BAC Information

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BAC

Clone NameB6Ng01-187O21
Chromosome10 (Build37)
Map Location 21,524,507 - 21,681,182
singlet/doubletdoublet
Overlap geneLOC628133
Upstream geneLOC667202, Ahi1, Myb, LOC100039870, Hbs1l, Aldh8a1, LOC100039906, 1700020N01Rik, EG432436, LOC100039936
Downstream geneSgk, LOC667254, LOC665523, 4930444G20Rik, LOC100039992, E030030I06Rik, LOC665543, Ube2q2l, Raet1e, LOC100040023, LOC100038830, LOC667280, EG667281, LOC432438, Raet1d, LOC667299, LOC667303, LOC100040072, LOC100040078, Slc2a12, Tbpl1, Tcf21
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187O21.bB6Ng01-187O21.g
ACCGA012371GA012372
length790871
definitionB6Ng01-187O21.b B6Ng01-187O21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,524,507 - 21,525,294)(21,680,315 - 21,681,182)
sequence
gaattcatccctttgagaagacagaaccaagagaccctccttagtaattg
caacacaagcaatcacctgcttctatttctccatgagcagccagaaagga
ctattttagtgttttctgctgaagacctctaccatggtttggctcttcct
tagttatattgttttagttgggtgatgctcttacagtataaggttaaccg
ttatatagtataaagttcactagtccttggtacagtcagtgctgtcacca
gcaccagagtgtcatcacccataaagaagtagctccaccccttaggctaa
caccctgaactgctccaatcccagactctggtctctggaatcatcacagt
tccaggacagccagggctacagagaaaccctgtcttgaaaaaacaaacaa
acaaacaaaaaaattgattgcttaaagcggcttactacttacagaacttg
attggcaatgttcccaccccttaaccctgggaacagtagaggcgattgag
atcaactaacaaatacggaacttttcaggcctctggccaaccagtctgac
atcttcagacttggagctttttccagagctttctccagtcctagtgaata
cattcattctgatcgactggctgagataggagaagatgccccttgcgggt
gcaagagaggtgcatagggtagttgagcaacaggagggctggggtgatgt
tttaagctagaacaaagcaagttttgatgtagttgaaggaaggaggaaag
aaggaaggaaggaaggaaaggaaggaaggaaggaaggaat
gaattctcacacctgctctgttgcagcaggccacaccctggttcaatggt
cctctcaggagtaagcccttatcaccctcccagcctgtcaggaaactatc
tgaagaatggggcaaaggcatgtgctgctgagcaaggctaagagaaggga
aaggcacttctagaaaaccttgaagaacagtgtaccaaaaggaggaagat
tgtgttgttctgtgccttacatgtggttttcttttgttttgtttttgttt
tcctgctgatactgtctccatgatgatgaaattattattgcattattagt
gctgtctggtttacttgaggaaaccaagtaactcaggagaggttacttgg
tttcacgtttctttgttttctttcatccttcctttttgtttttgttttgt
tttttagatttatttatttattatatgtaagtacactgtagctgtcttca
gacacaccagaagagggtgtcagatctcattacggatggttgtgagccac
cgtgtggttgctgggatttgaactcaggacctttggaagagcagtcagtg
ctcttaccctctgagccatctagccagctccgtgttttgtttttaagatg
tgggtttctcctgcctttcttattctcctccttctttaagattcattatt
attgccaggcagtggtggtgcacacctttaatcccagcacttgggaggca
gatgcaggcggatttctgagttcgaggccagcctggtctacagagtgagt
tccaggacagccagggctacacagagaaaccctgtctcaaaaaaaaagca
aaacaaacaaacaaaaaaagattcattattatttgttgttattgttttgt
agttttattgggggttgaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_21524507_21525294
seq2: B6Ng01-187O21.b_48_836

seq1  GAATTCATCCCTTTGAGAAGACAGAACCAAGAGACCCTCCTTAGTAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCTTTGAGAAGACAGAACCAAGAGACCCTCCTTAGTAATTG  50

seq1  CAACACAAGCAATCACCTGCTTCTATTTCTCCATGAGCAGCCAGAAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAAGCAATCACCTGCTTCTATTTCTCCATGAGCAGCCAGAAAGGA  100

seq1  CTATTTTAGTGTTTTCTGCTGAAGACCTCTACCATGGTTTGGCTCTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTAGTGTTTTCTGCTGAAGACCTCTACCATGGTTTGGCTCTTCCT  150

seq1  TAGTTATATTGTTTTAGTTGGGTGATGCTCTTACAGTATAAGGTTAACCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATATTGTTTTAGTTGGGTGATGCTCTTACAGTATAAGGTTAACCG  200

seq1  TTATATAGTATAAAGTTCACTAGTCCTTGGTACAGTCAGTGCTGTCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAGTATAAAGTTCACTAGTCCTTGGTACAGTCAGTGCTGTCACCA  250

seq1  GCACCAGAGTGTCATCACCCATAAAGAAGTAGCTCCACCCCTTAGGCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAGAGTGTCATCACCCATAAAGAAGTAGCTCCACCCCTTAGGCTAA  300

seq1  CACCCTGAACTGCTCCAATCCCAGACTCTGGTCTCTGGAATCATCACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGAACTGCTCCAATCCCAGACTCTGGTCTCTGGAATCATCACAGT  350

seq1  TCCAGGACAGCCAGGGCTACAGAGAAACCCTGTCTTGAAAAAACAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACAGCCAGGGCTACAGAGAAACCCTGTCTTGAAAAAACAAACAA  400

