaaggtgaaattttatcaggtttgagggtttcctggagaaatttgttagg
atagcagtttaaattaagagaatttcagttgtgtttcaatacagttgaaa
cacaccaaacaacattctaacatttgtgaatgagtcttcccactatatca
taaattaaggtgtcagctgatttttaaaccataagacaccctactgtcta
taaagccataagacatgtcaccccactcactatctttacagacataagac
ataagatagtccagtattggtcctattatgtcattgccatttgggttttg
attcactttgttggcttgccaggaggattgaagtaggaagattttttgtc
cctacacagcttgggaggaggagaaaaattatcactcatcttaatgaaat
ataccattcacccttttttaaactaacattctaaaaattacaagcccaag
aactaccagtgctgccctcttctctaagtgaagctgaattcctctagttt
tgcagtatgtactccacatatcacagtaaaacaaaaccaggactttttgg
gggttcttttatgctgttgtattctttcctcagaatgaaagaattccctc
tgggatcctgcagaattgcaatggatacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123984525_123985086
seq2: B6Ng01-177G23.b_45_606

seq1  GAATTCAGAGCTAGTATACCAGAGTATAGCAGTGATTGTGGCCTATGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCTAGTATACCAGAGTATAGCAGTGATTGTGGCCTATGAAG  50

seq1  AACCAATGTCAGAGTGCTGGCTGGTTTTGTGTGTCAACTTGATACAAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATGTCAGAGTGCTGGCTGGTTTTGTGTGTCAACTTGATACAAGCT  100

seq1  GGAGTTATCACAGAGAAAGGAGCATACTTTGAGGTAATGCCTCTTTGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTATCACAGAGAAAGGAGCATACTTTGAGGTAATGCCTCTTTGAGA  150

seq1  TCCAGCTATAAGGCATTTTTTCAATTAGTGATCAAATGTGGGAGGGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTATAAGGCATTTTTTCAATTAGTGATCAAATGTGGGAGGGCTCA  200

seq1  TGTGGGTGGCACCATCTGTGGGCTGATAATCTTGGATTCTATAAGAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTGGCACCATCTGTGGGCTGATAATCTTGGATTCTATAAGAAAGC  250

seq1  AAGCTGATTTACGATAGGTAAAGATCCTTTCTCAATCAGTTGGGGACCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGATTTACGATAGGTAAAGATCCTTTCTCAATCAGTTGGGGACCTT  300

seq1  TTTGTTTTATTGTTGGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTATTGTTGGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTAT  350

seq1  GAAGTCCCATTTGTCAATTCTAAATCTTAGAGCACAAGTCATTGCTGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCCATTTGTCAATTCTAAATCTTAGAGCACAAGTCATTGCTGTTC  400

seq1  TATTCAGGATTTTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTCCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGGATTTTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTCCCCAC  450

seq1  TTTCTCCTCTATAACTTTCACTGTCTCTGGTTTTATGTGGAGTTCCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTCTATAACTTTCACTGTCTCTGGTTTTATGTGGAGTTCCTTGA  500

seq1  TCCAATTAGATTTGACCTTAGTATAAGGAGATAAGAATGGATCAATTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTAGATTTGACCTTAGTATAAGGAGATAAGAATGGATCAATTTGC  550

seq1  ATTATTCTACAT  562
      ||||||||||||
seq2  ATTATTCTACAT  562


seq1: chr10_124094383_124095436
seq2: B6Ng01-177G23.g_65_1144 (reverse)

seq1  TGGTAT-CATTGCA--TCTGCAGG-TACCAGAGG--AT--CTTCA-TCTG  41
      |||||| |||||||  |||||||| | |||||||  ||   |||| ||||
seq2  TGGTATCCATTGCAATTCTGCAGGATCCCAGAGGGAATTCTTTCATTCTG  50

seq1  AGAAAAGAATACAACAG-ATAAAAGAACCCC--AAAAGTCCTG--TTTGT  86
      || |||||||||||||| |||||||||||||  ||||||||||  |||||
seq2  AGGAAAGAATACAACAGCATAAAAGAACCCCCAAAAAGTCCTGGTTTTGT  100

seq1  TTTACTGTGATATGGTGAGTACATACTGCAAAACTAGAGGAA-TCAGC-T  134
      ||||||||||||||  |||||||||||||||||||||||||| ||||| |
seq2  TTTACTGTGATATGTGGAGTACATACTGCAAAACTAGAGGAATTCAGCTT  150

