BAC Information

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BAC

Clone NameB6Ng01-181E03
Chromosome10 (Build37)
Map Location 101,302,151 - 101,482,861
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413, Cart1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181E03.bB6Ng01-181E03.g
ACCGA007468GA007469
length6481,024
definitionB6Ng01-181E03.b B6Ng01-181E03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,482,214 - 101,482,861)(101,302,151 - 101,303,168)
sequence
gaattcaaaaggatatgaaaataagccctgttttctaagatgactcttca
attctctcacttgtgttttgtgaaatgtaagctaatcctatgtacagcat
gtcatcagactataggatattttctgtttatgttaaatagcatgggtttt
atcacattgtactatcttaacctattatttttgaagttaacatctaatat
ttacttcttttaactgtctaaaacaatatttttatagattctgtttaata
tgaaataaaattatttatagtaaagtatgaagacatatcactatataaat
atgatttcagattaaaaattagaggaagtctcagaaaatgtatgtttagc
atgttttaagttctatcaatatttttttcagaaaaaaagacaactaaaat
tttgactacaaatataatgatatcctctcctatttaacatgtatgtcact
ctcactgataactctgctgttgaagatttctgctaaaactgaattacatg
gtaatctaaatgccagggttttttggatgactcatgataaaggcaaaata
gaaaaaaaaaacttgctgcatttctttctctctctctctgtctctctctc
tctctttctgtatgtattatgtatgtatgtgtgtatgtatgtatgtat

gaattcacttaaggaactattacccagtgcataaatgaaaaccatacatg
gctgacaacaaaggtggagtccatccacatgcttagagtactgcagtaca
tacaatttcatcctttgctttgcactcagacactaatgaaataaaccttg
actagcccttttgaatagctattgatcattcttatcaaatggattcttct
gagttttcaaattacagtgcaaggagatgggcaatggcaaacaatggacc
aagggagaaaaagaaaagaaaagaaaagaaaagaaaagaaaagaaaagaa
aagaaaagaaaagaaaagaaaagaaaagaaaaggaacaagcgggaaaagg
aaagtgaggaggagttttgtgggttttgtctaatgctgcttgcattgtgg
ttatttgggtccacaaaattgtaagataatctgtatgtctgctggtaaga
aacggtgggaactctgccctcagctggttttgacttttgaataaagttgc
cagtggccgatgcctgtggaagaagacagaattggcacttttaagattca
ctgcaagaaaccaaggaaagagaggaaagaggagatctgccatgccaaga
ggagaaccaagatgccacacctgagaaggtgttggagcagagagcttagc
caccatgtacaagctggaacagccccaagagggctgcctgactgggaccg
gggcaacaaagataaaatataaatgttagtaagttattactttggaatat
cagagggaggtggattagtcacatggaggttaggaagtggctcaactatt
gagctgtttaaagcatataagaatataaaggctgtatatatgtgtgtgtt
tcatttggtaacccagaacactggggaaggtaaggaggaatgcacgacct
ctactggggatcaatttgaataattacaattggtactattgcagaggaga
aatggcttaaagaaaaaatagccatgatgtatgggaaaaaaaaaaattag
caaagttagtaaagcagttgtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101482214_101482861
seq2: B6Ng01-181E03.b_44_691 (reverse)

seq1  ATACATACATACATACACACATACATACATAATACATACAGAAAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACATACATACACACATACATACATAATACATACAGAAAGAGAGA  50

seq1  GAGAGAGACAGAGAGAGAGAGAAAGAAATGCAGCAAGTTTTTTTTTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGACAGAGAGAGAGAGAAAGAAATGCAGCAAGTTTTTTTTTTCTA  100

seq1  TTTTGCCTTTATCATGAGTCATCCAAAAAACCCTGGCATTTAGATTACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCTTTATCATGAGTCATCCAAAAAACCCTGGCATTTAGATTACCA  150

seq1  TGTAATTCAGTTTTAGCAGAAATCTTCAACAGCAGAGTTATCAGTGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTCAGTTTTAGCAGAAATCTTCAACAGCAGAGTTATCAGTGAGAG  200

seq1  TGACATACATGTTAAATAGGAGAGGATATCATTATATTTGTAGTCAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATACATGTTAAATAGGAGAGGATATCATTATATTTGTAGTCAAAAT  250

seq1  TTTAGTTGTCTTTTTTTCTGAAAAAAATATTGATAGAACTTAAAACATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGTCTTTTTTTCTGAAAAAAATATTGATAGAACTTAAAACATGC  300

seq1  TAAACATACATTTTCTGAGACTTCCTCTAATTTTTAATCTGAAATCATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATACATTTTCTGAGACTTCCTCTAATTTTTAATCTGAAATCATAT  350

seq1  TTATATAGTGATATGTCTTCATACTTTACTATAAATAATTTTATTTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAGTGATATGTCTTCATACTTTACTATAAATAATTTTATTTCATA  400

seq1  TTAAACAGAATCTATAAAAATATTGTTTTAGACAGTTAAAAGAAGTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAGAATCTATAAAAATATTGTTTTAGACAGTTAAAAGAAGTAAAT  450

seq1  ATTAGATGTTAACTTCAAAAATAATAGGTTAAGATAGTACAATGTGATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATGTTAACTTCAAAAATAATAGGTTAAGATAGTACAATGTGATAA  500

