BAC Information

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BAC

Clone NameB6Ng01-180H06
Chromosome10 (Build37)
Map Location 55,020,126 - 55,021,131
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041898, LOC382460
Downstream geneLOC100041927, D630037F22Rik, 1700060H10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180H06.bB6Ng01-180H06.g
ACCGA006880GA006881
length1,0131,166
definitionB6Ng01-180H06.b B6Ng01-180H06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctagtctgttcactcggtgcagtcagaaattgccggggcat
ctgtcgatgtgtggaaagccagctgaaagaagggaataatcatctgttat
atttgggagacctcagcaagtttaggagaaggaaaaatactgaaacagaa
actcagtgtcacaacattcactttccttcatcttaatggagctttgctga
gatgcaattagcacaccatggaattcataaccactagcagtctgtcacct
tcccttcttgtgctactctgactttgtgcaaagacacaaacttgttcatc
ttcatttctggtaaaatatcctcacgatatcatagctcatggagtagcat
gaagagaaagtggatagacacttgacactaacctctgtgtagatgaatgt
acctgtacactcacaaacacatgtatgcacgcatgtgcatgcacacacac
acatacacacacacacacacacacacacacacacacacacacacacacac
acacacggataaaacataaaactaggagccattgaaaaccgtattgcctg
tatcagataaatattgtacactaacttatcaactattttgttattgaaat
aataccattagcatacaatggcactggtgactgatgggttttttttctta
tatgacttaatctcatgggctttaagagcgctgttataatatttctatgt
gtctacattgtgttttaaattaaaaaggacattttcattaagtgcgcctt
caaattaaggaagacattttataaggaaatgtagaaggagattgatatgt
ttgaaacatcccttggctgcaaggccagggtgattcacccagttgaaatc
actttaaaacttttgactctagctgcatatatatcaaaagatggcctagt
cggccatcactggaaagagaggcccattggacttgcaacttttatattgc
cccagtacaggggaataccagggccaaaaggggggagttggggtggggca
gggggagtagggg
gaattctgttggtgatgcttaccattgttgtttctgttctctttcctata
ttttctatccccaggatttcttcagtttgtgttttctttgtttcttctat
ttctactttcaggtctttcacagttttatttatttcattcaactctttaa
ttgtatttttttttttttgggtttatccttaaggaatttatttgtttctt
ctttaaatgcctctacctctttgatgtattttcctgtatttatgtaagaa
atataatcatttcctctttacaggcctctatcatctttataatattgggt
ttaaggcaatcttctcgtgtttaagttgtgttaggatatcctggacttgc
tttcgttaggtagttgtgctctgaggtgttatattcccctgggttttgtt
cattgtgttctttcgagggcctttagtcatctggatgtctttggtccctg
gatgttcttgtagtattaggtatcgggaagggggttaaccttgagagtcc
tagtgtgacctctgatagttatctttggtatggttccagatctgcaggtc
tcgatggttcaggagccacagatctgatgaaggtggatagagaggtggca
agataatggaaatctgcctggattagagggctgctcacggcagctcagct
tgctccagagctgctcacggcagctcagcttgctccagaggactccccaa
gcatttggatggaggtagggagcttatctgtgtggttcaggagccacacc
tctgatgaaggtagtcggataggtggcagtttaagagtgaagtgagtgtt
tctgttgttaataaaggttaaattctaataaagacaaataacatgagatc
atcttcagatttaataaaaaaatcgtcttccttaaaatttcatgcttggg
tagaaatatcattttccttgaacttcatatctaccacaataatgctttca
atttcctaaaggggaataaaaatacttgttaattgtgttaaatgacactg
aatactcgtataaccaaacttaactgatgattaaaaaataggataattct
aattaaatatcaatcagtactacagtcaaattgctcatgtttatgatcct
ggattcatccagaccatttaattgcttattgcctttccatagcttcaaca
actctaaaactggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_55020126_55021131
seq2: B6Ng01-180H06.b_45_1057

seq1  GAATTCATTCTAGTCTGTTCACTCGGTGCAGTCAGAAGTTGCCGTGGCAT  50
      ||||||||||||||||||||||||||||||||||||| |||||| |||||
seq2  GAATTCATTCTAGTCTGTTCACTCGGTGCAGTCAGAAATTGCCGGGGCAT  50

