BAC Information

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BAC

Clone NameB6Ng01-187B23
Chromosome10 (Build37)
Map Location 40,809,749 - 40,918,749
singlet/doubletdoublet
Overlap geneA530089I17Rik
Upstream geneSlc16a10, Bxdc1, 2410016F19Rik, Amd1, Amd2, LOC668051, Cdc2l6, LOC666374, Slc22a16, Ddo, 9030224M15Rik, Cdc40, Wasf1, Gpr6
Downstream geneLOC633979, Zbtb24, Mical1, Smpd2, Ppil6, Cd164, 5033413D22Rik, EG629461, 2410017P07Rik, Sesn1, Armc2, 1700016J18Rik, LOC624784, Foxo3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187B23.bB6Ng01-187B23.g
ACCGA011783GA011784
length962962
definitionB6Ng01-187B23.b B6Ng01-187B23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,917,804 - 40,918,749)(40,809,749 - 40,810,701)
sequence
gaattcctgcctggagtgtttctctgctgctgtgagagccgcagttaagg
gtgaatgtcatcagtgctcaccaagcgatgtgtgttaagcagctcggaaa
cgaatgggtaaatatattattctaaataaggctgcaccattccttggggg
aaaatacagaacaccctgctagcgtctgcaatgtaattataatattttat
gtccaaaaatacaactggcatttgagtgcggggcaataggtcttctccct
ttgaggctgtgaggagcttaaagctaaattccctctgctcatgcccagga
gacaagtgttgattttttttttaatttttatttactttttgtcaccaaag
tacactaataagctaggtcactctactggaatccataaaagaaatttgtc
tcaccatttctacagtgtgtggtatttaaatgctagttttggtggttttg
ttttgttttaatctggcacccagtgctaccactatgataagagattgtct
gtctgtgctggtctttaacttcactcggtctctgtccaacagcctctgag
tggtatggattttgttttctttcccacctcagaaatgcatatgtcccttg
agaagtaaattaaataaataaataaataaataaataaataatctcattag
aaaatcagagctgaatctgttattgctgctcatgtctttataattaagca
ttaaactgtgccctccgatgtagggctagtggtattttgtcatttaaaag
aaacctcatgtttctatgctcccaacacgtggggacacagagggagttag
gatcagaaagttttgctagttctgtttgagtcagacacgatggtattgcc
ccccgcaactcctgcattcagacattctgaggctagcctggggcctacat
aattaagattgggccagccttgcttgccacaagatatgagtggtctaggg
gatacccagaag
gaattctcgatcttctttccaccttcaaggctagggatgttctcccatcc
ccgcctctgtcgtgaccctcgttccatagttagctctccccactaccaca
ggagaactgttttagttattcttcctattgtgtgccctgacaatatcagc
aagtgtggaaggctctagttggctcaggattcttggtactgtccattacg
gcagggaggtgaaggtggcaggagcatagagcaggtgctcaaagagcatc
tgtaatcaagaggcagagtgagaaatggtgttcagttccctttctctctc
tctttttcagtctagtagccctgcccagagaattggaccacccccaaggg
atgggtccttctgtctccacctaaccaagcacaccctcaggtcagtctct
caggccactctaggtctcacctagttgacaacatcacaggagggatgaga
gctttcagagattctgtgaccagatgggcccacctaaaccactcaggcta
ataatctcagtaaacttgaccataatcatacctccagagtccctccccca
tttacaccgttcacaggctgtagagattgatgtgtaggggtatctttggg
tgtccctgttctccctactacagctgccaagattaggattatcatttggc
cataggactgtttctgtgtatgaggaaggctttgtactccgatttcaatg
tttgtctccaattggtagagcaggtatcgcccctttattatccactggtg
ggttttgtgtgtgtgagtgtgcatctgtgttgtatgaattggtacgtggg
gtacatgtgggtgccccctcacatgtgtgcctgtgcgcgtgtggggcaag
ggtcagcaattgggtgctttattcatccagtctccatcttctatccttga
aacccagtctctcacaaatttcatctcctcttggctacagcacaccccca
ggaccctcctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_40917804_40918749
seq2: B6Ng01-187B23.b_45_1006 (reverse)

seq1  CCTCTGGGTGTCCCCTAGA-CACTCATATCTTGTGGC-AGC-AGGCTGG-  46
      | ||||||| ||||||||| ||||||||||||||||| ||| ||||||| 
seq2  CTTCTGGGTATCCCCTAGACCACTCATATCTTGTGGCAAGCAAGGCTGGC  50

