BAC Information

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BAC

Clone NameB6Ng01-186D18
Chromosome10 (Build37)
Map Location 37,329,901 - 37,331,043
singlet/doubletsinglet
Overlap genenone
Upstream geneHs3st5, Hdac2, Marcks, LOC100040846
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186D18.bB6Ng01-186D18.g
ACCGA011135GA011136
length1,141803
definitionB6Ng01-186D18.b B6Ng01-186D18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggagcaacttatttctacgtggagtcacatcagtactcactag
aaggaacagtttgagagcatcatcacctttttgtacatcttttagtacat
tcagttataaaatagagaaatacttatattatttctagaatgcaagaatt
tatatgtttaaaagcattggaattatggcctttaattaaggttgatagta
aataggcttatactatgtatttttttttcactgcaacaatttctacaatc
tttcttttgaggttatacaacatgaacatttataaggcaagttaaattct
tagcttcaatgtaaggaaactagaacttagaaaacccaacaagtttcata
aagttagacttcaggtctatttccttgattctaagacctgtgttcttttt
cacttacaatacttcaagtaaccatgtaaccatggtgtcttttcttttct
tttccttccttttcttttcttttcttttcttttcttttcttttcttttgt
tttcttttcttttgttttcttttcttttcctattctcattaatgctaaga
ataatatcatctctcttacataccctaaagattcttccatcttctggtgg
agctctgcatgagatctatttagatctgttggtaacaatccaactctgca
ggtgggtcctacctgaggccaaggttcacatttctagtaaagtgtggtta
ggatggcattaaagtcaaggttcaagtagaacaacaagaggattggcact
cagttgtcaatcttggcccaaggaacttggagaacatcaggcttgtcatt
atgtttataattatgtatgaatctgatgactccaggttagaacaagagga
aaccgggcttcccttggatttctaggggtagatcctagatggcttttata
ttgatttattaggctcatgagctcatttttagtgtggtagcactgtattt
aatttccttattgtccagacacatggtctggggtcttagagaaaatttga
atatgccagaggtccataataaaacatgacagctaggggtgaagttactt
gcaatggcaatgtgacataacacaggtacatcatcctgtgggaatcatta
tgtgctcttatataccctgcttaagacacaataggcactac

gaattcattacaaaaccatttcagcaggtaaaagtagactctgccattcc
atgctcattttaatatggtgggaagcagacttcagaagttgccaggtcat
tacaaaaaaagtggagccatgtcataaagatactgccacactacaaaatc
ctgttttacattccatacatgtaggatcacagaagatcacaggtgtgtag
ataagtatgatcacatggccagaatcacagtaaaattaatattggggtga
agactacctcagtttctagtcatctatggagggaaatgcttccagccctt
tcctttcctcccttccttctctctctctctctctctctctctctctctct
ctctctctctgtgtatgtgtgtgtgtgtgtgtttttttttttatacacat
atatacaaatatgggactctgtgtagaatatatgtaaaaaaacaaactcc
actcaaatttaaaaatcgcgatatctttgtcactgtggagggagagtgac
acgccagagacacctctctctagcggccggtgacttatgtatcgcgtaga
aatattacatatataaataagctgctaccatagagataacagcatattgc
aatattttgcactatatatgtgaaggaaatagatatatatgtgtctctct
ctctgacatacacaagtatatcgtgtgctcacatgcagagcgatgtgagt
atgattgtcactgtcacacgcacttctcactgagtagagagcggcgtgtc
tctctatgtatcactgaaagagatggttgtgagagataaagaggagagag
aga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_37329901_37331043
seq2: B6Ng01-186D18.b_45_1185

seq1  GAATTCAGGAGCAACTTATTTCTACGTGGAGTCACATCAGTACTCACTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGCAACTTATTTCTACGTGGAGTCACATCAGTACTCACTAG  50

seq1  AAGGAACAGTTTGAGAGCATCATCACCTTTTTGTACATCTTTTAGTACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACAGTTTGAGAGCATCATCACCTTTTTGTACATCTTTTAGTACAT  100

seq1  TCAGTTATAAAATAGAGAAATACTTATATTATTTCTAGAATGCAAGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTATAAAATAGAGAAATACTTATATTATTTCTAGAATGCAAGAATT  150

seq1  TATATGTTTAAAAGCATTGGAATTATGGCCTTTAATTAAGGTTGATAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTTAAAAGCATTGGAATTATGGCCTTTAATTAAGGTTGATAGTA  200

