BAC Information

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BAC

Clone NameB6Ng01-180L04
Chromosome10 (Build37)
Map Location 18,096,803 - 18,097,630
singlet/doubletsinglet
Overlap genenone
Upstream geneCited2, Txlnb, LOC665321, Heca, 3110003A17Rik, Reps1, LOC100039660, Ccdc28a, LOC627646
Downstream geneNhsl1, Hebp2, EG627729, D10Bwg1379e, EG237300, Perp, Tnfaip3, Tpi-rs5, EG637620, Olig3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180L04.bB6Ng01-180L04.g
ACCGA007060GA007061
length1,181829
definitionB6Ng01-180L04.b B6Ng01-180L04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatcctaggaataccgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatgactaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcggtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
attcatagcagccttatttataatagccagaagttggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttacgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcagaaa
agaactcaaatgaaatgtactcactgataagtggatattagtccagaaac
ttagtatagcgagatataaggtacaagatgcaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggacactttgctccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgccatatccagggatccatcccataatta
gcctccaaacgatgacaccatggcatacactagcaagcctttgttgcaag
gaccgtgatatagctgtcccttgtgagactaggccggggcctagcaacac
agaagtggatgctcacagtcaactattggatggatcacagggtccccaat
ggaggagctatagaaagtatccaaggagctaaagagatctgcaacctatc
ggtggaacaacattatggactaaccagtacccagaagctcttgacctcta
gcttgcattatggtatcaaaaagatggcctagttcggcccatcaaatgta
agagaatgccatggtctagccaactttatagtctcagtcagggataccgc
ctaggtctaaaaaatgggtattgggggtagg
gaattctgacaaagcaggttacactgccagtgagctatggatgtgcttgc
aaggctggggcaagcaggcacagagaagaaccttccttcttccatgtcct
tagataggcttccaacagaaggtgtagcccagactaaagatgtgtcttct
ataacctcaagatctggattaagccgggtggtggtggtgcacgcctttaa
tcccagcactcgggaggcagaggcaggtggatttctgaattcgaggccag
cctggtctacaagtgagttccaggacagccagggttatacagagaaaccc
tgtcttgggagaaaaaaaaaaaaaaaaaggctgtggacttaagtgcaaac
taggagagcatctagcctaagagttttaggatgttatagaattgttgtga
gaacatattttgattgcaaagcatgtaaaggacatgcaaagctgtttttc
tggggaagatacccagatgaagtgtgtggagatagagtttatttggtcct
tgacgccatgagactggatgttacaatggacctcagcatctcttggcttg
gatggtgagcctctaaagcattgagaaggccttccctactttttgataaa
acattctggaaaatagttcagcatttttacttaaaatttgacaatggact
catgtgacctagaagattgtctctttgtagctgagatgaaaataatgtgc
attcatagttgcattatgtgtaatttctcctaatcgagagaatctggaaa
gcactcaaatgtctttctgtgtttgaagaaattatggcttactcacatcc
agaataattaacactcactaataaaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_18096803_18097630
seq2: B6Ng01-180L04.g_67_895

seq1  GAATTCTGACAAAGGAGGCTCCACTGCCAGTGAGCTATGGATGTGCTTGC  50
      |||||||||||||| ||| | |||||||||||||||||||||||||||||
seq2  GAATTCTGACAAAGCAGGTTACACTGCCAGTGAGCTATGGATGTGCTTGC  50

seq1  AAGGCTGGGGCAAGCAGGCACAGAGAAGAACCTTCCTTCTTCCATGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGGGGCAAGCAGGCACAGAGAAGAACCTTCCTTCTTCCATGTCCT  100

seq1  TAGATAGGCTTCCAACAGAAGGTGTAGCCCAGACTAAAGATGTGTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGGCTTCCAACAGAAGGTGTAGCCCAGACTAAAGATGTGTCTTCT  150

seq1  ATAACCTCAAGATCTGGATTAAGCCGGGTGGTGGTGGTGCACGCCTTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTCAAGATCTGGATTAAGCCGGGTGGTGGTGGTGCACGCCTTTAA  200

seq1  TCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAATTCGAGGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAATTCGAGGCCAG  250

seq1  CCTGGTCTACAAGTGAGTTCCAGGACAGCCAGGGTTATACAGAGAAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCTACAAGTGAGTTCCAGGACAGCCAGGGTTATACAGAGAAACCC  300

seq1  TGTCTTGGGAGAAAAAAAAAAAAAAAAAGGCTGTGGACTTAAGTGCAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGGGAGAAAAAAAAAAAAAAAAAGGCTGTGGACTTAAGTGCAAAC  350

seq1  TAGGAGAGCATCTAGCCTAAGAGTTTTAGGATGTTATAGAATTGTTGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAGCATCTAGCCTAAGAGTTTTAGGATGTTATAGAATTGTTGTGA  400

seq1  GAACATATTTTGATTGCAAAGCATGTAAAGGACATGCAAAGCTGTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATATTTTGATTGCAAAGCATGTAAAGGACATGCAAAGCTGTTTTTC  450

seq1  TGGGGAAGATACCCAGATGAAGTGTGTGGAGATAGAGTTTATTTGGTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAAGATACCCAGATGAAGTGTGTGGAGATAGAGTTTATTTGGTCCT  500

seq1  TGACGCCATGAGACTGGATGTTACAATGGACCTCAGCATCTCTTGGCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGCCATGAGACTGGATGTTACAATGGACCTCAGCATCTCTTGGCTTG  550

seq1  GATGGTGAGCCTCTAAAGCATTGAGAAGGCCTTCCCTACTTTTTGATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGAGCCTCTAAAGCATTGAGAAGGCCTTCCCTACTTTTTGATAAA  600

seq1  ACATTCTGGAAAATAGTTCAGCATTTTTACTTAAAA-TTGACAATGGACT  649
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACATTCTGGAAAATAGTTCAGCATTTTTACTTAAAATTTGACAATGGACT  650

seq1  CATGTGACCTAGAAGATTGTCTCTTTGTAGCTGAGATGAAAATAATGTGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGACCTAGAAGATTGTCTCTTTGTAGCTGAGATGAAAATAATGTGC  700

seq1  ATTCATAGTTGCATTATGTGTAATTTCTCCTAATTGAGAGAATCTGGAAA  749
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATTCATAGTTGCATTATGTGTAATTTCTCCTAATCGAGAGAATCTGGAAA  750

seq1  GCACTCAAATGTCTTTCTGTGTTTGAAGAAATTATGGCTTATTCACATCC  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCACTCAAATGTCTTTCTGTGTTTGAAGAAATTATGGCTTACTCACATCC  800

seq1  AGAATAATTAACACTCACTAATAAAAAGG  828
      |||||||||||||||||||||||||||||
seq2  AGAATAATTAACACTCACTAATAAAAAGG  829