BAC Information

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BAC

Clone NameB6Ng01-189B21
Chromosome10 (Build37)
Map Location 28,266,340 - 28,267,366
singlet/doubletsinglet
Overlap genePtprk
Upstream geneLama2, LOC100040385, LOC100040961, LOC100040401
Downstream geneE430004N04Rik, 4930519F09Rik, 2310057J18Rik, LOC432447, 6330407J23Rik, Echdc1, Rnf146, Rspo3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189B21.bB6Ng01-189B21.g
ACCGA013228GA013229
length9801,040
definitionB6Ng01-189B21.b B6Ng01-189B21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagtctaccttcttgagttctttatatatattggatattagtcccc
tatccgatttgggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacagtgtcttttgccttgcagaatctttgcaattttat
gaggtcccatttatggattctcgatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtacccatatcttcgaggcttttccctact
ttctcctctataagtttcagtgtctctggttttatgtggcgttccttaat
ccacttagatttgaccttaatacaaggagataggaatggatcaattcgca
atcttctacatgataactgccagttgtgccagcaccatttgttgaaaaca
ctgtcttttttccactggatgcttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatctctgggtcttcaattctgttccattggt
ctacttgtctgtcactataccagtaccatgcagtttttatcacaattgct
ctgtagtacagctttagcttgggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atctgccgattgccctttctaattcattgaagaattgagttggaattttg
atggggattgcattgaatctatagattgcttttggcaagatagccatttt
tactatattgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaattctttcttcagagacttgaagttctttatcatta
cagatctttcacttccttagttagagtcacactcaagggtatttttatat
taatttgtaattattgagacgggtgttgtt

acttctagaagagtaaaattcaacaaatccttgcattttgaggaaggcat
ctgatgcccataccatttgttgtgtgtgtgagcagtgcctgtctttctgc
gtttactcagttaatatctttgctttgatgaaggagaggcaggatgcaga
ggagaggtaagcagccactttgggtataagagatgatactggtctgcatt
aatgtagcagaggggaagaagaggggtataaagcagggattcagaaaggt
ataggactttataactaattgcacaagaaatgggatgagtttctgtttat
cctaggtatttcctctttgcctgattagtcttttcatgattataaataac
ttaaccttcaaatattaatcaaaagataaagagagggagagagacagaga
aggggaaaggatgttgctccagtccccagcttcaagaagacattagcatg
tcttgtgctataaggaaagaaattgtaagtatcctgctgtgaaaaagtaa
tgtaatctctcatttaaaaatgatgtgttgaaggagatgcacacatgcaa
ggaaggtcaatgatcagattattgcatggtcaggagttcaaggaaatgtt
gatcaggaaagcactgatttgagaattgtcagtgtggatggtaacccaag
ttatagaaactgtaaaatcacaaagccaggaagtgtggaaatccatagat
catgaggctgatgcccttgagggacccaaaatgacagccagtccccatga
atgaccaagatgaggggcacttataaaagaatcctggaaagaataggcca
aagtcttggcagtgggaaggacactgccgctgacgtcccactgaaagggc
agtatggcccaggaacatggccagggaaagtcaagggcttctaacatttc
aaatacagagaaaggtgcctgttgaagtccagccacttgtaagaatggtg
cttctgtcagctggttcatgtcttttccattgcaatcacaagcccaagaa
cagggaaaaaatatatgatgtattcagaagatggtgtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_28266340_28267366
seq2: B6Ng01-189B21.g_74_1113

seq1  ACTTCTAGAAGAGTAAAATTCAACAAATCCTTGCATTTTGAGGAAGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTAGAAGAGTAAAATTCAACAAATCCTTGCATTTTGAGGAAGGCAT  50

seq1  CTGATGCCCATACCATTTGTTGTGTGTGTGAGCAGTGCCTGTCTTTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGCCCATACCATTTGTTGTGTGTGTGAGCAGTGCCTGTCTTTCTGC  100

seq1  GTTTACTCAGTTAATATCTTTGCTTTGATGAAGGAGAGGCAGGATGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTCAGTTAATATCTTTGCTTTGATGAAGGAGAGGCAGGATGCAGA  150

seq1  GGAGAGGTAAGCAGCCACTTTGGGTATAAGAGATGATACTGGTCTGCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGTAAGCAGCCACTTTGGGTATAAGAGATGATACTGGTCTGCATT  200

