BAC Information

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BAC

Clone NameB6Ng01-188A23
Chromosome10 (Build37)
Map Location 122,941,807 - 123,063,141
singlet/doubletdoublet
Overlap geneAI851790
Upstream genePpm1h, D630033A02Rik, Mon2, Usp15, LOC100042958
Downstream gene4930503E24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188A23.bB6Ng01-188A23.g
ACCGA012467GA012468
length1,1891,191
definitionB6Ng01-188A23.b B6Ng01-188A23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,061,955 - 123,063,141)(122,941,807 - 122,942,967)
sequence
gaattctttcttactgatatgatactgataacagttgacttggtccttta
agagcatgtgctgatcttgttcgggaactgggttcaattcccacaggttg
gctcacaatgacctacaactccagttctaggggatcctatgctcttcttg
tctccctggatatggtccacaggtggggcccttatatacacacaggcaaa
gcactcacacttcaaataaataaataataaataaataaataaataaatgt
gaaaaataaatatcttttatgtgtttgtgatttcatcaccttaagtgatg
gaaacactttaggagtctgtctcttctgtcttagttttactggtgatttt
ttttactatccaaagcttttatgcttcccatccatcttttacctctaaac
ttatctaatttagaattaacatcactgatacatttgaagataattataat
caacagattggtataaatcttgctcattatttatcaaagtcactgtaatt
gcttttatttttcttttgctccaattacctctaagtttacaaaagtgaaa
aattatgtggtacactttgggggtgaaaattcttgtttccacattctcag
cttttaacatctctcctcacaaaaataaaaatgaaggttgatctttgatc
acatcataactctcagcctatgggtgccagccaggaaatgccatgaaggt
aaaagctactgagcagcagtcttaataggagaggtgcgcccttgatgccc
ttggagggcacattatgcattctgtaggaaatctactactgttcctttaa
ataaaattaattttttaaaaatctttttaagaacaaagtgtatcacttac
atgtctaaaacgctatgtgtggaatgtttcaagtccaggaattcctgcct
acttcagtaattactaatcagatagctactctttgcagactgtatgctaa
tggtgaagacacagagaacaggcagatatgattgctacgttcctgaaact
cacaattcgagtgggggagaaagagagagtcagtcgacaaacaaacatac
caattaaaaaggcaattataattttaatagtattatgaatagtgagaaag
gccgtaacaagaagcttgttaaattagggttctttttagcaattacttag
agagacaagcactgaacgggaggcaccattagccactgg

gttgtcacagaattgagttcggcatctttactgtatcgctatagttgtga
attaattctcccttgctaaattaataagtatgtaccaggaataattgctt
ttctttaaccgtggccacaatgagcagagttagatttctattagctatga
ggaaaaaaaaaaaagagtgactaatggaaaagccaacatgataattgtga
taccaaagacctccttaccctaaagggtgagctatcccccttgagaagct
gatgctgacatggaagatggatcctggtagtttgggtcttatatttgact
ctgatctctgtccgtgatttctatgggggacttgtgagacttctcacctt
tgtattttgtaggtgcattgtggagttgtagttggctggtgattataaag
tgttttgaacaaggttgttgtaagttacctgaggaaagtttcacaaagtc
tgggggcctgtcagataattagagggaaatgctctggaagagctgtttct
gtgactcccattagtgcgcagtgtggtgttgacacgcccattgagggaag
aatggctctcactctgctcagaaagagtccttaaaaatctctctctctgt
ttttttttttttttttttttttttgtcttttaaaatcatgttcgccatct
gctgggaaaggagttcagatgcctgcccgggaacttcacaattaaatgtg
ctaatacagtctcaggagaaaaacgattgccacacctgcttttctaaaag
tgaggaggaaaaaaaggtacagcaaacaaacaaacaaacaaacataccac
aaccctcaaaaaacaaagtgaaaaacccatctgcttttttctgtgcacag
caaatcttcagaatctttagaaaatgcaaaaacaagctcatgctttcagg
atgttaatagacatagtgaaagggtcactgcaaaaaccttttactcatta
taaaaagttactttcaaggccaagacctcattcaacccaatgtaaatggt
ttattcctcctcctctccctttatttttggggtttgaaatccgaatggga
gaaaacaatatcctggtaaatgaagaatggtcaatggtactgtattcacc
cggacgtatatcttaagaatttatatttgttctgaaccttaaagaattca
tgtagcaaatcatggtgcctgatatatatagaaccattcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123061955_123063141
seq2: B6Ng01-188A23.b_46_1234 (reverse)

