BAC Information

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BAC

Clone NameB6Ng01-186B09
Chromosome10 (Build37)
Map Location 9,104,611 - 9,230,472
singlet/doubletdoublet
Overlap genenone
Upstream geneUst, Sash1, LOC100039173, EG666625, LOC666636
Downstream geneE130306M17Rik, LOC666658, LOC620417, Stxbp5, LOC100039238, LOC665110, 9130014G24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186B09.bB6Ng01-186B09.g
ACCGA011024GA011025
length1,002656
definitionB6Ng01-186B09.b B6Ng01-186B09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,104,611 - 9,105,268)(9,229,820 - 9,230,472)
sequence
gaattccataacaaaagccataatttataaacaaaggaccagtaaggtaa
ggcacagggagagccctgactaacattatgagacaaagaaccttcaaaga
tgtcattgagtttgttttgtgttggccaactactggtgggcatgaagtct
acccttaagagtggtttgcttcctcagtgagactaagttttcatttgcac
atggttaccaactgaatgcagatgctgggttagggatgggggtatgtgtc
caattctcctttcagctctaggaccccagggtacaggcccatgcagacct
gtccacactgcctccatctctgtgaattaacatatatgtcagaactgttg
tgtctagaagaacttgaatccttggtgccctccatcctctgtggctccca
cactcattctacctctttttccttgagggtccctgaactctgagggagag
atttgatggagacatccttttcgggactgagtgttccaatgtgtttgtga
gagattttcttgatcagattatctgatggcagtctaagtaaagggacaca
gaagaaggacatgcttctgtttgcctcttgcctgtactctggctggcaag
ttcacccatcttgttgcttcaacattatttcatgatattagaacctactt
cttcaggcttccaatgtagactgaagattggtatctctccaggaaagttc
taggctcctaatgtcagattaggaccattgagacatccagtctcatagcc
tgaagaactacaggatgctcaacctctccaggatgcgacagccactattg
tgcaccacaggatgcatcctataagctggtttcatatatttctgccagtt
tctttagagaaacccaactattgcaacatatgggggaaatgccatgaaga
ccccaccaacagaatcatctgtaatagttgactgttggctatctgggggt
tatgaagggattgaaggcagacttggggcattctgaatgttgtggttcca
gg

gaattccttactgcaattgctccttgggagatacattcacccagctaccc
aagtgttggtccagagctgcccataatgaaacccatgagattttagatta
tttgcaattcagacccactaataagtgctcgattgttggcaaataattgg
ggtccgaggttagggtcacaaaaaaaattcagctcaaacagtcactgtta
taaagtatatgctaggataggattgaaattagtgctctttcttttagcac
tcgatctcctaaagctcagataatcgctgcgctgtggagggggtggggga
agacgacaaaaaaatctgccaccccttagaagagcttcatttcatttcca
atcaattggaggactttgtggaagatgacacttgctaaattgatctcaat
taaaatcagtgtgagtgtgtactctgtcttccacaatggctgcaccagag
ctgggaggcaaatcgtgctgttctgcgtggaagagcagccgcacctgtct
ggatggtattgacacttttcctttttttaattttcacctcagccttttct
tccacacgggctttgacctcccctggcatccctaacaaactcctctcaat
gcactgcatgcgcctctttccccttccgtgctgtagttgggaatggggga
ggaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_9104611_9105268
seq2: B6Ng01-186B09.b_389_1046

seq1  CTGTTGTGTCTAGAAGAACTTGAATCCTTGGTGCCCTCCATCCTCTGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTGTCTAGAAGAACTTGAATCCTTGGTGCCCTCCATCCTCTGTGG  50

seq1  CTCCCACACTCATTCTACCTCTTTTTCCTTGAGGGTCCCTGAACTCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACACTCATTCTACCTCTTTTTCCTTGAGGGTCCCTGAACTCTGAG  100

seq1  GGAGAGATTTGATGGAGACATCCTTTTCGGGACTGAGTGTTCCAATGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATTTGATGGAGACATCCTTTTCGGGACTGAGTGTTCCAATGTGT  150

seq1  TTGTGAGAGATTTTCTTGATCAGATTATCTGATGGCAGTCTAAGTAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGAGATTTTCTTGATCAGATTATCTGATGGCAGTCTAAGTAAAGG  200

seq1  GACACAGAAGAAGGACATGCTTCTGTTTGCCTCTTGCCTGTACTCTGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGAAGAAGGACATGCTTCTGTTTGCCTCTTGCCTGTACTCTGGCT  250

seq1  GGCAAGTTCACCCATCTTGTTGCTTCAACATTATTTCATGATATTAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTTCACCCATCTTGTTGCTTCAACATTATTTCATGATATTAGAAC  300

seq1  CTACTTCTTCAGGCTTCCAATGTAGACTGAAGATTGGTATCTCTCCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCTTCAGGCTTCCAATGTAGACTGAAGATTGGTATCTCTCCAGGA  350

