BAC Information

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BAC

Clone NameB6Ng01-188I14
Chromosome10 (Build37)
Map Location 49,448,949 - 49,450,123
singlet/doubletsinglet
Overlap geneGrik2
Upstream geneLOC546562, LOC100041689
Downstream geneLOC629652, Ascc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188I14.bB6Ng01-188I14.g
ACCGA012812GA012813
length1,1761,145
definitionB6Ng01-188I14.b B6Ng01-188I14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcatttacgtatctgcaatttgggtcaaaagtgtttcttaat
ctcctttaaaactatatctagtccttcaaaaataaatttaagttatgtct
taatttcatgctcaacttcagacttcttaatttcaattcagactaaggtg
tgagctgtgcactcatgtgttgagcatacctgctggtgaagacagagctt
ctgagggcagcgaccatcaaaggcacaacagtacatcacacatgaccaga
acgcaagacacccatcaagttacagacagcatttgttttggtcccctccc
cattataaaattcttggaatatttaaggagtatatgatcaatgtaatttc
ataccaccttttatgatttctaaatctgttttcttgaagtaatataccac
tgaacaatttattttaaggatttaccttactatcagtttgtagatttctc
ccaaatatctacattccattatgattaacatgagcataaacatagcatag
gtataattattatgtagctatgtagcaccatagaactaacagtgttgcat
taatcttccttggcccatggcattctagaaacaatgatatgggaacaact
tgagagaacagagaagcagctaggaaacaaggttttttaatggtttccta
ttagcaactcaaaacttctaagaagaatttcctttctactgttctggaca
tgtaatagatattatcttgaattgtgggggttttcttggaaagaagaatc
aacctgtataatgtactactaaaagtcattacaaatgaataggaaaatat
attctaccatacactacatattttatcttttatttttatttttgattcat
aaaaaaacaaaacttgcaaaacaacataagttaagtcaccttgtcataaa
caatctctgctttcttcagtagcctattctgccagactgtgtccaatgtg
cctggcttggaacagcaaacacagatccaccaaaataataaagtttgaat
ttttttttctgaattatggccaccttaaacttctttcaaacatcagataa
atcagcatcttatgggaactagtattagagactagtattattcatggtga
gcatttttgcctaacatatgtaatcttggaaatacctccgttacatgatt
atacatctactgtccacgttacctca

gaattctttgatccacttagacttgagcttagtgcagggagatgagaatg
gatcaattcatattcttctacatgctaaccaccagttgtgccagcaccat
ttgttgaagatgttgtcttctctccactggatggttttaactcctttttc
aaatatcaagtgaccataataggtatgtggtttatttctgggtcttcagt
tctgttccattaatctacctgtctgtcattgtaccagtaccatgcagttt
ttatcacaattgctctgttgtacagcttaaggtaggtcagggaatgtgat
tccactataggttcttatatttttgataatagtttttgctattctaggat
ttttgtaattccagatgaatttgccaattgccttttctaactctgtgaag
aatagagttggaattttgatggacattgcattgatctgtagattactttc
agcaagatagccattttgactatgagcaatagtgagttccctgccaatcc
atgagcatcagaaatccttctgtattctgagatcttcattgatttctttc
tacagagacttgaaattcttgtcatacagatctttcacttccttacttag
actcacaccaaggcatttttatagtctttgttgttcttgagttccatgtg
tttagcaaattatatcttatgtcttgggtatcctaagtttctgggctaat
attcacttatcagtgagtacatattgtgtgagttcctttgtgattgggtt
accttcactcagaatgatgccctccaggtccatccatttgcctaggaatt
tcataaattcatttcttttttaatagctgagtagtactccattgtgttag
atgtacaacattttctgtaatccattcctctattgagggggcatctgggt
tcttttccagcttctggctattattaaataaagctgctaatgaacatacc
tggagcatgtgtcctttttacccggttggacatcttctcgatataggccc
aggagaaggtgttgctggaatcatccggtagtactattgtccaatttctg
agaaccaacgactgatttcaaagatggttgtacaagctgcaatccattca
catgaaggaagtgtttcgctccttttctcatattcttacacagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_49448949_49450123
seq2: B6Ng01-188I14.b_48_1223

seq1  GAATTCCTTCATTTACGTATCTGCAATTTGGGTCAAAAGTGTTTCTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCATTTACGTATCTGCAATTTGGGTCAAAAGTGTTTCTTAAT  50

seq1  CTCCTTTAAAACTATATCTAGTCCTTCAAAAATAAATTTAAGTTATGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTAAAACTATATCTAGTCCTTCAAAAATAAATTTAAGTTATGTCT  100

seq1  TAATTTCATGCTCAACTTCAGACTTCTTAATTTCAATTCAGACTAAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCATGCTCAACTTCAGACTTCTTAATTTCAATTCAGACTAAGGTG  150

