BAC Information

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BAC

Clone NameB6Ng01-183I12
Chromosome10 (Build37)
Map Location 14,848,605 - 14,849,880
singlet/doubletsinglet
Overlap genenone
Upstream geneHivep2, Gpr126, LOC100039571, LOC100039409, Vta1, D230044M03Rik, EG666904, Nmbr, LOC666917
Downstream geneLOC637043, LOC100039492, LOC671439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183I12.bB6Ng01-183I12.g
ACCGA009130GA009131
length1,1121,197
definitionB6Ng01-183I12.b B6Ng01-183I12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattcatatgtgtatgattaaaactcttattactgattgcttataatc
tcaattcttgtgagagaaggaagactgataattttatgggaggtttcacc
acagaattctacagaaaaagctcactgtgatagacatttttcctacccgg
tgtcgaaaaatattgtgtatttttttcagaattgaagaaatatttttttg
agaatacagtcattgaaatgactaaacaagcatgtaaggtaatttaataa
tatttactaattaattttaatatgctaggaatgtatactctgtctgctta
ttaaaatttatacaaaatagacaacagagatttcaaacattgatcataca
gaattaagtgatagcaataaaacaatttatattaatgtttcttgtgatta
gtagatattgtcttcaaaatgtaggatgtaaacatgtctgataaaaccaa
taaagctacactttaaaaatatactttttatgggacagatgaatattttt
aataaggcatacttgttaatggcagaaatgcaagaacatctattttcaca
tatttttaaaaaggagttttactgaagaattgtaactctacaagcactta
tctacttactcatccactcatccactcatgaaaccacggattttatccat
ttgtttaacaagtgtttgttcaaagcctgtcaagtgtacaggatatggtg
ggcacatgaaagagtgacatgtctgagagatcacattagtcacatttcat
atactttcaaaagaccgaaaagtacctgcctgagaacttcgtaaggaaat
ggctaagtgtgttggctgatgtatcagaagggcttctgctcacctggctc
tccagtatacacaggtggatggggactttgcagatccataaaagactcca
tccagttcttcataatttctcatgttcagacataaaaatggcaaaagaaa
accagttttgtcagtggagtgttacagtgtaaatcagctacactccaagg
aagctccctatgctcagagtagctgtcaatacaaaacaacatgaaacata
ctttattttatgagtcttttatgggtattttttggttactgattggttgg
tgctgcatgcct

gaattcagtgaaaaggtaacattcaaatttacttctagcagacagtgaaa
ctaattaggcattacaaagaatggaactagaatagctcagggctagtcag
agtgattacttaggactcaggacagtaggggagtctcagagtctcaccta
aacaaggaaatacacaatagcctagtgaatagatgagtttaccatgaaag
agttagggaatccccctgagacaggtttcttcactaggcccaagggaacg
gcataatcaggcatttactaagaacccctggtggtgggcttaacaataga
ctagcattacacctggctcccttcttagttgtaaacagtggcctggtccc
caccatcttttgttgtatacattccttttgttttgcgtcactgtaactca
cctggtttcttgttattcttctgtataaaaagttttatgctcaatttgac
aaattacactcagattcaacatgctttctcgtgtcatctctgtttgtcac
ctactttcgctgactccttcgcccacctgcaaccagagacccgttccatg
cagatagaagacccacaaaagaggatagtctgcggcaattggtgcctgaa
tagggacaccagggcaggttagtctttatttctttttccttcttttttct
ttttcttctttttttcctcaggcaaggataggatctcgttactgcagatg
ggctgataagatagatcagttaaggttgagtacgttttatcatggggcaa
tcagaatcaaaagggaagattgtttctgtcagtctttaagcacatgttgt
ctggcagaggcctaaaggtctcggataaatccttacaagaatgttatgat
tttgtgcaaaaaatcagtccctggtttccagaggagggaaggttgacatt
gggaggattggaagcaagtaggtaaagatatgaggaagttccatgaggaa
aattcatctagggaaatcccaatatgcccttattctgtggcaacaaatgg
aggggtttattgactgagaaacagactttagaattttcttgcagaggagc
tccttcagagtccttctgatgatcagaaaggtgaactgtctgctctaaaa
agaaatcctgctatacaggcaaaaagagaaatgcctagaaatgtgcatcg
agacatctgatgatgatggctttctctgagaggaaccgagaaaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_14848605_14849880
seq2: B6Ng01-183I12.b_43_1153

seq1  GAATTCATATGTGTATGATTAAAACTCTTATTACTGATTGCTTATAATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGTGTATGATTAAAACTCTTATTACTGATTGCTTATAATCT  50

seq1  CAATTCTTGTGAGAGAAGGAAGACTGATAATTTTATGGGAGGTTTCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTTGTGAGAGAAGGAAGACTGATAATTTTATGGGAGGTTTCACCA  100

seq1  CAGAATTCTACAGAAAAAGCTCACTGTGATAGACATTTTTCCTACCCGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTCTACAGAAAAAGCTCACTGTGATAGACATTTTTCCTACCCGGT  150