seq1  CCAATCTT-ATTATGTAG--CCCAGGCTAGCCTCAG-ATGTCTGAATGCA  92
      |||||||| |||||||||  |||||||||||||||| |||||||||||||
seq2  CCAATCTTAATTATGTAGGCCCCAGGCTAGCCTCAGAATGTCTGAATGCA  100

seq1  GGAGTTGCGGGGG--CATACCATCGTGTCTGACTCAAACAG-ACTAGCAA  139
      |||||||||||||   ||||||||||||||||||||||||| ||||||||
seq2  GGAGTTGCGGGGGGCAATACCATCGTGTCTGACTCAAACAGAACTAGCAA  150

seq1  A--CTTCTGATCCT-ACTCCCTCTGTGT-CCCACGTGTTGGGAGCATAG-  184
      |   |||||||||| ||||||||||||| |||||||||||||||||||| 
seq2  AACTTTCTGATCCTAACTCCCTCTGTGTCCCCACGTGTTGGGAGCATAGA  200

seq1  AACATGAGGTTTCTTTTAAATGACAAAATACCACTAGCCCTACATCGGAG  234
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAGGTTTCTTTTAAATGACAAAATACCACTAGCCCTACATCGGAG  250

seq1  GGCACAGTTTAATGCTTAATTATAAAGACATGAGCAGCAATAACAGATTC  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGTTTAATGCTTAATTATAAAGACATGAGCAGCAATAACAGATTC  300

seq1  AGCTCTGATTTTCTAATGAGATTATTTATTTATTTATTTATTTATTTATT  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGATTTTCTAATGAGATTATTTATTTATTTATTTATTTATTTATT  350

seq1  TAATTTACTTCTCAAGGGACATATGCATTTCTGAGGTGGGAAAGAAAACA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTACTTCTCAAGGGACATATGCATTTCTGAGGTGGGAAAGAAAACA  400

seq1  AAATCCATACCACTCAGAGGCTGTTGGACAGAGACCGAGTGAAGTTAAAG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCATACCACTCAGAGGCTGTTGGACAGAGACCGAGTGAAGTTAAAG  450

seq1  ACCAGCACAGACAGACAATCTCTTATCATAGTGGTAGCACTGGGTGCCAG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCACAGACAGACAATCTCTTATCATAGTGGTAGCACTGGGTGCCAG  500

seq1  ATTAAAACAAAACAAAACCACCAAAACTAGCATTTAAATACCACACACTG  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAACAAAACAAAACCACCAAAACTAGCATTTAAATACCACACACTG  550

seq1  TAGAAATGGTGAGACAAATTTCTTTTATGGATTCCAGTAGAGTGACCTAG  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGGTGAGACAAATTTCTTTTATGGATTCCAGTAGAGTGACCTAG  600

seq1  CTTATTAGTGTACTTTGGTGACAAAAAGTAAATAAAAATTAAAAAAAAAA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAGTGTACTTTGGTGACAAAAAGTAAATAAAAATTAAAAAAAAAA  650

seq1  TCAACACTTGTCTCCTGGGCATGAGCAGAGGGAATTTAGCTTTAAGCTCC  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACTTGTCTCCTGGGCATGAGCAGAGGGAATTTAGCTTTAAGCTCC  700

seq1  TCACAGCCTCAAAGGGAGAAGACCTATTGCCCCGCACTCAAATGCCAGTT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCTCAAAGGGAGAAGACCTATTGCCCCGCACTCAAATGCCAGTT  750

seq1  GTATTTTTGGACATAAAATATTATAATTACATTGCAGACGCTAGCAGGGT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTGGACATAAAATATTATAATTACATTGCAGACGCTAGCAGGGT  800

seq1  GTTCTGTATTTTCCCCCAAGGAATGGTGCAGCCTTATTTAGAATAATATA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTATTTTCCCCCAAGGAATGGTGCAGCCTTATTTAGAATAATATA  850

seq1  TTTACCCATTCGTTTCCGAGCTGCTTAACACACATCGCTTGGTGAGCACT  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCATTCGTTTCCGAGCTGCTTAACACACATCGCTTGGTGAGCACT  900

seq1  GATGACATTCACCCTTAACTGCGGCTCTCACAGCAGCAGAGAAACACTCC  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACATTCACCCTTAACTGCGGCTCTCACAGCAGCAGAGAAACACTCC  950

seq1  AGGCAGGAATTC  946
      ||||||||||||
seq2  AGGCAGGAATTC  962

seq1: chr10_40809749_40810701
seq2: B6Ng01-187B23.g_63_1023

seq1  GAATTCTCGATCTTCTTTCCACCTTCAAGGCTAGGGATGTTCTCCCATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGATCTTCTTTCCACCTTCAAGGCTAGGGATGTTCTCCCATCC  50