seq1  ACAAACAAAAAAATTGATTGCTTAAAGCGGCTTACTACTTACAGAACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAAAAATTGATTGCTTAAAGCGGCTTACTACTTACAGAACTTG  450

seq1  ATTGGCAATGTTCCCACCCCTTAACCCTGGGAACAGTAGAGGCGATTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCAATGTTCCCACCCCTTAACCCTGGGAACAGTAGAGGCGATTGAG  500

seq1  ATCAACTAACAAATACGGAACTTTTCAGGCCTCTGGCCAACCAGTCTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTAACAAATACGGAACTTTTCAGGCCTCTGGCCAACCAGTCTGAC  550

seq1  ATCTTCAGACTTGGAGCTTTTTCCAGAGCTTTCTCCAGTCCTAGTGAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAGACTTGGAGCTTTTTCCAGAGCTTTCTCCAGTCCTAGTGAATA  600

seq1  CATTCATTCTGATCGACTGGCTGAGATAGGAGAAGATGCCCCTTGCGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTCTGATCGACTGGCTGAGATAGGAGAAGATGCCCCTTGCGGGT  650

seq1  GCAAGAGAGGTGCATAGGGTAGTTGAGCAACAGGAGGGCTGGGGTGATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGAGGTGCATAGGGTAGTTGAGCAACAGGAGGGCTGGGGTGATGT  700

seq1  TTTAAGCTAGAACAAAGCAAGTTTTGATGTAGTTGAAGGAAGGAGGAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCTAGAACAAAGCAAGTTTTGATGTAGTTGAAGGAAGGAGGAAAG  750

seq1  AAGGAAGGAAGGAAGG-AAGGAAGGAAGGAAGGAAGGAA  788
      |||||||||||||||| ||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAAGGAAGGAAGGAAGGAAGGAA  789

seq1: chr10_21680315_21681182
seq2: B6Ng01-187O21.g_66_936 (reverse)

seq1  TGTTCAACCCCCA--TAAACTACAAAACAATAACAAC-AATAATAATGAA  47
      |||||||||||||   ||||||||||||||||||||| ||||||||||||
seq2  TGTTCAACCCCCAATAAAACTACAAAACAATAACAACAAATAATAATGAA  50

seq1  TCTTTTTTTGTTTGTTTGTTTTGCTTTTTTTTTGAGACAGGGTTTCTCTG  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTGTTTGTTTGTTTTGCTTTTTTTTTGAGACAGGGTTTCTCTG  100

seq1  TGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGA  150

seq1  ACTCAGAAATCCGCCTGCATCTGCCTCCCAAGTGCTGGGATTAAAGGTGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAATCCGCCTGCATCTGCCTCCCAAGTGCTGGGATTAAAGGTGT  200

seq1  GCACCACCACTGCCTGGCAATAATAATGAATCTTAAAGAAGGAGGAGAAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCACCACTGCCTGGCAATAATAATGAATCTTAAAGAAGGAGGAGAAT  250

seq1  AAGAAAGGCAGGAGAAACCCACATCTTAAAAACAAAACACGGAGCTGGCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGGCAGGAGAAACCCACATCTTAAAAACAAAACACGGAGCTGGCT  300

seq1  AGATGGCTCAGAGGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTCAGAGGGTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGT  350

seq1  TCAAATCCCAGCAACCACACGGTGGCTCACAACCATCCGTAATGAGATCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCCCAGCAACCACACGGTGGCTCACAACCATCCGTAATGAGATCT  400

seq1  GACACCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTACATATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTACATATA  450

seq1  ATAAATAAATAAATCTAAAAAACAAAACAAAAACAAAAAGGAAGGATGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATCTAAAAAACAAAACAAAAACAAAAAGGAAGGATGAA  500

seq1  AGAAAACAAAGAAACGTGAAACCAAGTAACCTCTCCTGAGTTACTTGGTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAAAGAAACGTGAAACCAAGTAACCTCTCCTGAGTTACTTGGTT  550

seq1  TCCTCAAGTAAACCAGACAGCACTAATAATGCAATAATAATTTCATCATC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAGTAAACCAGACAGCACTAATAATGCAATAATAATTTCATCATC  600

seq1  ATGGAGACAGTATCAGCAGGAAAACAAAAACAAAACAAAAGAAAACCACA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACAGTATCAGCAGGAAAACAAAAACAAAACAAAAGAAAACCACA  650

seq1  TGTAAGGCACAGAACAACACAATCTTCCTCCTTTTGGTACACTGTTCTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGCACAGAACAACACAATCTTCCTCCTTTTGGTACACTGTTCTTC  700

seq1  AAGGTTTTCTAGAAGTGCCTTTCCCTTCTCTTAGCCTTGCTCAGCAGCAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTTCTAGAAGTGCCTTTCCCTTCTCTTAGCCTTGCTCAGCAGCAC  750

seq1  ATGCCTTTGCCCCATTCTTCAGATAGTTTCCTGACAGGCTGGGAGGGTGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTTGCCCCATTCTTCAGATAGTTTCCTGACAGGCTGGGAGGGTGA  800

seq1  TAAGGGCTTACTCCTGAGAGGACCATTGAACCAGGGTGTGGCCTGCTGCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGCTTACTCCTGAGAGGACCATTGAACCAGGGTGTGGCCTGCTGCA  850

seq1  ACAGAGCAGGTGTGAGAATTC  868
      |||||||||||||||||||||
seq2  ACAGAGCAGGTGTGAGAATTC  871