BAC Information

Click to search

BAC

Clone NameB6Ng01-182C03
Chromosome10 (Build37)
Map Location 90,657,641 - 90,841,876
singlet/doubletdoublet
Overlap geneLOC100041769
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo
Downstream geneLOC100041799, LOC667203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182C03.bB6Ng01-182C03.g
ACCGA008110GA008111
length1,052759
definitionB6Ng01-182C03.b B6Ng01-182C03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,657,641 - 90,658,425)(90,841,119 - 90,841,876)
sequence
gaattctccattctaatgaggtgcctctagaggcctggagggcttagcca
gtaagcttcccttcccagacattcctccctacaaagggtaatctcaggcc
caccctgagaagtggggtatagttttatgcattcattttatgtcatgaca
ataaactgtttagaaccatggcctgccctgcctcttttctttttttcttt
tttttttttcggttttgagacagggtttctctgtgtagccctggctgtcc
tggaactcactctgtagaccaggctggcctggaactcagaaatctgcctg
cctctgcctcccaagtgctgggactaaaggcatgggccatcaccgcccgg
ctggcctgcctcttttcatcaagatttcctgtggggagcaatgaagaaag
tcttcgcctacagagctgcagcctagtttcaacagaaggcctctctgaga
tcccagccacaaccgccagcaagcctgctgccaccaagatgaggacaatt
atcctggagagacaagcaggagctttcccatgccatggcctaggcattat
ccccggcctgtacccccccacccccacccccattctctgctcacagccct
tgccacacctcagacttcccttttacactccccagagcagtgccccgggt
gcttccctacagcggggcatccgcccagggatggagtaagcacagtcaaa
ctccctgcgttctgcctgcccaagcagctgtgccagtggcagagaggact
ctggactacaactcgacagcggggctttttcccagttcctttcaagttct
gtaggatatgtgtgtgtacttttggtgtgtgtgtgtgtgcgcgcgtgcgc
atgagcgcgcgaggtttagatgctagaggtcaaagctagatgtcttcttc
aactgctttccactttttggtttgtttgtttgtttgttgtttattattga
gtcaggttcctaccttgaagctggtgctctctgcttggttaaattacttg
gcctggacctgcttgggatccatcggtcttacctggttttcaagctgtac
tt
gaattcttcagaccatgtcttcagtggatgaagtgggagctcacatccac
tgtttttcagctgtttgctgctagcctgtcactactgggagctctgctag
ctgattacagtaaacagctctggggaatataaacaactaagccacagaca
gagatgctaggcgatcccaagcatgatggaagcatccactgactcagaca
gaggtctagcgcttcttacggaagttgattcctgacccagacctgtaagc
agaagccatgaacagaaagacacaagggtgtcctgggcagagggcttagc
tttcttccaaggtctagacagctgagaaaaaccaagtgtagaagagctaa
aaatggttcagtgagattaatgcatggatatactgtaggagggataattt
cattggtctttgggtatcttactcgttcactccttactaacagcctggaa
atataaattctgatgcttcttttatttttcattccaaagagtttggaagc
atccagactcttagtatgaaaccatgaccaggcctaagagaaaccaaaat
agatgatgcttttaaattaggtaaaataattcagtacctatcaatagttc
tatgtgctcagcatgtggacacaaacagtatacatctgttttgctacttc
cattctctttaacatttccttccttaatcttagctagatccctatctcaa
gcagattatgtgatccatgagtgtagagagtgggagaaggaatgtattag
ggggtagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_90657641_90658425
seq2: B6Ng01-182C03.b_310_1092

seq1  CAGGCTGGCCTGGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGCCTGGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCT  50

seq1  GGGACTAAAGGCATGGGCCATCACCGCCCGGCTGGCCTGCCTCTTTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTAAAGGCATGGGCCATCACCGCCCGGCTGGCCTGCCTCTTTTCAT  100

seq1  CAAGATTTCCTGTGGGGAGCAATGAAGAAAGTCTTCGCCTACAGAGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTTCCTGTGGGGAGCAATGAAGAAAGTCTTCGCCTACAGAGCTGC  150

seq1  AGCCTAGTTTCAACAGAAGGCCTCTCTGAGATCCCAGCCACAACCGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGTTTCAACAGAAGGCCTCTCTGAGATCCCAGCCACAACCGCCAG  200

seq1  CAAGCCTGCTGCCACCAAGATGAGGACAATTATCCTGGAGAGACAAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTGCTGCCACCAAGATGAGGACAATTATCCTGGAGAGACAAGCAG  250

seq1  GAGCTTTCCCATGCCATGGCCTAGGCATTATCCCCGGCCTGTACCCCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTCCCATGCCATGGCCTAGGCATTATCCCCGGCCTGTACCCCCCC  300

seq1  ACCCCCACCCCCATTCTCTGCTCACAGCCCTTGCCACACCTCAGACTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACCCCCATTCTCTGCTCACAGCCCTTGCCACACCTCAGACTTCC  350

seq1  CTTTTACACTCCCCAGAGCAGTGCCCCGGGTGCTTCCCTACAGCGGGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTACACTCCCCAGAGCAGTGCCCCGGGTGCTTCCCTACAGCGGGGCA  400

seq1  TCCGCCCAGGGATGGAGTAAGCACAGTCAAACTCCCTGCGTTCTGCCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCCCAGGGATGGAGTAAGCACAGTCAAACTCCCTGCGTTCTGCCTGC  450