seq1  AATAGGCTTATACTATGTATTTTTTTTTCACTGCAACAATTTCTACAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGCTTATACTATGTATTTTTTTTTCACTGCAACAATTTCTACAATC  250

seq1  TTTCTTTTGAGGTTATACAACATGAACATTTATAAGGCAAGTTAAATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGAGGTTATACAACATGAACATTTATAAGGCAAGTTAAATTCT  300

seq1  TAGCTTCAATGTAAGGAAACTAGAACTTAGAAAACCCAACAAGTTTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCAATGTAAGGAAACTAGAACTTAGAAAACCCAACAAGTTTCATA  350

seq1  AAGTTAGACTTCAGGTCTATTTCCTTGATTCTAAGACCTGTGTTCTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGACTTCAGGTCTATTTCCTTGATTCTAAGACCTGTGTTCTTTTT  400

seq1  CACTTACAATACTTCAAGTAACCATGTAACCATGGTGTCTTTTCTTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACAATACTTCAAGTAACCATGTAACCATGGTGTCTTTTCTTTTCT  450

seq1  TTTCCTTCCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTGT  500

seq1  TTTCTTTTCTTTTGTTTTCTTTTCTTTTCCTATTCTCATTAATGCTAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTTTTGTTTTCTTTTCTTTTCCTATTCTCATTAATGCTAAGA  550

seq1  ATAATATCATCTCTCTTACATACCCTAAAGATTCTTCCATCTTCTGGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATCATCTCTCTTACATACCCTAAAGATTCTTCCATCTTCTGGTGG  600

seq1  AGCTCTGCATGAGATCTATTTAGATCTGTTGGTAACAATCCAACTCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGCATGAGATCTATTTAGATCTGTTGGTAACAATCCAACTCTGCA  650

seq1  GGTGGGTCCTACCTGAGGCCAAGGTTCACATTTCTAGTAAAGTGTGGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTCCTACCTGAGGCCAAGGTTCACATTTCTAGTAAAGTGTGGTTA  700

seq1  GGATGGCATTAAAGTCAAGGTTCAAGTAGAACAACAAGAGGATTGGCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCATTAAAGTCAAGGTTCAAGTAGAACAACAAGAGGATTGGCACT  750

seq1  CAGTTGTCAATCTTGGCCCAAGGAACTTGGAGAACATCAGGCTTGTCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTCAATCTTGGCCCAAGGAACTTGGAGAACATCAGGCTTGTCATT  800

seq1  ATGTTTATAATTATGTATGAATCTGATGACTCCAGGTTAGAACAAGAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATAATTATGTATGAATCTGATGACTCCAGGTTAGAACAAGAGGA  850

seq1  AACCGGGCTTCCCTTGGATTTCTAGGGGTAGATCCTAGATGGCTTTTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGGGCTTCCCTTGGATTTCTAGGGGTAGATCCTAGATGGCTTTTATA  900

seq1  TTGATTTATTAGGCTCATGAGCTCATTTTTAGTGTGGTAGCACTGTATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTATTAGGCTCATGAGCTCATTTTTAGTGTGGTAGCACTGTATTT  950

seq1  AATTTCCTTATTGTCCAGACACATGGTCTGGGGTCTTAGAGAAAAATTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AATTTCCTTATTGTCCAGACACATGGTCTGGGGTCTTAGAGAAAATTTGA  1000

seq1  ATATGCCAGAGGGTCCAT-ATAAAACATGACAGCTAGGGGTGAAGTTACT  1049
      |||||||||| ||||||| |||||||||||||||||||||||||||||||
seq2  ATATGCCAGA-GGTCCATAATAAAACATGACAGCTAGGGGTGAAGTTACT  1049

seq1  TGCAATGCCATTGTGACATAACACAGGGTAACATCATTCTGTGGG-ATCA  1098
      ||||||| || ||||||||||||||||   ||||||| ||||||| ||||
seq2  TGCAATGGCAATGTGACATAACACAGG--TACATCATCCTGTGGGAATCA  1097

seq1  TTATGTGCTCTTATATA-CCTGTTTAAGGAACACAATAGGCACTAC  1143
      ||||||||||||||||| |||| |||||  ||||||||||||||||
seq2  TTATGTGCTCTTATATACCCTGCTTAAG--ACACAATAGGCACTAC  1141


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