BAC Information

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BAC

Clone NameB6Ng01-179C11
Chromosome10 (Build37)
Map Location 97,559,826 - 97,767,565
singlet/doubletdoublet
Overlap geneEG667438
Upstream geneEG667407, Dcn, Lum, Kera, Epyc, 4921510H08Rik
Downstream geneEG432494, Atp2b1, Wdr51b, Galnt4, Dusp6, LOC100042222
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179C11.bB6Ng01-179C11.g
ACCGA005952GA005953
length1,187716
definitionB6Ng01-179C11.b B6Ng01-179C11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,766,377 - 97,767,565)(97,559,826 - 97,560,541)
sequence
gaattctgtgcctttctgggattcctaggtcttataggtttcctgaggtc
ctggaggtacttagaattttaatcttcagttcttcttccaacaacctata
ttccaattcaaagctacacaaagtgatcacatatagtcacaaattatgtg
cttctaaaacaacccatgttctctgacacttgctgatcatattttattct
gatgaaatcattttgactttgtaattgttactgggatttctcaacttagt
gacttggtaggtggctcagaaactcacttgtgatgaggttcaatgtacac
agtcatttggaaacctgaggtcaaggaattccttctgaaggacatggtag
tgtactaaaggttatttcctcaaggagtagaatttcatagtatgaataga
atgaccttacactacaaccaggacatgtattaatagtcttcctttgtggc
ttggagctgtcttctcttttcccagtgcatactccatctaggtaaatttt
tatagtagctacactgaaataaaactgatgcatattcatggaataccata
tatattgatcaatactaacgaatgaaacaacacacatttaggtccaccaa
aaacaaaacaaaacaaaacaaaacaaaaacaacaacaacaaaaaaccaaa
ccaaaccaacccccccccaaaaaatagaccatactaagttaaaaaaaatt
ttaatagagcatatctagcatagttgtgcaaaagaggtgcacacctgaag
aaaactgactctctgttccatacagctttcagttgccaatagctgctcag
ctatggggggaaattcatgaactcttcttccactgacatggagacttttg
attgtctatttttctgcaggtcttgtaattcagttaatatttattaggtt
tatgtgtacaatgaccagttcatgtctagtaatgcttctcaggataacat
ctgctacttatgcctctacaatcttgtgccctctgaaccctgtagatggt
tcttccccatgaacattactgccccagtggagtgtcttgggactttaatt
tttcttatcaagattgtaaatttgggatagaatgggaaaggaaagtacga
taacattatctgcccatgtactgattttcacactgataatagtcttttta
tagtaagtgagagaggaaagtctgattacttataaag

gaattctctgagctaaggggcatctttgggatgcaggaaattatcctcat
gctttcacaagcacttgtgggctgcacaaattttggattttttttttatt
ttattttttttatttttttagaaattgaaagaaactgctgaactttactg
gaaacatttaataacctcatgcaaataatgggcctaatgcttagcattaa
gaaacccaactctctaattgtaggccttatggttaatacgtatttggaaa
aaacttgtagttgaaccaataattattatcgtgtatatatttgaccatcc
acaattttctataggtgtggataaagcccactcaggaagatctcaataaa
ttcaagggaagtctcaaaaatatgacatcatgtaagaaaaatgcagttta
gtaggaaccaatgaccattttagactcatccttacataaaaaatgtttct
ttacttgtcttatgtcaaaatacctaaggacaacaacagttaagaaacag
acagcatacattgtctgatatgaggcccccaacacacacacagaagagga
ctgacagggtctgggttcattcagagatgatgcatctaactctcaagaga
ctgggggctcaagggagtttagaggtcacgtgaggtagggtatgggtgca
tccatgtagagacagggtggtgtggggaggacatatgggatgatgagcaa
taggagggtggatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_97766377_97767565
seq2: B6Ng01-179C11.b_44_1230 (reverse)

seq1  CTTTGTAAGTAATCTGACTTTCCTCTCTCAC-TACTATTAAAAGACTTTT  49
      |||| ||||||||| |||||||||||||||| |||||| ||||||| | |
seq2  CTTTATAAGTAATCAGACTTTCCTCTCTCACTTACTATAAAAAGAC-TAT  49