seq1  TGAGCTGTGCACTCATGTGTTGAGCATACCTGCTGGTGAAGACAGAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGTGCACTCATGTGTTGAGCATACCTGCTGGTGAAGACAGAGCTT  200

seq1  CTGAGGGCAGCGACCATCAAAGGCACAACAGTACATCACACATGACCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGCAGCGACCATCAAAGGCACAACAGTACATCACACATGACCAGA  250

seq1  ACGCAAGACACCCATCAAGTTACAGACAGCATTTGTTTTGGTCCCCTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAAGACACCCATCAAGTTACAGACAGCATTTGTTTTGGTCCCCTCCC  300

seq1  CATTATAAAATTCTTGGAATATTTAAGGAGTATATGATCAATGTAATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAAAATTCTTGGAATATTTAAGGAGTATATGATCAATGTAATTTC  350

seq1  ATACCACCTTTTATGATTTCTAAATCTGTTTTCTTGAAGTAATATACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCACCTTTTATGATTTCTAAATCTGTTTTCTTGAAGTAATATACCAC  400

seq1  TGAACAATTTATTTTAAGGATTTACCTTACTATCAGTTTGTAGATTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAATTTATTTTAAGGATTTACCTTACTATCAGTTTGTAGATTTCTC  450

seq1  CCAAATATCTACATTCCATTATGATTAACATGAGCATAAACATAGCATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATATCTACATTCCATTATGATTAACATGAGCATAAACATAGCATAG  500

seq1  GTATAATTATTATGTAGCTATGTAGCACCATAGAACTAACAGTGTTGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATTATTATGTAGCTATGTAGCACCATAGAACTAACAGTGTTGCAT  550

seq1  TAATCTTCCTTGGCCCATGGCATTCTAGAAACAATGATATGGGAACAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTCCTTGGCCCATGGCATTCTAGAAACAATGATATGGGAACAACT  600

seq1  TGAGAGAACAGAGAAGCAGCTAGGAAACAAGGTTTTTTAATGGTTTCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAACAGAGAAGCAGCTAGGAAACAAGGTTTTTTAATGGTTTCCTA  650

seq1  TTAGCAACTCAAAACTTCTAAGAAGAATTTCCTTTCTACTGTTCTGGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAACTCAAAACTTCTAAGAAGAATTTCCTTTCTACTGTTCTGGACA  700

seq1  TGTAATAGATATTATCTTGAATTGTGGGGGTTTTCTTGGAAAGAAGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAGATATTATCTTGAATTGTGGGGGTTTTCTTGGAAAGAAGAATC  750

seq1  AACCTGTATAATGTACTACTAAAAGTCATTACAAATGAATAGGAAAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTATAATGTACTACTAAAAGTCATTACAAATGAATAGGAAAATAT  800

seq1  ATTCTACCATACACTACATATTTTATCTTTTATTTTTATTTTTGATTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACCATACACTACATATTTTATCTTTTATTTTTATTTTTGATTCAT  850

seq1  AAAAAAACAAAACTTGCAAAACAACATAAGTTAAGTCACCTTGTCATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACAAAACTTGCAAAACAACATAAGTTAAGTCACCTTGTCATAAA  900

seq1  CAATCTCTGCTTTCTTCAGTAGCCTATTCTGCCAGACTGTGTCCAATGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCTGCTTTCTTCAGTAGCCTATTCTGCCAGACTGTGTCCAATGTG  950

seq1  CCTGGCTTGG-ACAGCAAACACAGATCCACCAAAATAATAAAGTTTGAA-  998
      |||||||||| |||||||||||||||||||||||||||||||||||||| 
seq2  CCTGGCTTGGAACAGCAAACACAGATCCACCAAAATAATAAAGTTTGAAT  1000

seq1  ATTTTTTTCTGAATTAT-GCCACCTTAAACTTCTTTCAAACATCAGATAA  1047
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTGAATTATGGCCACCTTAAACTTCTTTCAAACATCAGATAA  1050

seq1  AATTCAGCAATCTATGGAAACTAGTATTAGAGAACTAGTATTATTCAT-G  1096
      |  ||||||   ||||| |||||||||||||| ||||||||||||||| |
seq2  A--TCAGCATCTTATGGGAACTAGTATTAGAG-ACTAGTATTATTCATGG  1097

seq1  TGAGCATATTTGC--TACATATGTAAATCTTG--AATA-CTCCGTTACAT  1141
      ||||||| |||||   |||||||| |||||||  |||| |||||||||||
seq2  TGAGCATTTTTGCCTAACATATGT-AATCTTGGAAATACCTCCGTTACAT  1146

seq1  TGATATAATTAACATCTACTG-CCAACCTACCTCA  1175
         |||     |||||||||| |||   |||||||
seq2  GATTAT-----ACATCTACTGTCCACGTTACCTCA  1176


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