seq1  GTCGAAAAATATTGTGTATTTTTTTCAGAATTGAAGAAATATTTTTTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAAAAATATTGTGTATTTTTTTCAGAATTGAAGAAATATTTTTTTGA  200

seq1  GAATACAGTCATTGAAATGACTAAACAAGCATGTAAGGTAATTTAATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAGTCATTGAAATGACTAAACAAGCATGTAAGGTAATTTAATAAT  250

seq1  ATTTACTAATTAATTTTAATATGCTAGGAATGTATACTCTGTCTGCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTAATTAATTTTAATATGCTAGGAATGTATACTCTGTCTGCTTAT  300

seq1  TAAAATTTATACAAAATAGACAACAGAGATTTCAAACATTGATCATACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTATACAAAATAGACAACAGAGATTTCAAACATTGATCATACAG  350

seq1  AATTAAGTGATAGCAATAAAACAATTTATATTAATGTTTCTTGTGATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTGATAGCAATAAAACAATTTATATTAATGTTTCTTGTGATTAG  400

seq1  TAGATATTGTCTTCAAAATGTAGGATGTAAACATGTCTGATAAAACCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTGTCTTCAAAATGTAGGATGTAAACATGTCTGATAAAACCAAT  450

seq1  AAAGCTACACTTTAAAAATATACTTTTTATGGGACAGATGAATATTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTACACTTTAAAAATATACTTTTTATGGGACAGATGAATATTTTTA  500

seq1  ATAAGGCATACTTGTTAATGGCAGAAATGCAAGAACATCTATTTTCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCATACTTGTTAATGGCAGAAATGCAAGAACATCTATTTTCACAT  550

seq1  ATTTTTAAAAAGGAGTTTTACTGAAGAATTGTAACTCTACAAGCACTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAAAAGGAGTTTTACTGAAGAATTGTAACTCTACAAGCACTTAT  600

seq1  CTACTTACTCATCCACTCATCCACTCATGAAACCACGGATTTTATCCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTACTCATCCACTCATCCACTCATGAAACCACGGATTTTATCCATT  650

seq1  TGTTTAACAAGTGTTTGTTCAAAGCCTGTCAAGTGTACAGGATATGGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAACAAGTGTTTGTTCAAAGCCTGTCAAGTGTACAGGATATGGTGG  700

seq1  GCACATGAAAGAGTGACATGTCTGAGAGATCACATTAGTCACATTTCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGAAAGAGTGACATGTCTGAGAGATCACATTAGTCACATTTCATA  750

seq1  TACTTTCAAAAGACCGAAAAGTACCTGCCTGAGAACTTCGTAAGGAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCAAAAGACCGAAAAGTACCTGCCTGAGAACTTCGTAAGGAAATG  800

seq1  GCTAAGTGTGTTGGCTGATGTATCAGAAGGGCTTCTGCTCACCTGGCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGTGTGTTGGCTGATGTATCAGAAGGGCTTCTGCTCACCTGGCTCT  850

seq1  CCAGTATACACAGGTGGATGGGGACTTTGCAGATCCATAAAAGACTCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATACACAGGTGGATGGGGACTTTGCAGATCCATAAAAGACTCCAT  900

seq1  CCAGTTCTTCATAATTTCTCATGTTCAGACATAAAAATGGCAAAAGAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCTTCATAATTTCTCATGTTCAGACATAAAAATGGCAAAAGAAAA  950

seq1  CCAGTTTTGTCAGTGGAGTGTTACAGTGTAAATCAGCTACACTCCAAGGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTTGTCAGTGGAGTGTTACAGTGTAAATCAGCTACACTCCAAGGA  1000

seq1  AGC-CCCTATGCTCAGGAGTAGCTGGTCAATACAAAACAACATGAAACAT  1049
      ||| ||||||||||| |||||||| |||||||||||||||||||||||||
seq2  AGCTCCCTATGCTCA-GAGTAGCT-GTCAATACAAAACAACATGAAACAT  1048

seq1  ACTTTATTTTTATGAGGTCCTTTTATTGGGTATTTTTGGTTTAACTGTTT  1099
      |||||| |||||||||   |||||| ||||||||||| | || ||||  |
seq2  ACTTTA-TTTTATGAG--TCTTTTA-TGGGTATTTTTTGGTT-ACTG-AT  1092

seq1  TTGTTTGT-TTGTTTGCCTTGTCTTTCCTTTTTTTCTTTAAGAGAGAGAA  1148
      | ||| ||  ||  |||||                               
seq2  TGGTTGGTGCTGCATGCCT-------------------------------  1111

seq1  AGGAGGAAACTGAAGTTGGTTGGAGAGTTAGGTTGGGAGATCTCGAAGGA  1198
                                                        
seq2  --------------------------------------------------  1111

seq1  GCTGTAGAAAGAGAAAGCATATGATTGACATATGTTATATGAAAAAAAAC  1248
                                                        
seq2  --------------------------------------------------  1111

seq1  TTGGTTAAAAAAGAAAATCTGCATGCCT  1276
                                  
seq2  ----------------------------  1111


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