BAC Information

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BAC

Clone NameB6Ng01-183O04
Chromosome10 (Build37)
Map Location 90,993,841 - 91,198,838
singlet/doubletdoublet
Overlap genenone
Upstream geneAnks1b, Apaf1, 1200009F10Rik, Slc25a3, Tmpo, LOC100041769
Downstream geneLOC100041799, LOC667203, LOC216229, LOC100041814, Nedd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183O04.bB6Ng01-183O04.g
ACCGA009399GA009400
length1,0071,105
definitionB6Ng01-183O04.b B6Ng01-183O04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,197,837 - 91,198,838)(90,993,841 - 90,994,947)
sequence
gaattctcatgtgttctagaatgtagccaagaactccctcaggcaaggcc
aggcatgtctcatatctatggaaggctttccttaggtcaaatactgttaa
ccactgtctgagtgtttatctcatttaatcctcaaaaacataagcaggaa
gtattgttaccatcccaactttgcagatgtgagactggaaattcaggacc
tactcaaggtcacgcagctagaagacagaagacctggaagtcaaatgcat
tctgtctgactgctaagcctgcggcactgcgagattttatttggtaggat
cttacgataagatggaatctggctttcagcacttaacattccgataggct
cccttgttccccgtccttcatttactatctggttgatttaagcttttcta
caacagcatccaatggaatgaatcgaatttgtttttcatgaacctcagtt
cacagcttttctctttaactgtcttttttttccccatccagatgtttata
agtgatggttggcattcctctctgaactggatgcttaaggtgtgagatct
tagggcagctataaaagatgattatctgctcgggtctgcattcattccat
cagcctgggctcactgtaccacctttattatatttttttccacaagcaaa
acaaaagaaagagcaagtgagaggctgggcttgtttgccagacacaggca
agtggagatggaggtttctgtgaggttgcagcctgggagggaggcaggca
gtggaggaaaagcaagggcatggacattaattgtctcagtgttcacggtg
acctttcttgctgttcaccgagtgtcagcaggtaggtttgagccagcagg
aggagcaggctgacctaatcaagcactgtgctgtctggaacattcccgag
gaaagtcaccaactgtggctggtttgggggtcagcggccagtggtggtct
tactgcctgtccgactttcttctctgctcatttcggccctccggcttctc
ttattga
gaattcaattgcctgcatcatatggctagatggtacctaagtgcattggg
cttatttttaagatgtctctcatagtttcagcttttgattttcatttatt
ttttttccagattattcacacattttcctgaaattcattagtagagagaa
aacaatgttaagtgatggtagaaaggcaagcagaggggataatcaatcaa
aaataagagcatgaatcagaggtgtggttagtgtgatgacagaagcaaca
tctatttctctcttaggtccatatatgagcaggagttcttggaataattc
gctggtgcactgaaaaagaaacatgaatttgacccagatctggactgaat
ggtgaatgtgtctgggggcacaattaacattgtgacccagagatttgccc
tccagaggcgtggcctgcatgtggtaatgctgacatggtgagacccatat
gtgatggtgtttcctggaaagtaggtcatgggctctgttctcacagttct
catggatggattggtcctcttcctgggattggagtaggaagaaattaatt
cccctgagaggaggttattaggaaaagtgtgaaccagaccctaggctctc
cattccttgcccaatcgcacgcattcttctacacgcagctatcgtctttt
taaatattgtgatataaccagggtactctggccagaaagacagtaccatg
ttaatttggaccttctagccagtgtaatcacgaagcaaaaaaaaaaaaaa
aaaaaagaaaaaggcctctttttcttcatatattacaatagtagcagcat
taggtttttgttatagccataaaaacatgactaaaagatcaatacacatg
ttttcccctttaattaattaatggacatatcttggggtaggaagttggga
gtcaaagtgtcagttgtggccccgttgacttgttttgattgcttcccccc
aatactcagttcagccattttccactgaacatcaagctttgatgctgtgg
tggcactgttgaaagatgtttccactagcattccctaagagccagaggat
gggaattttatttttgcattgaactctcctctgcagatcacacgtctttt
ttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_91197837_91198838
seq2: B6Ng01-183O04.b_46_1052 (reverse)

seq1  TCAATAAGAGAAGCC-GAGGGCCGAATAGAGCAGAGAAGAAAGTC-GACA  48
      ||||||||||||||| ||||||||||  ||||||||||||||||| ||||
seq2  TCAATAAGAGAAGCCGGAGGGCCGAAATGAGCAGAGAAGAAAGTCGGACA  50

seq1  -GCAGTAAGACACACACTGGCCGCTGACCCCC-AACCAGCCACAGTTGGT  96
       ||||||||||   |||||||||||||||||| |||||||||||||||||
seq2  GGCAGTAAGACCACCACTGGCCGCTGACCCCCAAACCAGCCACAGTTGGT  100