seq1  AAGTTCTAGGCTCCTAATGTCAGATTAGGACCATTGAGACATCCAGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTAGGCTCCTAATGTCAGATTAGGACCATTGAGACATCCAGTCTC  400

seq1  ATAGCCTGAAGAACTACAGGATGCTCAACCTCTCCAGGATGCGACAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTGAAGAACTACAGGATGCTCAACCTCTCCAGGATGCGACAGCCA  450

seq1  CTATTGTGCACCACAGGATGCATCCTATAAGCTGGTTTCATATATTTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTGCACCACAGGATGCATCCTATAAGCTGGTTTCATATATTTCTG  500

seq1  CCAGTTTCTTTAGAGAAACCCAACTATTGCAACATATGGGGGAAATGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTCTTTAGAGAAACCCAACTATTGCAACATATGGGGGAAATGCCA  550

seq1  TGAAGACCCCACCAACAGAATCATCTGTAATAGGTGACTG-TGGCTATCT  599
      ||||||||||||||||||||||||||||||||| |||||| |||||||||
seq2  TGAAGACCCCACCAACAGAATCATCTGTAATAGTTGACTGTTGGCTATCT  600

seq1  GGGGGTTATGAAGGGATTGAAGGCAGACTTGGGGCATTCTGAGTGTTTGT  649
      |||||||||||||||||||||||||||||||||||||||||| || ||||
seq2  GGGGGTTATGAAGGGATTGAAGGCAGACTTGGGGCATTCTGAATG-TTGT  649

seq1  GGTTTCAGG  658
      |||| ||||
seq2  GGTTCCAGG  658


seq1: chr10_9229820_9230472
seq2: B6Ng01-186B09.g_65_720 (reverse)

seq1  AGTTCCTCCCCCATTCCC-ACTACAGCACGGAA-GGGAAAGAGGCGCATG  48
      |||||||||||||||||| |||||||||||||| ||||||||||||||||
seq2  AGTTCCTCCCCCATTCCCAACTACAGCACGGAAGGGGAAAGAGGCGCATG  50

seq1  CAGTGCATTGAGAGGAGTTTGTTAGGGATGCCA-GGGAGGTCAAAGCCCG  97
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAGTGCATTGAGAGGAGTTTGTTAGGGATGCCAGGGGAGGTCAAAGCCCG  100

seq1  TGTGGAAGAAAAGGCTGAGGTGAAAATTAAAAAAAGGAAAAGTGTCAATA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGAAAAGGCTGAGGTGAAAATTAAAAAAAGGAAAAGTGTCAATA  150

seq1  CCATCCAGACAGGTGCGGCTGCTCTTCCACGCAGAACAGCACGATTTGCC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGACAGGTGCGGCTGCTCTTCCACGCAGAACAGCACGATTTGCC  200

seq1  TCCCAGCTCTGGTGCAGCCATTGTGGAAGACAGAGTACACACTCACACTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCTCTGGTGCAGCCATTGTGGAAGACAGAGTACACACTCACACTG  250

seq1  ATTTTAATTGAGATCAATTTAGCAAGTGTCATCTTCCACAAAGTCCTCCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTGAGATCAATTTAGCAAGTGTCATCTTCCACAAAGTCCTCCA  300

seq1  ATTGATTGGAAATGAAATGAAGCTCTTCTAAGGGGTGGCAGATTTTTTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTGGAAATGAAATGAAGCTCTTCTAAGGGGTGGCAGATTTTTTTG  350

seq1  TCGTCTTCCCCCACCCCCTCCACAGCGCAGCGATTATCTGAGCTTTAGGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTTCCCCCACCCCCTCCACAGCGCAGCGATTATCTGAGCTTTAGGA  400

seq1  GATCGAGTGCTAAAAGAAAGAGCACTAATTTCAATCCTATCCTAGCATAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGAGTGCTAAAAGAAAGAGCACTAATTTCAATCCTATCCTAGCATAT  450

seq1  ACTTTATAACAGTGACTGTTTGAGCTGAATTTTTTTTGTGACCCTAACCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATAACAGTGACTGTTTGAGCTGAATTTTTTTTGTGACCCTAACCT  500

seq1  CGGACCCCAATTATTTGCCAACAATCGAGCACTTATTAGTGGGTCTGAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACCCCAATTATTTGCCAACAATCGAGCACTTATTAGTGGGTCTGAAT  550

seq1  TGCAAATAATCTAAAATCTCATGGGTTTCATTATGGGCAGCTCTGGACCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATAATCTAAAATCTCATGGGTTTCATTATGGGCAGCTCTGGACCA  600

seq1  ACACTTGGGTAGCTGGGTGAATGTATCTCCCAAGGAGCAATTGCAGTAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGGGTAGCTGGGTGAATGTATCTCCCAAGGAGCAATTGCAGTAAG  650

seq1  GAATTC  653
      ||||||
seq2  GAATTC  656


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