seq1  CCAAGCAGCTGTGCCAGTGGCAGAGAGGACTCTGGACTACAACTCGACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAGCTGTGCCAGTGGCAGAGAGGACTCTGGACTACAACTCGACAG  500

seq1  CGGGGCTTTTTCCCAGTTCCTTTCAAGTTCTGTAGGATATGTGTGTGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCTTTTTCCCAGTTCCTTTCAAGTTCTGTAGGATATGTGTGTGTAC  550

seq1  TTTTGGTGTGTGTGTGTGTGCGCGCGTGCGCATGAGCGCGCGAGGTTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGTGTGTGTGTGTGCGCGCGTGCGCATGAGCGCGCGAGGTTTAG  600

seq1  ATGCTAGAGGTCAAAGCTAGATGTCTTCTTCAACTGCTTTCCACTTTTT-  649
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATGCTAGAGGTCAAAGCTAGATGTCTTCTTCAACTGCTTTCCACTTTTTG  650

seq1  GTTTGTTTGTTTGTTTGTTTGTTTATTATTGAGTCAGGGTTCCTACC-TG  698
      ||||||||||||||||| |||||||||||||||||| |||||||||| ||
seq2  GTTTGTTTGTTTGTTTG-TTGTTTATTATTGAGTCA-GGTTCCTACCTTG  698

seq1  AAGCTGGTGCTCTCTGCTTTGTTTAGATTATCTGGCCATGGACCTGC-TG  747
      ||||||||||||||||| ||| ||| ||||  ||||| ||||||||| ||
seq2  AAGCTGGTGCTCTCTGC-TTGGTTAAATTACTTGGCC-TGGACCTGCTTG  746

seq1  GGATCCATCGGTCTTAGCCTGGTTTTCATGCTGTACTT  785
      |||||||||||||||| ||||||||||| |||||||||
seq2  GGATCCATCGGTCTTA-CCTGGTTTTCAAGCTGTACTT  783

seq1: chr10_90841119_90841876
seq2: B6Ng01-182C03.g_63_821 (reverse)

seq1  TACTA-CCCCTAATACATTCCTTCTCCCACTCTCTACACTCATGGATCAC  49
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACCCCCTAATACATTCCTTCTCCCACTCTCTACACTCATGGATCAC  50

seq1  ATAATCTGCTTGAGATAGGGATCTAGCTAAGATTAAGGAAGGAAATGTTA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTGCTTGAGATAGGGATCTAGCTAAGATTAAGGAAGGAAATGTTA  100

seq1  AAGAGAATGGAAGTAGCAAAACAGATGTATACTGTTTGTGTCCACATGCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAATGGAAGTAGCAAAACAGATGTATACTGTTTGTGTCCACATGCT  150

seq1  GAGCACATAGAACTATTGATAGGTACTGAATTATTTTACCTAATTTAAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACATAGAACTATTGATAGGTACTGAATTATTTTACCTAATTTAAAA  200

seq1  GCATCATCTATTTTGGTTTCTCTTAGGCCTGGTCATGGTTTCATACTAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATCTATTTTGGTTTCTCTTAGGCCTGGTCATGGTTTCATACTAAG  250

seq1  AGTCTGGATGCTTCCAAACTCTTTGGAATGAAAAATAAAAGAAGCATCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGATGCTTCCAAACTCTTTGGAATGAAAAATAAAAGAAGCATCAG  300

seq1  AATTTATATTTCCAGGCTGTTAGTAAGGAGTGAACGAGTAAGATACCCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATATTTCCAGGCTGTTAGTAAGGAGTGAACGAGTAAGATACCCAA  350

seq1  AGACCAATGAAATTATCCCTCCTACAGTATATCCATGCATTAATCTCACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAATGAAATTATCCCTCCTACAGTATATCCATGCATTAATCTCACT  400

seq1  GAACCATTTTTAGCTCTTCTACACTTGGTTTTTCTCAGCTGTCTAGACCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATTTTTAGCTCTTCTACACTTGGTTTTTCTCAGCTGTCTAGACCT  450

seq1  TGGAAGAAAGCTAAGCCCTCTGCCCAGGACACCCTTGTGTCTTTCTGTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAAAGCTAAGCCCTCTGCCCAGGACACCCTTGTGTCTTTCTGTTC  500

seq1  ATGGCTTCTGCTTACAGGTCTGGGTCAGGAATCAACTTCCGTAAGAAGCG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTCTGCTTACAGGTCTGGGTCAGGAATCAACTTCCGTAAGAAGCG  550

seq1  CTAGACCTCTGTCTGAGTCAGTGGATGCTTCCATCATGCTTGGGATCGCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACCTCTGTCTGAGTCAGTGGATGCTTCCATCATGCTTGGGATCGCC  600

seq1  TAGCATCTCTGTCTGTGGCTTAGTTGTTTATATTCCCCAGAGCTGTTTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATCTCTGTCTGTGGCTTAGTTGTTTATATTCCCCAGAGCTGTTTAC  650

seq1  TGTAATCAGCTAGCAGAGCTCCCAGTAGTGACAGGCTAGCAGCAAACAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCAGCTAGCAGAGCTCCCAGTAGTGACAGGCTAGCAGCAAACAGC  700

seq1  TGAAAAACAGTGGATGTGAGCTCCCACTTCATCCACTGAAGACATGGTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACAGTGGATGTGAGCTCCCACTTCATCCACTGAAGACATGGTCT  750

seq1  GAAGAATTC  758
      |||||||||
seq2  GAAGAATTC  759