seq1  TATCAGTGTTTGAAAATTCTGTACATGGGCAGAATATGTTTTTCCTTCTT  99
      ||||||||  |||||| || |||||||||||||  ||| || || | |||
seq2  TATCAGTG--TGAAAA-TCAGTACATGGGCAGATAATG-TTATCGTACTT  95

seq1  TCCTTTTCCCTTTCTATCCCAAATTTACATTCTTTAATTAGAAAAATTAA  149
      ||| |||||| |||||||||||||||||| || || || |||||||||||
seq2  TCC-TTTCCCATTCTATCCCAAATTTACAATC-TTGATAAGAAAAATTAA  143

seq1  AGTCCCAAGGCCACT-CACTGGGGCCAGT-ATGTTCATGGGG-AGAACCA  196
      |||||||| | |||| |||||||| |||| |||||||||||| |||||||
seq2  AGTCCCAA-GACACTCCACTGGGG-CAGTAATGTTCATGGGGAAGAACCA  191

seq1  TCTACAGGGTTCAGAGGGCACAAAGATTGTAGAGGCATAAGTAGCAGATG  246
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCTACAGGGTTCAGAGGGCAC-AAGATTGTAGAGGCATAAGTAGCAGATG  240

seq1  TTATCCTGAGAAGCATTACTAGACATG-ACTGGTCATTGTACACATAAAC  295
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTATCCTGAGAAGCATTACTAGACATGAACTGGTCATTGTACACATAAAC  290

seq1  CT-ATAAATATTAACTGAATTACAAGACCTGCAG-AAAATAGACAATC-A  342
      || ||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  CTAATAAATATTAACTGAATTACAAGACCTGCAGAAAAATAGACAATCAA  340

seq1  AAGTCTCCATGTCAGTGGAAGAAGAGTTCATGAATTTCCCCCCATAGCTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCCATGTCAGTGGAAGAAGAGTTCATGAATTTCCCCCCATAGCTG  390

seq1  AGCAGCTATTGGCAACTGAAAGCTGTATGGAACAGAGAGTCAGTTTTCTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTATTGGCAACTGAAAGCTGTATGGAACAGAGAGTCAGTTTTCTT  440

seq1  CAGGTGTGCACCTCTTTTGCACAACTATGCTAGATATGCTCTATTAAAAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTGCACCTCTTTTGCACAACTATGCTAGATATGCTCTATTAAAAT  490

seq1  TTTTTTTAACTTAGTATGGTCTATTTTTTGGGGGGGGGTTGGTTTGGTTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAACTTAGTATGGTCTATTTTTTGGGGGGGGGTTGGTTTGGTTT  540

seq1  GGTTTTTTGTTGTTGTTGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTGTTGTTGTTGTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTG  590

seq1  GTGGACCTAAATGTGTGTTGTTTCATTCGTTAGTATTGATCAATATATAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACCTAAATGTGTGTTGTTTCATTCGTTAGTATTGATCAATATATAT  640

seq1  GGTATTCCATGAATATGCATCAGTTTTATTTCAGTGTAGCTACTATAAAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCCATGAATATGCATCAGTTTTATTTCAGTGTAGCTACTATAAAA  690

seq1  ATTTACCTAGATGGAGTATGCACTGGGAAAAGAGAAGACAGCTCCAAGCC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCTAGATGGAGTATGCACTGGGAAAAGAGAAGACAGCTCCAAGCC  740

seq1  ACAAAGGAAGACTATTAATACATGTCCTGGTTGTAGTGTAAGGTCATTCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGAAGACTATTAATACATGTCCTGGTTGTAGTGTAAGGTCATTCT  790

seq1  ATTCATACTATGAAATTCTACTCCTTGAGGAAATAACCTTTAGTACACTA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATACTATGAAATTCTACTCCTTGAGGAAATAACCTTTAGTACACTA  840

seq1  CCATGTCCTTCAGAAGGAATTCCTTGACCTCAGGTTTCCAAATGACTGTG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCCTTCAGAAGGAATTCCTTGACCTCAGGTTTCCAAATGACTGTG  890

seq1  TACATTGAACCTCATCACAAGTGAGTTTCTGAGCCACCTACCAAGTCACT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGAACCTCATCACAAGTGAGTTTCTGAGCCACCTACCAAGTCACT  940