seq1  CTGTCGATGTGTGGAAAGCCAGCTGAAAGAAGGGAATAATCATCTGTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCGATGTGTGGAAAGCCAGCTGAAAGAAGGGAATAATCATCTGTTAT  100

seq1  ATTTGGGAGACCTCAGCAAGTTTAGGAGAAGGAAAAATACTGAAACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGAGACCTCAGCAAGTTTAGGAGAAGGAAAAATACTGAAACAGAA  150

seq1  ACTCAGTGTCACAACATTCACTTTCCTTCATCTTAATGGAGCTTTGCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTGTCACAACATTCACTTTCCTTCATCTTAATGGAGCTTTGCTGA  200

seq1  GATGCAATTAGCACACCATGGAATTCATAACCACTAGCAGTCTGTCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAATTAGCACACCATGGAATTCATAACCACTAGCAGTCTGTCACCT  250

seq1  TCCCTTCTTGTGCTACTCTGACTTTGTGCAAAGACACAAACTTGTTCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTTGTGCTACTCTGACTTTGTGCAAAGACACAAACTTGTTCATC  300

seq1  TTCATTTCTGGTAAAATATCCTCACGATATCATAGCTCATGGAGTAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCTGGTAAAATATCCTCACGATATCATAGCTCATGGAGTAGCAT  350

seq1  GAAGAGAAAGTGGATAGACACTTGACACTAACCTCTGTGTAGATGAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAAGTGGATAGACACTTGACACTAACCTCTGTGTAGATGAATGT  400

seq1  ACCTGTACACTCACAAACACATGTATGCACGCATGTGCATGCACACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTACACTCACAAACACATGTATGCACGCATGTGCATGCACACACAC  450

seq1  ACATACACACACACACACACACACACACACACACACACACACACACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACACACACACACACACACACACACACACACACACACACACACAC  500

seq1  ACACACGGATAAAACATAAAACTAGGAGCCATTGAAAACCGTATTGCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGGATAAAACATAAAACTAGGAGCCATTGAAAACCGTATTGCCTG  550

seq1  TATCAGATAAATATTGTACACTAACTTATCAACTATTTTGTTATTGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGATAAATATTGTACACTAACTTATCAACTATTTTGTTATTGAAAT  600

seq1  AATACCATTAGCATACAATGGCACTGGTGACTGATGGGTTTTTTTTCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCATTAGCATACAATGGCACTGGTGACTGATGGGTTTTTTTTCTTA  650

seq1  TATGACTTAATCTCATGGGCTTTAAGAGCGCTGTTATAATATTTCTATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTTAATCTCATGGGCTTTAAGAGCGCTGTTATAATATTTCTATGT  700

seq1  GTCTACATTGTGTTTTAAATTAAAAAGGACATTTTCATTAAGTGCGCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACATTGTGTTTTAAATTAAAAAGGACATTTTCATTAAGTGCGCCTT  750

seq1  CAAATTAAGGAAGACATTTTATAAGGAAATGTAGAAGGAGATTGATATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTAAGGAAGACATTTTATAAGGAAATGTAGAAGGAGATTGATATGT  800

seq1  TTGAAACATCCCTTGGCTGCAAGGCCAGGGTGATTCACCCAGTTGAAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACATCCCTTGGCTGCAAGGCCAGGGTGATTCACCCAGTTGAAATC  850

seq1  AC-TTAAAAC-TTTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGT  898
      || ||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAAACTTTTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGT  900

seq1  CGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATA-TGC  947
      ||||||||||||||||||||||||||||||||||||||  |||||| |||
seq2  CGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAACTTTTATATTGC  950

seq1  CCCAGTACAGGGGAATACCAGGGCCAAAAAGGGGGAGT--GGGT-GGGCA  994
      ||||||||||||||||||||||||||||| ||||||||  |||| |||||
seq2  CCCAGTACAGGGGAATACCAGGGCCAAAAGGGGGGAGTTGGGGTGGGGCA  1000

seq1  -GGGGAGTAGGGG  1006
       ||||||||||||
seq2  GGGGGAGTAGGGG  1013