seq1  CCAGTGGCTAATTGTTTCCCTCCC-TTCAGTGCTTGTCTCT-AATGTAAT  48
      |||||||||||| |  | |||||| ||||||||||||||||  | |||||
seq2  CCAGTGGCTAATGG--TGCCTCCCGTTCAGTGCTTGTCTCTCTAAGTAAT  48

seq1  TTCCTAAAAGAACCCTAATT--ACAAGC-TCTTG-TACGGC--TTCTCAC  92
      | |  |||||||||||||||  |||||| ||||| ||||||  |||||||
seq2  TGCTAAAAAGAACCCTAATTTAACAAGCTTCTTGTTACGGCCTTTCTCAC  98

seq1  TTATTCATAATACTTATTAAAATTATAATTGCCTTTTT-ATTGGTATGTT  141
       |||||||||||| |||||||||||||||||||||||| |||||||||||
seq2  -TATTCATAATAC-TATTAAAATTATAATTGCCTTTTTAATTGGTATGTT  146

seq1  TGTTTGTCGACTGACTCTCTCTTTCTCCCCCACTCGAA-TGTGAGTTTCA  190
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTTTGTCGACTGACTCTCTCTTTCTCCCCCACTCGAATTGTGAGTTTCA  196

seq1  GGAACGTAGCAATCATATCTGCCTTGTTCTCTGTTGTCTTCACCCATTAG  240
      ||||||||||||||||||||||| ||||||||| |||||||| |||||||
seq2  GGAACGTAGCAATCATATCTGCC-TGTTCTCTG-TGTCTTCA-CCATTAG  243

seq1  CATACAGTCTTGCAAAGAGTAGCTATCTGATTAGTAATTACTGAAGTAGG  290
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGTC-TGCAAAGAGTAGCTATCTGATTAGTAATTACTGAAGTAGG  292

seq1  CAGGAATTCCTGGACTTGAAACATTCCACACATAGCGTTTTAGACATGTA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATTCCTGGACTTGAAACATTCCACACATAGCGTTTTAGACATGTA  342

seq1  AGTGATACACTTTGTTCTTAAAAAGATTTTTAAAAAATTAATTTTATTTA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATACACTTTGTTCTTAAAAAGATTTTTAAAAAATTAATTTTATTTA  392

seq1  AAGGAACAGTAGTAGATTTCCTACAGAATGCATAATGTGCCCTCCAAGGG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACAGTAGTAGATTTCCTACAGAATGCATAATGTGCCCTCCAAGGG  442

seq1  CATCAAGGGCGCACCTCTCCTATTAAGACTGCTGCTCAGTAGCTTTTACC  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGGGCGCACCTCTCCTATTAAGACTGCTGCTCAGTAGCTTTTACC  492

seq1  TTCATGGCATTTCCTGGCTGGCACCCATAGGCTGAGAGTTATGATGTGAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGCATTTCCTGGCTGGCACCCATAGGCTGAGAGTTATGATGTGAT  542

seq1  CAAAGATCAACCTTCATTTTTATTTTTGTGAGGAGAGATGTTAAAAGCTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATCAACCTTCATTTTTATTTTTGTGAGGAGAGATGTTAAAAGCTG  592

seq1  AGAATGTGGAAACAAGAATTTTCACCCCCAAAGTGTACCACATAATTTTT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTGGAAACAAGAATTTTCACCCCCAAAGTGTACCACATAATTTTT  642

seq1  CACTTTTGTAAACTTAGAGGTAATTGGAGCAAAAGAAAAATAAAAGCAAT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTGTAAACTTAGAGGTAATTGGAGCAAAAGAAAAATAAAAGCAAT  692