seq1  AAGTTGAGAAATCCCAGTAACAATTACAAAGTCAAAATGATTTCATCAGA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAGAAATCCCAGTAACAATTACAAAGTCAAAATGATTTCATCAGA  990

seq1  ATAAAATATGATCAGCAAGTGTCAGAGAACATGGGTTGTTTTAGAAGCAC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATATGATCAGCAAGTGTCAGAGAACATGGGTTGTTTTAGAAGCAC  1040

seq1  ATAATTTGTGACTATATGTGATCACTTTGTGTAGCTTTGAATTGGAATAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTGTGACTATATGTGATCACTTTGTGTAGCTTTGAATTGGAATAT  1090

seq1  AGGTTGTTGGAAGAAGAACTGAAGATTAAAATTCTAAGTACCTCCAGGAC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTTGGAAGAAGAACTGAAGATTAAAATTCTAAGTACCTCCAGGAC  1140

seq1  CTCAGGAAACCTATAAGACCTAGGAATCCCAGAAAGGCACAGAATTC  1189
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAAACCTATAAGACCTAGGAATCCCAGAAAGGCACAGAATTC  1187


seq1: chr10_97559826_97560541
seq2: B6Ng01-179C11.g_65_780

seq1  GAATTCTCTGAGCTAAGGGGCATCTTTGGGATGCAGGAAATTATCCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGAGCTAAGGGGCATCTTTGGGATGCAGGAAATTATCCTCAT  50

seq1  GCTTTCACAAGCACTTGTGGGCTGCACAAATTTTGGATTTTTTTTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCACAAGCACTTGTGGGCTGCACAAATTTTGGATTTTTTTTTTATT  100

seq1  TTATTTTTTTTATTTTTTTAGAAATTGAAAGAAACTGCTGAACTTTACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTTTATTTTTTTAGAAATTGAAAGAAACTGCTGAACTTTACTG  150

seq1  GAAACATTTAATAACCTCATGCAAATAATGGGCCTAATGCTTAGCATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTTAATAACCTCATGCAAATAATGGGCCTAATGCTTAGCATTAA  200

seq1  GAAACCCAACTCTCTAATTGTAGGCCTTATGGTTAATACGTATTTGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCAACTCTCTAATTGTAGGCCTTATGGTTAATACGTATTTGGAAA  250

seq1  AAACTTGTAGTTGAACCAATAATTATTATCGTGTATATATTTGACCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGTAGTTGAACCAATAATTATTATCGTGTATATATTTGACCATCC  300

seq1  ACAATTTTCTATAGGTGTGGATAAAGCCCACTCAGGAAGATCTCAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTTCTATAGGTGTGGATAAAGCCCACTCAGGAAGATCTCAATAAA  350

seq1  TTCAAGGGAAGTCTCAAAAATATGACATCATGTAAGAAAAATGCAGTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGGAAGTCTCAAAAATATGACATCATGTAAGAAAAATGCAGTTTA  400

seq1  GTAGGAACCAATGACCATTTTAGACTCATCCTTACATAAAAAATGTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAACCAATGACCATTTTAGACTCATCCTTACATAAAAAATGTTTCT  450

seq1  TTACTTGTCTTATGTCAAAATACCTAAGGACAACAACAGTTAAGAAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGTCTTATGTCAAAATACCTAAGGACAACAACAGTTAAGAAACAG  500

seq1  ACAGCATACATTGTCTGATATGAGGCCCCCAACACACACACAGAAGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATACATTGTCTGATATGAGGCCCCCAACACACACACAGAAGAGGA  550

seq1  CTGACAGGGTCTGGGTTCATTCAGAGATGATGCATCTAACTCTCAAGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGGGTCTGGGTTCATTCAGAGATGATGCATCTAACTCTCAAGAGA  600

seq1  CTGGGGGCTCAAGGGAGTTTAGAGGTCACGTGAGGTAGGGTATGGGTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGCTCAAGGGAGTTTAGAGGTCACGTGAGGTAGGGTATGGGTGCA  650

seq1  TCCATGTAGAGACAGGGTGGTGTGGGGAGGACATATGGGATGATGAGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTAGAGACAGGGTGGTGTGGGGAGGACATATGGGATGATGAGCAA  700

seq1  TAGGAGGGTGGATGTG  716
      ||||||||||||||||
seq2  TAGGAGGGTGGATGTG  716


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