seq1  CAC-TAGAGAAGAGGGCAGCACTGGTAG-TCTTGGGCTTGTAA-TTTTAG  181
      ||| |||||||||||||||||||||||| |||||||||||||| ||||||
seq2  CACTTAGAGAAGAGGGCAGCACTGGTAGTTCTTGGGCTTGTAATTTTTAG  200

seq1  AATG-TAGTTTAAAAAAGGGTGAATGGTATA-TTCATT-AGATGAGTGAT  228
      |||| |||||||||||||||||||||||||| |||||| |||||||||||
seq2  AATGTTAGTTTAAAAAAGGGTGAATGGTATATTTCATTAAGATGAGTGAT  250

seq1  A--TTTTCTCCTCCTCCCAAGCTGTGTA-GGAC-AAAAATCTTCCTACTT  274
      |  ||||||||||||||||||||||||| |||| ||||||||||||||||
seq2  AATTTTTCTCCTCCTCCCAAGCTGTGTAGGGACAAAAAATCTTCCTACTT  300

seq1  CAATCCTCCTGGCAAGCCAACAAAGTGAATCAAAACCCAAATGGCAATGA  324
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTCCTGGCAAGCCAACAAAGTGAATCAAAACCCAAATGGCAATGA  350

seq1  CATAATAGGACCAATACTGGACTATCTTATGTCTTATGTCTGTAAAGATA  374
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAGGACCAATACTGGACTATCTTATGTCTTATGTCTGTAAAGATA  400

seq1  GTGAGTGGGGTGACATGTCTTATGGCTTTATAGACAGTAGGGTGTCTTAT  424
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGGGGTGACATGTCTTATGGCTTTATAGACAGTAGGGTGTCTTAT  450

seq1  GGTTTAAAAATCAGCTGACACCTTAATTTATGATATAGTGGGAAGACTCA  474
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAAAAATCAGCTGACACCTTAATTTATGATATAGTGGGAAGACTCA  500

seq1  TTCACAAATGTTAGAATGTTGTTTGGTGTGTTTCAACTGTATTGAAACAC  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAATGTTAGAATGTTGTTTGGTGTGTTTCAACTGTATTGAAACAC  550

seq1  AACTGAAATTCTCTTAATTTAAACTGCTATCCTAACAAATTTCTCCAGGA  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAATTCTCTTAATTTAAACTGCTATCCTAACAAATTTCTCCAGGA  600

seq1  AACCCTCAAACCTGATAAAATTTCACCTTCTTCCTACATGTCTCTTGCAT  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCAAACCTGATAAAATTTCACCTTCTTCCTACATGTCTCTTGCAT  650

seq1  CCTAATTAGAATATGATCCTAGTAAACAAACTTATGGCCATTCTAGCCAG  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATTAGAATATGATCCTAGTAAACAAACTTATGGCCATTCTAGCCAG  700

seq1  CACCACAGGCACCACCATGCCCACACTGACAGCTTCTAAAGTTTATAAAC  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAGGCACCACCATGCCCACACTGACAGCTTCTAAAGTTTATAAAC  750

seq1  GGACAGCTTATAGACAACCCAAGATTTTCTGAGTGCTGACCAGCCTCCAT  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCTTATAGACAACCCAAGATTTTCTGAGTGCTGACCAGCCTCCAT  800

seq1  ACTGCTTTTCCCAACCCACCAAGTTTCATGAATACTTACTATCTGTCATG  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTTCCCAACCCACCAAGTTTCATGAATACTTACTATCTGTCATG  850

seq1  GGTATCCAAGCTCCAAGTACTACTTCATTTCAACGACCACCCTTCAAAAT  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCAAGCTCCAAGTACTACTTCATTTCAACGACCACCCTTCAAAAT  900

seq1  CTGTGCTCACACCCAACACTCATTCCCTAATGTGCCACTCTCCTTTCTCC  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTCACACCCAACACTCATTCCCTAATGTGCCACTCTCCTTTCTCC  950

seq1  CTTTTACTCATGTTACCTTTTCATAAATAGATGCCATTTTCACAGAGAAG  974
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACTCATGTTACCTTTTCATAAATAGATGCCATTTTCACAGAGAAG  1000

seq1  ACTCTCCGTCTTTCCATTTTCAAGACTCTCACCATGAAAACAAGGACTTT  1024
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCGTCTTTCCATTTTCAAGACTCTCACCATGAAAACAAGGACTTT  1050

seq1  GTGTGCTGTGTCCTCAAATACAATGAATTC  1054
      ||||||||||||||||||||||||||||||
seq2  GTGTGCTGTGTCCTCAAATACAATGAATTC  1080


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