seq1  TACAGTGACTTTGATAAATAATGAGCAAGATTTATACCAATCTGTTGATT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGACTTTGATAAATAATGAGCAAGATTTATACCAATCTGTTGATT  742

seq1  ATAATTATCTTCAAATGTATCAGTGATGTTAATTCTAAATTAGATAAGTT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATCTTCAAATGTATCAGTGATGTTAATTCTAAATTAGATAAGTT  792

seq1  TAGAGGTAAAAGATGGATGGGAAGCATAAAAGCTTTGGATAGTAAAAAAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTAAAAGATGGATGGGAAGCATAAAAGCTTTGGATAGTAAAAAAA  842

seq1  ATCACCAGTAAAACTAAGACAGAAGAGACAGACTCCTAAAGTGTTTCCAT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAGTAAAACTAAGACAGAAGAGACAGACTCCTAAAGTGTTTCCAT  892

seq1  CACTTAAGGTGATGAAATCACAAACACATAAAAGATATTTATTTTTCACA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAAGGTGATGAAATCACAAACACATAAAAGATATTTATTTTTCACA  942

seq1  TTTATTTATTTATTTATTTATTATTTATTTATTTGAAGTGTGAGTGCTTT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATTTATTTATTATTTATTTATTTGAAGTGTGAGTGCTTT  992

seq1  GCCTGTGTGTATATAAGGGCCCCACCTGTGGACCATATCCAGGGAGACAA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGTGTATATAAGGGCCCCACCTGTGGACCATATCCAGGGAGACAA  1042

seq1  GAAGAGCATAGGATCCCCTAGAACTGGAGTTGTAGGTCATTGTGAGCCAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCATAGGATCCCCTAGAACTGGAGTTGTAGGTCATTGTGAGCCAA  1092

seq1  CCTGTGGGAATTGAACCCAGTTCCCGAACAAGATCAGCACATGCTCTTAA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGGAATTGAACCCAGTTCCCGAACAAGATCAGCACATGCTCTTAA  1142

seq1  AGGACCAAGTCAACTGTTATCAGTATCATATCAGTAAGAAAGAATTC  1187
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAAGTCAACTGTTATCAGTATCATATCAGTAAGAAAGAATTC  1189


seq1: chr10_122941807_122942967
seq2: B6Ng01-188A23.g_77_1267

seq1  GTTGTCACAGAATTGAGTTCGGCATCTTTACTGTATCGCTATAGTTGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCACAGAATTGAGTTCGGCATCTTTACTGTATCGCTATAGTTGTGA  50

seq1  ATTAATTCTCCCTTGCTAAATTAATAAGTATGTACCAGGAATAATTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCTCCCTTGCTAAATTAATAAGTATGTACCAGGAATAATTGCTT  100

seq1  TTCTTTAACCGTGGCCACAATGAGCAGAGTTAGATTTCTATTAGCTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAACCGTGGCCACAATGAGCAGAGTTAGATTTCTATTAGCTATGA  150

seq1  GGAAAAAAAAAAAAGAGTGACTAATGGAAAAGCCAACATGATAATTGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAAAAAAGAGTGACTAATGGAAAAGCCAACATGATAATTGTGA  200

seq1  TACCAAAGACCTCCTTACCCTAAAGGGTGAGCTATCCCCCTTGAGAAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAAGACCTCCTTACCCTAAAGGGTGAGCTATCCCCCTTGAGAAGCT  250

seq1  GATGCTGACATGGAAGATGGATCCTGGTAGTTTGGGTCTTATATTTGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGACATGGAAGATGGATCCTGGTAGTTTGGGTCTTATATTTGACT  300

seq1  CTGATCTCTGTCCGTGATTTCTATGGGGGACTTGTGAGACTTCTCACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTCTGTCCGTGATTTCTATGGGGGACTTGTGAGACTTCTCACCTT  350

seq1  TGTATTTTGTAGGTGCATTGTGGAGTTGTAGTTGGCTGGTGATTATAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTGTAGGTGCATTGTGGAGTTGTAGTTGGCTGGTGATTATAAAG  400

