BAC Information

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BAC

Clone NameB6Ng01-181J13
Chromosome10 (Build37)
Map Location 28,840,546 - 28,841,600
singlet/doubletsinglet
Overlap genenone
Upstream genePtprk, E430004N04Rik, 4930519F09Rik, 2310057J18Rik, LOC432447
Downstream gene6330407J23Rik, Echdc1, Rnf146, Rspo3, EG630389, Rpl12, LOC623064, LOC674389, Gm232, LOC667696
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181J13.bB6Ng01-181J13.g
ACCGA007715GA007716
length1,0471,170
definitionB6Ng01-181J13.b B6Ng01-181J13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcttcctcatcctacctcctaaatgaaagtgacttgtggatg
ttcttgagtatgtaagaagagaatggttaatagaaagtgggattatataa
tgaagcttctacaaggccattattcacgatggaggggggcactttgtgat
gatgtagatgtttggagtcccatgctttttaaaatgacctctcacctgtg
ctctgtaagcaagcccaataaattaattgctttcccaagttagacttttg
tggcattctactgtggtctgtaaccaattgtgataaacagatgcttgtgc
aaatttccccaggagaagtcaactcaacaaattggtactggtgcagcaca
agaatttagggttgtcaggcacatatattgcctctgacctgcttgagttg
agaaggacttttgagcatgaatgaaagatagcttggcttgtgacaatgtg
ggatatgggggcagaagggatcaatttgagtgccatagaaatgaagaaac
tatgtaatatagatactcatcacagcttttagacaaaggctgcataatct
gaagcaatataaggaacatgactgtctaaaccaggctgggatacccaaaa
atatgagggactgagggacaagtgtttgccttcactcctcggtggacctt
ggccaagccataggattgagtcagcctcatcattgagcctggaggtgtga
agaaagatgtacggctggtcccatagaagtgccctaggaaaaggaaacag
aacatgaaactacagagttagatcaggtaatgcctcccactcataccata
gtcccaaacaagcattgctccttttagaaaatcactcataccagcaacag
aacctttctatgggtgttttccatgtttcctttagtgtcccctttgatga
tggtttttgagctcaacctatgcttgcttgggatgggcagccttcacaga
tcccctgtactctctgtagagagtttgtacatggtgttaatatgataact
tcttaggaactaatagatccctaatccttgaggatagtgaagaaagt

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaatcctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcaggctggcggttcctca
gaaaattggacatagtattgcgggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaataacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagataacatacaatttcctaaacacatgaaactcaagaa
aaatgaagactgaagtgtggacactatgcccctccttagaagtgggaaca
aaacacccatggaaggagttacagagacaaagtttggagctgagatgaaa
ggatggatcatgtagagactgccttatccagagatccaccccattaatca
gcatccaaacgctgacaccattgcatacacttagcaagattttatcgaaa
ggaccccagatgtagctgtctccttgttgagaatatgccgggggccttag
caaacacataaagtggatgccccacagtcagctatatggaatggaatcac
agagctccaattggaggagctagaggaaagtactccaaggaagcctaaag
ggatcctgccaccctatagtgggaatcaacattaatggacctaaccagta
cccgggagcctcttgaactcctagcctgcaatatgtatcaaaagaaaggg
ctttgatcgggcataccctggaaagaagagtccttttgaaacccactaac
tttaattatggccccagaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_28840546_28841600
seq2: B6Ng01-181J13.b_45_1091 (reverse)

seq1  ACTTTCTTCACTATCCTTCCAAGGGAATTTAGGAATCTATAGGTCCCTAA  50
      |||||||||||||||||  |||||    ||||| ||||||  || |||||
seq2  ACTTTCTTCACTATCCT--CAAGG---ATTAGGGATCTATTAGTTCCTAA  45

seq1  GAAGTTATCATTATAACACCATGTAACAAAACTCTTCTACAGAGAGTACA  100
      |||||||||||  ||||||||||||   |||||| |||||||||||||||
seq2  GAAGTTATCATATTAACACCATGTA--CAAACTC-TCTACAGAGAGTACA  92

seq1  GGGGATCTGTGAAGGCTGCCCATCCCAAGCAAGCATAGGTTGAGCTCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATCTGTGAAGGCTGCCCATCCCAAGCAAGCATAGGTTGAGCTCAAA  142