seq1  GACTTTCCTC-GGAATGTTCCAGACAGCACAGTGCTTGATTAGGTCAGCC  145
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GACTTTCCTCGGGAATGTTCCAGACAGCACAGTGCTTGATTAGGTCAGCC  150

seq1  TGCTCCTCCTGCTGGCTCAAACCTACCTGCCTGACACTCGGTG-ACAGCA  194
      ||||||||||||||||||||||||||||| ||||||||||||| ||||||
seq2  TGCTCCTCCTGCTGGCTCAAACCTACCTG-CTGACACTCGGTGAACAGCA  199

seq1  AGAAAGGTCACCGTGAACACTGAGACAATTAATGTCCATGCCCTTGCTTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGTCACCGTGAACACTGAGACAATTAATGTCCATGCCCTTGCTTT  249

seq1  TCCTCCACTGCCTGCCTCCCTCCCAGGCTGCAACCTCACAGAAACCTCCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACTGCCTGCCTCCCTCCCAGGCTGCAACCTCACAGAAACCTCCA  299

seq1  TCTCCACTTGCCTGTGTCTGGCAAACAAGCCCAGCCTCTCACTTGCTCTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACTTGCCTGTGTCTGGCAAACAAGCCCAGCCTCTCACTTGCTCTT  349

seq1  TCTTTTGTTTTGCTTGTGGAAAAAAATATAATAAAGGTGGTACAGTGAGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTTTTGCTTGTGGAAAAAAATATAATAAAGGTGGTACAGTGAGC  399

seq1  CCAGGCTGATGGAATGAATGCAGACCCGAGCAGATAATCATCTTTTATAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTGATGGAATGAATGCAGACCCGAGCAGATAATCATCTTTTATAG  449

seq1  CTGCCCTAAGATCTCACACCTTAAGCATCCAGTTCAGAGAGGAATGCCAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTAAGATCTCACACCTTAAGCATCCAGTTCAGAGAGGAATGCCAA  499

seq1  CCATCACTTATAAACATCTGGATGGGGAAAAAAAAGACAGTTAAAGAGAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACTTATAAACATCTGGATGGGGAAAAAAAAGACAGTTAAAGAGAA  549

seq1  AAGCTGTGAACTGAGGTTCATGAAAAACAAATTCGATTCATTCCATTGGA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGAACTGAGGTTCATGAAAAACAAATTCGATTCATTCCATTGGA  599

seq1  TGCTGTTGTAGAAAAGCTTAAATCAACCAGATAGTAAATGAAGGACGGGG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGTAGAAAAGCTTAAATCAACCAGATAGTAAATGAAGGACGGGG  649

seq1  AACAAGGGAGCCTATCGGAATGTTAAGTGCTGAAAGCCAGATTCCATCTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGGAGCCTATCGGAATGTTAAGTGCTGAAAGCCAGATTCCATCTT  699

seq1  ATCGTAAGATCCTACCAAATAAAATCTCGCAGTGCCGCAGGCTTAGCAGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTAAGATCCTACCAAATAAAATCTCGCAGTGCCGCAGGCTTAGCAGT  749

seq1  CAGACAGAATGCATTTGACTTCCAGGTCTTCTGTCTTCTAGCTGCGTGAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGAATGCATTTGACTTCCAGGTCTTCTGTCTTCTAGCTGCGTGAC  799

seq1  CTTGAGTAGGTCCTGAATTTCCAGTCTCACATCTGCAAAGTTGGGATGGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTAGGTCCTGAATTTCCAGTCTCACATCTGCAAAGTTGGGATGGT  849

seq1  AACAATACTTCCTGCTTATGTTTTTGAGGATTAAATGAGATAAACACTCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATACTTCCTGCTTATGTTTTTGAGGATTAAATGAGATAAACACTCA  899

seq1  GACAGTGGTTAACAGTATTTGACCTAAGGAAAGCCTTCCATAGATATGAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGGTTAACAGTATTTGACCTAAGGAAAGCCTTCCATAGATATGAG  949

seq1  ACATGCCTGGCCTTGCCTGAGGGAGTTCTTGGCTACATTCTAGAACACAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCTGGCCTTGCCTGAGGGAGTTCTTGGCTACATTCTAGAACACAT  999

seq1  GAGAATTC  1002
      ||||||||
seq2  GAGAATTC  1007

seq1: chr10_90993841_90994947
seq2: B6Ng01-183O04.g_66_1170

seq1  GAATTCAATTGCCTGCATCATATGGCTAGATGGTACCTAAGTGCATTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTGCCTGCATCATATGGCTAGATGGTACCTAAGTGCATTGGG  50

seq1  CTTATTTTTAAGATGTCTCTCATAGTTTCAGCTTTTGATTTTCATTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTTAAGATGTCTCTCATAGTTTCAGCTTTTGATTTTCATTTATT  100

