BAC Information

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BAC

Clone NameB6Ng01-178G03
Chromosome10 (Build37)
Map Location 103,879,570 - 103,880,141
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc6a15, EG667697, LOC667701, EG627488, EG667692, EG667695, LOC100043292
Downstream geneLOC100042383, Tmtc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178G03.bB6Ng01-178G03.g
ACCGA005388GA005389
length1,0411,203
definitionB6Ng01-178G03.b B6Ng01-178G03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcagttttcttattcctataatttattgggatctaaagactt
tattctttttagtttttaaaactagttcactgagaacctcatacaatggt
tttgatcatattcagttcctcaactaacaaatccattctcccctttgtta
cccaccctaatttatttatacacttattaatgcattttttgaaaaatcca
ttgatatcaattcatgttgattctgtgatcttagatgtatgacttttcac
tggggtgtagttgacttgccagggtctacattcttaactaaaactgactc
tccctctgccagaagctttcaattaattgccaatcgtttctcagctggtg
ttaaacatccatgctcttctcttcctatcctgggcttggtatggaccaat
agcgcacatctgttataggtgctgtcataactaactactgtttcatcata
tgtcccacttttgagctctatccagaagacaatttccttgtattcagctc
ccatctcttgcatttgcattcttctgtactgtctttcacaatgatctctg
agcctcagagttcaactaatggagatgtctcacgagagctgagcattcca
tagggtcctaatctttcacatttgccatctactgaaaatggaagtttctc
agacaaaggttaagaaatgtatcaatataatggcattgaaccaatgacaa
tgacaatgaaatgacattaggagacttttaacactatgtgcatttagcag
tatagtattcacagggtttccactagctcctgtcacctaaccatgtatct
ttagttcaataattgtaccaggaatggctttcatcatgtagagcagggta
taaacccagtcagattatgatgttggtgtcactaatacagcagtgggcat
gtgttgctaggttagatgttatggtgcagctcatagggttccttgctgcg
taagacggatgtttactttttttttctccatgatatcatgcatagctcca
tccagtcccagaaagctagccagtagaatgaaattccagct

gaattcagaactcttcagctggggaatggtggtaatgaagtgttcccgta
aaacagactgttgagaaggattcaactgcgtgaattcagaactcttcagc
tggggaacggtggtaataaagtgttcccacaacaaagactgttgagaagg
attcaactgcgtgaattcagaactcttcagctggggaacagggtacccgt
aagtatagctttataaggtaagtctggccttgaactttctaacgaaagtc
aagacagtctatcagaagtaaagtgggaaatagctttacaaggtatgttt
gaccttgaactttctctagtgttaggagcccttttgttccttttcacatg
ttatcaagtggttaaggcagggctgaaaattctggatgaaattcagggca
atctatcagaagtaaagcggggagagagagtaggagcaaagaggaaatat
ggtacacaaaataagtatacaggcctttccacgggtcttgaacctgagga
aaagtttaggtcaggtaagaatacctggggagagattagaaggaaggaga
aggaaaaagaaaagaaaaaagatcaattagcggaggtctctaggagaagg
agcctatactcatcactaggtgagctcaaggagccagttcttaatagttc
tgaatcagatgaaaaggctattagggcctggaaggcgctctcccgagcag
gtgaagccactggacaactaacaaagatcgtccagagacctcaggagtca
ttctcagattttgtggccagaatgacagaggcagcagagtgtatttttgc
aaatttggagcaagccgcacctctggtagaatagcttatttatgagcaag
ccacgcaggaatgcagagcggccatagccccaagaaagaacaaaggttta
caaaactggcttagggtttgtcgggagcttgggggacctctcattatgcg
ttacttccattcagtatgagaaatttactagggcagctaatttgtcaaaa
agtcttttcttcagtatatgttacagatgaccgctgaatttgaacagacc
cttcgggatgagaatgcatcattcaggtcactcacatgctgacctgtcct
gatcaaagataccatgattcccctcagcatttctcggtagaatgggtggc
atggaatatatccgagaatcaccattcgtgcgtgtggaaatagtgagttg
tgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103879570_103880141
seq2: B6Ng01-178G03.b_42_613

seq1  GAATTCAATCAGTTTTCTTATTCCTATAATTTATTGGGATCTAAAGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCAGTTTTCTTATTCCTATAATTTATTGGGATCTAAAGACTT  50

seq1  TATTCTTTTTAGTTTTTAAAACTAGTTCACTGAGAACCTCATACAATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTTTAGTTTTTAAAACTAGTTCACTGAGAACCTCATACAATGGT  100

seq1  TTTGATCATATTCAGTTCCTCAACTAACAAATCCATTCTCCCCTTTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCATATTCAGTTCCTCAACTAACAAATCCATTCTCCCCTTTGTTA  150

seq1  CCCACCCTAATTTATTTATACACTTATTAATGCATTTTTTGAAAAATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCTAATTTATTTATACACTTATTAATGCATTTTTTGAAAAATCCA  200

seq1  TTGATATCAATTCATGTTGATTCTGTGATCTTAGATGTATGACTTTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATCAATTCATGTTGATTCTGTGATCTTAGATGTATGACTTTTCAC  250

seq1  TGGGGTGTAGTTGACTTGCCAGGGTCTACATTCTTAACTAAAACTGACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGTAGTTGACTTGCCAGGGTCTACATTCTTAACTAAAACTGACTC  300

seq1  TCCCTCTGCCAGAAGCTTTCAATTAATTGCCAATCGTTTCTCAGCTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTGCCAGAAGCTTTCAATTAATTGCCAATCGTTTCTCAGCTGGTG  350

seq1  TTAAACATCCATGCTCTTCTCTTCCTATCCTGGGCTTGGTATGGACCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACATCCATGCTCTTCTCTTCCTATCCTGGGCTTGGTATGGACCAAT  400

seq1  AGCGCACATCTGTTATAGGTGCTGTCATAACTAACTACTGTTTCATCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCACATCTGTTATAGGTGCTGTCATAACTAACTACTGTTTCATCATA  450

seq1  TGTCCCACTTTTGAGCTCTATCCAGAAGACAATTTCCTTGTATTCAGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCACTTTTGAGCTCTATCCAGAAGACAATTTCCTTGTATTCAGCTC  500

seq1  CCATCTCTTGCATTTGCATTCTTCTGTACTGTCTTTCACAATGATCTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTTGCATTTGCATTCTTCTGTACTGTCTTTCACAATGATCTCTG  550

seq1  AGCCTCAGAGTTCAACTAATGG  572
      ||||||||||||||||||||||
seq2  AGCCTCAGAGTTCAACTAATGG  572


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