seq1  AACCATCATCAAAGGGGACACTAAAGAAAACATGGAAAACACCCATAGAA  200
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AACCATCATCAAAGGGGACACTAAAGGAAACATGGAAAACACCCATAGAA  192

seq1  AGGTTCTGTTGCTGGTATGAGTGATTTTCTAAAAGGAGCAATGCTTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCTGTTGCTGGTATGAGTGATTTTCTAAAAGGAGCAATGCTTGTTT  242

seq1  GGGACTATGGTATGAGTGGGAGGCATTACCTGATCTAACTCTGTAGTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTATGGTATGAGTGGGAGGCATTACCTGATCTAACTCTGTAGTTTC  292

seq1  ATGTTCTGTTTCCTTTTCCTAGGGCACTTCTATGGGACCAGCCGTACATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGTTTCCTTTTCCTAGGGCACTTCTATGGGACCAGCCGTACATC  342

seq1  TTTCTTCACACCTCCAGGCTCAATGATGAGGCTGACTCAATCCTATGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCACACCTCCAGGCTCAATGATGAGGCTGACTCAATCCTATGGCT  392

seq1  TGGCCAAGGTCCACCGAGGAGTGAAGGCAAACACTTGTCCCTCAGTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAAGGTCCACCGAGGAGTGAAGGCAAACACTTGTCCCTCAGTCCCT  442

seq1  CATATTTTTGGGTATCCCAGCCTGGTTTAGACAGTCATGTTCCTTATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTTGGGTATCCCAGCCTGGTTTAGACAGTCATGTTCCTTATATT  492

seq1  GCTTCAGATTATGCAGCCTTTGTCTAAAAGCTGTGATGAGTATCTATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGATTATGCAGCCTTTGTCTAAAAGCTGTGATGAGTATCTATATT  542

seq1  ACATAGTTTCTTCATTTCTATGGCACTCAAATTGATCCCTTCTGCCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTTTCTTCATTTCTATGGCACTCAAATTGATCCCTTCTGCCCCCA  592

seq1  TATCCCACATTGTCACAAGCCAAGCTATCTTTCATTCATGCTCAAAAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCACATTGTCACAAGCCAAGCTATCTTTCATTCATGCTCAAAAGTC  642

seq1  CTTCTCAACTCAAGCAGGTCAGAGGCAATATATGTGCCTGACAACCCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAACTCAAGCAGGTCAGAGGCAATATATGTGCCTGACAACCCTAA  692

seq1  ATTCTTGTGCTGCACCAGTACCAATTTGTTGAGTTGACTTCTCCTGGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGTGCTGCACCAGTACCAATTTGTTGAGTTGACTTCTCCTGGGGA  742

seq1  AATTTGCACAAGCATCTGTTTATCACAATTGGTTACAGACCACAGTAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCACAAGCATCTGTTTATCACAATTGGTTACAGACCACAGTAGAA  792

seq1  TGCCACAAAAGTCTAACTTGGGAAAGCAATTAATTTATTGGGCTTGCTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAAAAGTCTAACTTGGGAAAGCAATTAATTTATTGGGCTTGCTTA  842

seq1  CAGAGCACAGGTGAGAGGTCATTTTAAAAAGCATGGGACTCCAAACATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCACAGGTGAGAGGTCATTTTAAAAAGCATGGGACTCCAAACATCT  892

seq1  ACATCATCACAAAGTGCCCCCCTCCATCGTGAATAATGGCCTTGTAGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATCACAAAGTGCCCCCCTCCATCGTGAATAATGGCCTTGTAGAAG  942

seq1  CTTCATTATATAATCCCACTTTCTATTAACCATTCTCTTCTTACATACTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTATATAATCCCACTTTCTATTAACCATTCTCTTCTTACATACTC  992

seq1  AAGAACATCCACAAGTCACTTTCATTTAGGAGGTAGGATGAGGAAGATGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACATCCACAAGTCACTTTCATTTAGGAGGTAGGATGAGGAAGATGG  1042

seq1  AATTC  1055
      |||||
seq2  AATTC  1047


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