seq1  TTTTTTCCAGATTATTCACACATTTTCCTGAAATTCATTAGTAGAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCAGATTATTCACACATTTTCCTGAAATTCATTAGTAGAGAGAA  150

seq1  AACAATGTTAAGTGATGGTAGAAAGGCAAGCAGAGGGGATAATCAATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTTAAGTGATGGTAGAAAGGCAAGCAGAGGGGATAATCAATCAA  200

seq1  AAATAAGAGCATGAATCAGAGGTGTGGTTAGTGTGATGACAGAAGCAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGAGCATGAATCAGAGGTGTGGTTAGTGTGATGACAGAAGCAACA  250

seq1  TCTATTTCTCTCTTAGGTCCATATATGAGCAGGAGTTCTTGGAATAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCTCTCTTAGGTCCATATATGAGCAGGAGTTCTTGGAATAATTC  300

seq1  GCTGGTGCACTGAAAAAGAAACATGAATTTGACCCAGATCTGGACTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGCACTGAAAAAGAAACATGAATTTGACCCAGATCTGGACTGAAT  350

seq1  GGTGAATGTGTCTGGGGGCACAATTAACATTGTGACCCAGAGATTTGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATGTGTCTGGGGGCACAATTAACATTGTGACCCAGAGATTTGCCC  400

seq1  TCCAGAGGCGTGGCCTGCATGTGGTAATGCTGACATGGTGAGACCCATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGCGTGGCCTGCATGTGGTAATGCTGACATGGTGAGACCCATAT  450

seq1  GTGATGGTGTTTCCTGGAAAGTAGGTCATGGGCTCTGTTCTCACAGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGTGTTTCCTGGAAAGTAGGTCATGGGCTCTGTTCTCACAGTTCT  500

seq1  CATGGATGGATTGGTCCTCTTCCTGGGATTGGAGTAGGAAGAAATTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATGGATTGGTCCTCTTCCTGGGATTGGAGTAGGAAGAAATTAATT  550

seq1  CCCCTGAGAGGAGGTTATTAGGAAAAGTGTGAACCAGACCCTAGGCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAGAGGAGGTTATTAGGAAAAGTGTGAACCAGACCCTAGGCTCTC  600

seq1  CATTCCTTGCCCAATCGCACGCATTCTTCTACACGCAGCTATCGTCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTGCCCAATCGCACGCATTCTTCTACACGCAGCTATCGTCTTTT  650

seq1  TAAATATTGTGATATAACCAGGGTACTCTGGCCAGAAAGACAGTACCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTGTGATATAACCAGGGTACTCTGGCCAGAAAGACAGTACCATG  700

seq1  TTAATTTGGACCTTCTAGCCAGTGTAATCACGAAGCAAAAAAAAAAAAAA  750
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  TTAATTTGGACCTTCTAGCCAGTGTAATCACGAAGC--AAAAAAAAAAAA  748

seq1  AAAAAAAAGAAAAAGGCCTCTTTTTCTTCATATATTACAATAGTAGCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGAAAAAGGCCTCTTTTTCTTCATATATTACAATAGTAGCAGC  798

seq1  ATTAGGTTTTTGTTATAGCCATAAAAACATGACTAAAAGATCAATACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTTTTTGTTATAGCCATAAAAACATGACTAAAAGATCAATACACA  848

seq1  TGTTTTCCCCTTTAATTAATTAATGGACATATCTT-GGGTAGGAAGTTGG  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGTTTTCCCCTTTAATTAATTAATGGACATATCTTGGGGTAGGAAGTTGG  898

seq1  GAGTCAAAGTGTCAGTTGTGGCCCCGTTGACTTTGTTTTGATTGCTTCCC  949
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAGTCAAAGTGTCAGTTGTGGCCCCGTTGAC-TTGTTTTGATTGCTTCCC  947

seq1  CCCAATACTCAGTTCAGCCATTTTCCACTGAACATCAAAGCTTTGATGCT  999
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCCAATACTCAGTTCAGCCATTTTCCACTGAACATC-AAGCTTTGATGCT  996

seq1  GTGGTGGCAACTGTGAAAGGATGTTTCCACTAGCA-TCCCTAAGAGGCAG  1048
      |||||||| |||||  || |||||||||||||||| |||||||||| |||
seq2  GTGGTGGC-ACTGTTGAAAGATGTTTCCACTAGCATTCCCTAAGAGCCAG  1045

seq1  AGGATGG--AATTTATTTTGCCAATGGACCTCT-CTCTGGCAGGGACCAC  1095
      |||||||  | ||||||||  | || || |||| |||| ||||    |||
seq2  AGGATGGGAATTTTATTTTTGC-ATTGAACTCTCCTCT-GCAGATCACAC  1093

seq1  GTCTTTTTTTTT  1107
      ||||||||||||
seq2  GTCTTTTTTTTT  1105