BAC Information

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BAC

Clone NameB6Ng01-181H17
Chromosome10 (Build37)
Map Location 21,145,552 - 21,338,351
singlet/doubletdoublet
Overlap geneLOC100039906, 1700020N01Rik
Upstream genePde7b, LOC667202, Ahi1, Myb, LOC100039870, Hbs1l, Aldh8a1
Downstream geneEG432436, LOC100039936, LOC628133, Sgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181H17.bB6Ng01-181H17.g
ACCGA007631GA007632
length97712
definitionB6Ng01-181H17.b B6Ng01-181H17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,338,255 - 21,338,351)(21,145,552 - 21,146,263)
sequence
gaattctatttatgttaaaatgggttttttttaagagtttttgtatagta
ttacataattttatatacctgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctctgtctctcccagtggctttgtctcttgcactgggctaatggc
aggaatggcaaatggttttcagttagtctataacaccctggtctccactg
tataaaacaggtcagagtgacgtgatggcccttgaaagtcttcctgggga
aagaaactgcaataaaataccctatggccccgccccttttgtatagttcc
tgtcttttgacaacaaatgaaagattaagaaggaacttgaagtaatagtg
agtatttatacttgaactaagttttggaatattctcatgattttgagttt
cctttcctgtttaagacaaagtccttccctgaaaaaacaaaacaaaacaa
aacaaaaacccaaaactattcctcaagaagaaataaagagagcaacagtt
cagctggatgctcacagtcatccattggatggagcacagggtccccaggg
aaggagccagaggaacacccagggagctgaagggatttgcagccccatag
caggaacatcaatatgaactgaccagtacccccgagctccttggaactaa
accaccaattaaagaaaacacacggtggaacttgtggctctagctgcata
tgtagcagaggatggcctagtcggtcatccatgggaggagaggcccttgg
ccctgtgaatgccccagtacaggggaatgccaggaccaggaatgggagtg
ggtgagttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21338255_21338351
seq2: B6Ng01-181H17.b_42_138 (reverse)

seq1  CACACACACACACACACACACACACACAGGTATATAAAATTATGTAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACAGGTATATAAAATTATGTAATAC  50

seq1  TATACAAAAACTCTTAAAAAAAACCCATTTTAACATAAATAGAATTC  97
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAAAACTCTTAAAAAAAACCCATTTTAACATAAATAGAATTC  97

seq1: chr10_21145552_21146263
seq2: B6Ng01-181H17.g_69_780

seq1  GAATTCTCTGTCTCTCCCAGTGGCTTTGTCTCTTGCACTGGGCTAATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTCTCTCCCAGTGGCTTTGTCTCTTGCACTGGGCTAATGGC  50

seq1  AGGAATGGCAAATGGTTTTCAGTTAGTCTATAACACCCTGGTCTCCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGGCAAATGGTTTTCAGTTAGTCTATAACACCCTGGTCTCCACTG  100

seq1  TATAAAACAGGTCAGAGTGACGTGATGGCCCTTGAAAGTCTTCCTGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAACAGGTCAGAGTGACGTGATGGCCCTTGAAAGTCTTCCTGGGGA  150

seq1  AAGAAACTGCAATAAAATACCCTATGGCCCCGCCCCTTTTGTATAGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTGCAATAAAATACCCTATGGCCCCGCCCCTTTTGTATAGTTCC  200

seq1  TGTCTTTTGACAACAAATGAAAGATTAAGAAGGAACTTGAAGTAATAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTGACAACAAATGAAAGATTAAGAAGGAACTTGAAGTAATAGTG  250

seq1  AGTATTTATACTTGAACTAAGTTTTGGAATATTCTCATGATTTTGAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTATACTTGAACTAAGTTTTGGAATATTCTCATGATTTTGAGTTT  300

seq1  CCTTTCCTGTTTAAGACAAAGTCCTTCCCTGAAAAAACAAAACAAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTGTTTAAGACAAAGTCCTTCCCTGAAAAAACAAAACAAAACAA  350

seq1  AACAAAAACCCAAAACTATTCCTCAAGAAGAAATAAAGAGAGCAACAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAACCCAAAACTATTCCTCAAGAAGAAATAAAGAGAGCAACAGTT  400

seq1  CAGCTGGATGCTCACAGTCATCCATTGGATGGAGCACAGGGTCCCCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGATGCTCACAGTCATCCATTGGATGGAGCACAGGGTCCCCAGGG  450

seq1  AAGGAGCCAGAGGAACACCCAGGGAGCTGAAGGGATTTGCAGCCCCATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCCAGAGGAACACCCAGGGAGCTGAAGGGATTTGCAGCCCCATAG  500

seq1  CAGGAACATCAATATGAACTGACCAGTACCCCCGAGCTCCTTGGAACTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACATCAATATGAACTGACCAGTACCCCCGAGCTCCTTGGAACTAA  550

seq1  ACCACCAATTAAAGAAAACACACGGTGGAACTTGTGGCTCTAGCTGCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAATTAAAGAAAACACACGGTGGAACTTGTGGCTCTAGCTGCATA  600

seq1  TGTAGCAGAGGATGGCCTAGTCGGTCATCCATGGGAGGAGAGGCCCTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAGAGGATGGCCTAGTCGGTCATCCATGGGAGGAGAGGCCCTTGG  650

seq1  CCCTGTGAATGCCCCAGTACAGGGGAATGCCAGGACCAGGAATGGGAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGAATGCCCCAGTACAGGGGAATGCCAGGACCAGGAATGGGAGTG  700

seq1  GGTGAGTTGGGG  712
      ||||||||||||
seq2  GGTGAGTTGGGG  712