seq1  CCGCCTCTGTCGTGACCCTCGTTCCATAGTTAGCTCTCCCCACTACCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTCTGTCGTGACCCTCGTTCCATAGTTAGCTCTCCCCACTACCACA  100

seq1  GGAGAACTGTTTTAGTTATTCTTCCTATTGTGTGCCCTGACAATATCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAACTGTTTTAGTTATTCTTCCTATTGTGTGCCCTGACAATATCAGC  150

seq1  AAGTGTGGAAGGCTCTAGTTGGCTCAGGATTCTTGGTACTGTCCATTACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGGAAGGCTCTAGTTGGCTCAGGATTCTTGGTACTGTCCATTACG  200

seq1  GCAGGGAGGTGAAGGTGGCAGGAGCATAGAGCAGGTGCTCAAAGAGCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAGGTGAAGGTGGCAGGAGCATAGAGCAGGTGCTCAAAGAGCATC  250

seq1  TGTAATCAAGAGGCAGAGTGAGAAATGGTGTTCAGTTCCCTTTCTCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCAAGAGGCAGAGTGAGAAATGGTGTTCAGTTCCCTTTCTCTCTC  300

seq1  TCTTTTTCAGTCTAGTAGCCCTGCCCAGAGAATTGGACCACCCCCAAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCAGTCTAGTAGCCCTGCCCAGAGAATTGGACCACCCCCAAGGG  350

seq1  ATGGGTCCTTCTGTCTCCACCTAACCAAGCACACCCTCAGGTCAGTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCCTTCTGTCTCCACCTAACCAAGCACACCCTCAGGTCAGTCTCT  400

seq1  CAGGCCACTCTAGGTCTCACCTAGTTGACAACATCACAGGAGGGATGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCACTCTAGGTCTCACCTAGTTGACAACATCACAGGAGGGATGAGA  450

seq1  GCTTTCAGAGATTCTGTGACCAGATGGGCCCACCTAAACCACTCAGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAGAGATTCTGTGACCAGATGGGCCCACCTAAACCACTCAGGCTA  500

seq1  ATAATCTCAGTAAACTTGACCATAATCATACCTCCAGAGTCCCTCCCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTCAGTAAACTTGACCATAATCATACCTCCAGAGTCCCTCCCCCA  550

seq1  TTTACACCGTTCACAGGCTGTAGAGATTGATGTGTAGGGGTATCTTTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACCGTTCACAGGCTGTAGAGATTGATGTGTAGGGGTATCTTTGGG  600

seq1  TGTCCCTGTTCTCCCTACTACAGCTGCCAAGATTAGGATTATCATTTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTGTTCTCCCTACTACAGCTGCCAAGATTAGGATTATCATTTGGC  650

seq1  CATAGGACTGTTTCTGTGTATGAGGAAGGCTTTGTACTCCGATTTCAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGACTGTTTCTGTGTATGAGGAAGGCTTTGTACTCCGATTTCAATG  700

seq1  TTTGTCTCCAATTGGTAGAGCAGGTATCGCCCCTTTATTATCCACTGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTCCAATTGGTAGAGCAGGTATCGCCCCTTTATTATCCACTGGTG  750

seq1  GGTTTTGTGTGTGTGAGTGTGCATCTGTGTTGTATGAATTGGTACGTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTGTGTGTGAGTGTGCATCTGTGTTGTATGAATTGGTACGTGGG  800

seq1  GTACATGTGGGTG-CCCCTCACATGTGTGCCTGTGCGCGTGTGGGGC-AG  848
      ||||||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  GTACATGTGGGTGCCCCCTCACATGTGTGCCTGTGCGCGTGTGGGGCAAG  850

seq1  GGTCAGCAA-TGGGTGCTTTATTCATCCAGTCTCCATCTTCTAT-CTTG-  895
      ||||||||| |||||||||||||||||||||||||||||||||| |||| 
seq2  GGTCAGCAATTGGGTGCTTTATTCATCCAGTCTCCATCTTCTATCCTTGA  900

seq1  AACCCAGTCTCTCAC-AAGTTCATCTCCTC-TGGCTACAGCACA-CCCCA  942
      ||||||||||||||| || ||||||||||| ||||||||||||| |||||
seq2  AACCCAGTCTCTCACAAATTTCATCTCCTCTTGGCTACAGCACACCCCCA  950

seq1  GGACCCTCCTG  953
      |||||||||||
seq2  GGACCCTCCTG  961