seq1  TGTTTTGAACAAGGTTGTTGTAAGTTACCTGAGGAAAGTTTCACAAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGAACAAGGTTGTTGTAAGTTACCTGAGGAAAGTTTCACAAAGTC  450

seq1  TGGGGGCCTGTCAGATAATTAGAGGGAAATGCTCTGGAAGAGCTGTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCCTGTCAGATAATTAGAGGGAAATGCTCTGGAAGAGCTGTTTCT  500

seq1  GTGACTCCCATTAGTGCGCAGTGTGGTGTTGACACGCCCATTGAGGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCCCATTAGTGCGCAGTGTGGTGTTGACACGCCCATTGAGGGAAG  550

seq1  AATGGCTCTCACTCTGCTCAGAAAGAGTCCTTAAAAATCTCTCTCTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTCTCACTCTGCTCAGAAAGAGTCCTTAAAAATCTCTCTCTCTGT  600

seq1  TTTTTTTTTTTTTTTTTTTTTTTTGTCTTTTAAAATCATGTTCGCCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTGTCTTTTAAAATCATGTTCGCCATCT  650

seq1  GCTGGGAAAGGAGTTCAGATGCCTGCCCGGGAACTTCACAATTAAATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGAAAGGAGTTCAGATGCCTGCCCGGGAACTTCACAATTAAATGTG  700

seq1  CTAATACAGTCTCAGGAG-AAAACGATTGCCACACCTGCTTTTCTAAAAG  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTAATACAGTCTCAGGAGAAAAACGATTGCCACACCTGCTTTTCTAAAAG  750

seq1  TGAGGAGGAAAAAAAGGTACAGCAAACAAACAAACAAACAAACATACCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGGAAAAAAAGGTACAGCAAACAAACAAACAAACAAACATACCAC  800

seq1  AACCCTCAAAAAACAAAGTGAAAAACCCATCTGC-TTTTTCTGTGCACAG  848
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACCCTCAAAAAACAAAGTGAAAAACCCATCTGCTTTTTTCTGTGCACAG  850

seq1  CAAATC-TCAGAATCTTAGGAAAATGC-AAAACAAGCTCATGCTTTCA-G  895
      |||||| ||||||||||  |||||||| |||||||||||||||||||| |
seq2  CAAATCTTCAGAATCTTTAGAAAATGCAAAAACAAGCTCATGCTTTCAGG  900

seq1  ATGTTAATAGACATAGTGAAA-GGTCACTGCAAAAACCTTTTACTCATTA  944
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGTTAATAGACATAGTGAAAGGGTCACTGCAAAAACCTTTTACTCATTA  950

seq1  T-AAAAGTTACTTTCAAGGCAAAGA-CTCATTCAA-CCAATGTAAATGGT  991
      | |||||||||||||||||| |||| ||||||||| ||||||||||||||
seq2  TAAAAAGTTACTTTCAAGGCCAAGACCTCATTCAACCCAATGTAAATGGT  1000

seq1  TTATT--TCCT-CTCTCTCCTTATTTT--GGGTTTGAAATCGGATGGGGA  1036
      |||||  |||| ||||| | |||||||  |||||||||||| ||  ||||
seq2  TTATTCCTCCTCCTCTCCCTTTATTTTTGGGGTTTGAAATCCGAATGGGA  1050

seq1  GAA---CATATC--TGTAAATGA--GATGGTTCATTGTACTGTA-TCACC  1078
      |||    |||||   ||||||||   |||||  || |||||||| |||||
seq2  GAAAACAATATCCTGGTAAATGAAGAATGGTCAATGGTACTGTATTCACC  1100

seq1  --GACGTATA-CTTAAAGATTTATATTTG-TCTGAA-CTTAAGAAATGTC  1123
        |||||||| |||||  ||||||||||| |||||| |||||  ||  | 
seq2  CGGACGTATATCTTAAGAATTTATATTTGTTCTGAACCTTAAAGAA--TT  1148

seq1  CATGTAGCAAATCATTGTGCGTGATA---ATAGA--CATTCAC  1161
      ||||||||||||||| |||| |||||   |||||  |||||||
seq2  CATGTAGCAAATCATGGTGCCTGATATATATAGAACCATTCAC  1191


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