seq1  AACCCATGCTATTTAACATAAACAGAAAATATCCTATAGTCTGATGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATGCTATTTAACATAAACAGAAAATATCCTATAGTCTGATGACAT  550

seq1  GCTGTACATAGGATTAGCTTACATTTCACAAAACACAAGTGAGAGAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTACATAGGATTAGCTTACATTTCACAAAACACAAGTGAGAGAATTG  600

seq1  AAGAGTCATCTTAGAAAACAGGGCTTATTTTCATATCCTTTTGAATTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCATCTTAGAAAACAGGGCTTATTTTCATATCCTTTTGAATTC  648


seq1: chr10_101302151_101303168
seq2: B6Ng01-181E03.g_63_1086

seq1  GAATTCACTTAAGGAACTATTACCCAGTGCATAAATGAAAACCATACATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTAAGGAACTATTACCCAGTGCATAAATGAAAACCATACATG  50

seq1  GCTGACAACAAAGGTGGAGTCCATCCACATGCTTAGAGTACTGCAGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACAACAAAGGTGGAGTCCATCCACATGCTTAGAGTACTGCAGTACA  100

seq1  TACAATTTCATCCTTTGCTTTGCACTCAGACACTAATGAAATAAACCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTTCATCCTTTGCTTTGCACTCAGACACTAATGAAATAAACCTTG  150

seq1  ACTAGCCCTTTTGAATAGCTATTGATCATTCTTATCAAATGGATTCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCCCTTTTGAATAGCTATTGATCATTCTTATCAAATGGATTCTTCT  200

seq1  GAGTTTTCAAATTACAGTGCAAGGAGATGGGCAATGGCAAACAATGGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTCAAATTACAGTGCAAGGAGATGGGCAATGGCAAACAATGGACC  250

seq1  AAGGGAGAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAA  300

seq1  AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGGAACAAGCGGGAAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGGAACAAGCGGGAAAAGG  350

seq1  AAAGTGAGGAGGAGTTTTGTGGGTTTTGTCTAATGCTGCTTGCATTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAGGAGGAGTTTTGTGGGTTTTGTCTAATGCTGCTTGCATTGTGG  400

seq1  TTATTTGGGTCCACAAAATTGTAAGATAATCTGTATGTCTGCTGGTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGGGTCCACAAAATTGTAAGATAATCTGTATGTCTGCTGGTAAGA  450

seq1  AACGGTGGGAACTCTGCCCTCAGCTGGTTTTGACTTTTGAATAAAGTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGTGGGAACTCTGCCCTCAGCTGGTTTTGACTTTTGAATAAAGTTGC  500

seq1  CAGTGGCCGATGCCTGTGGAAGAAGACAGAATTGGCACTTTTAAGATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCCGATGCCTGTGGAAGAAGACAGAATTGGCACTTTTAAGATTCA  550

seq1  CTGCAAGAAACCAAGGAAAGAGAGGAAAGAGGAGATCTGCCATGCCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGAAACCAAGGAAAGAGAGGAAAGAGGAGATCTGCCATGCCAAGA  600

seq1  GGAGAACCAAGATGCCACACCTGAGAAGGTGTTGGAGCAGAGAGCTTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAACCAAGATGCCACACCTGAGAAGGTGTTGGAGCAGAGAGCTTAGC  650

seq1  CACCATGTACAAGCTGGAACAGCCCCAAGAGGGCTGCCTGACTGGGACCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGTACAAGCTGGAACAGCCCCAAGAGGGCTGCCTGACTGGGACCG  700

seq1  GGGCAACAAAGATAAAATATAAATGTTAGTAAGTTATTACTTTGGAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAACAAAGATAAAATATAAATGTTAGTAAGTTATTACTTTGGAATAT  750

seq1  CAGAGGGAGGTGGATTAGTCACATGGAGGTTAGGAAGTGGCTCAACTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGAGGTGGATTAGTCACATGGAGGTTAGGAAGTGGCTCAACTATT  800

seq1  GAGCTGTTTAAAGCATATAAGAATATAAAGGCTGTATATATGTGTGTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTTTAAAGCATATAAGAATATAAAGGCTGTATATATGTGTGTGTT  850

seq1  TCATTTGGTAACCCAGAACACTGGGGAAGGTAAGGAGGAATGCACGACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGGTAACCCAGAACACTGGGGAAGGTAAGGAGGAATGCACGACCT  900

seq1  CTACT-GGGATCAATTTGAAT-ATTACAATTGGTACTATTGCAGAGGAGA  948
      ||||| ||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTACTGGGGATCAATTTGAATAATTACAATTGGTACTATTGCAGAGGAGA  950

seq1  AA-GGCTAAAGAAAAAAATAGCAATGATGTATGG--AAAAAAAAAAATAG  995
      || |||| ||  |||||||||| |||||||||||  |||||||||| |||
seq2  AATGGCTTAAAGAAAAAATAGCCATGATGTATGGGAAAAAAAAAAATTAG  1000

seq1  -AAAGTTAGTAAAGCAGTTGTCTC  1018
       |||||||||||||||||||||||
seq2  CAAAGTTAGTAAAGCAGTTGTCTC  1024


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