seq1  AATGTAGCAGAGGGGAAGAAGAGGGGTATAAAGCAGGGATTCAGAAAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGCAGAGGGGAAGAAGAGGGGTATAAAGCAGGGATTCAGAAAGGT  250

seq1  ATAGGACTTTATAACTAATTGCACAAGAAATGGGATGAGTTTCTGTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGACTTTATAACTAATTGCACAAGAAATGGGATGAGTTTCTGTTTAT  300

seq1  CCTAGGTATTTCCTCTTTGCCTGATTAGTCTTTTCATGATTATAAATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTATTTCCTCTTTGCCTGATTAGTCTTTTCATGATTATAAATAAC  350

seq1  TTAACCTTCAAATATTAATCAAAAGATAAAGAGAGGGAGAGAGACAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTTCAAATATTAATCAAAAGATAAAGAGAGGGAGAGAGACAGAGA  400

seq1  AGGGGAAAGGATGTTGCTCCAGTCCCCAGCTTCAAGAAGACATTAGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAAGGATGTTGCTCCAGTCCCCAGCTTCAAGAAGACATTAGCATG  450

seq1  TCTTGTGCTATAAGGAAAGAAATTGTAAGTATCCTGCTGTGAAAAAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGCTATAAGGAAAGAAATTGTAAGTATCCTGCTGTGAAAAAGTAA  500

seq1  TGTAATCTCTCATTTAAAAATGATGTGTTGAAGGAGATGCACACATGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCTCTCATTTAAAAATGATGTGTTGAAGGAGATGCACACATGCAA  550

seq1  GGAAGGTCAATGATCAGATTATTGCATGGTCAGGAGTTCAAGGAAATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTCAATGATCAGATTATTGCATGGTCAGGAGTTCAAGGAAATGTT  600

seq1  GATCAGGAAAGCACTGATTTGAGAATTGTCAGTGTGGATGGTAACCCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGGAAAGCACTGATTTGAGAATTGTCAGTGTGGATGGTAACCCAAG  650

seq1  TTATAGAAACTGTAAAATCACAAAGCCAGGAAGTGTGGAAATCCATAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAAACTGTAAAATCACAAAGCCAGGAAGTGTGGAAATCCATAGAT  700

seq1  CATGAGGCTGATGCCCTTGAGGGACCCAAAATGACAGCCAGTCCCCATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGCTGATGCCCTTGAGGGACCCAAAATGACAGCCAGTCCCCATGA  750

seq1  ATGACCAAGATGAGGGGCACTTATAAAAGAATCCTGGAAAGAATAGGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAAGATGAGGGGCACTTATAAAAGAATCCTGGAAAGAATAGGCCA  800

seq1  AAGTCTTGGCAGTGGGAAGGACACTGCCGCTGACGTCCCACTGAAA-GGC  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGTCTTGGCAGTGGGAAGGACACTGCCGCTGACGTCCCACTGAAAGGGC  850

seq1  AGTATGG-CCAGGAACATGGCCA-GGAAAGTCAAGGGCTTCTAACA-TTC  896
      ||||||| ||||||||||||||| |||||||||||||||||||||| |||
seq2  AGTATGGCCCAGGAACATGGCCAGGGAAAGTCAAGGGCTTCTAACATTTC  900

seq1  AAATACAGAGAAAGGTGCCTGTTGAAGTCCAGCCACTTGTAAG-ATGTTG  945
      ||||||||||||||||||||||||||||||||||||||||||| ||| ||
seq2  AAATACAGAGAAAGGTGCCTGTTGAAGTCCAGCCACTTGTAAGAATGGTG  950

seq1  CTTCTGTCAGCTTGGTCATGTC-TTTCCA-TGC-ATCACA--GCCAAGAA  990
      |||||||||||| | ||||||| |||||| ||| ||||||   |||||||
seq2  CTTCTGTCAGCTGGTTCATGTCTTTTCCATTGCAATCACAAGCCCAAGAA  1000

seq1  CAGG--AAAAATATATGATGTATCAGGAAGAT-GTGTAGA  1027
      ||||  |||||||||||||||||   |||||| |||||||
seq2  CAGGGAAAAAATATATGATGTATTCAGAAGATGGTGTAGA  1040


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