BAC Information

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BAC

Clone NameB6Ng01-189N11
Chromosome10 (Build37)
Map Location 104,767,459 - 104,881,729
singlet/doubletdoublet
Overlap geneTmtc2
Upstream geneLOC100042383
Downstream geneEG627573, BC067068, Ccdc59, EG667758, EG639162
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189N11.bB6Ng01-189N11.g
ACCGA013755GA013756
length1,165821
definitionB6Ng01-189N11.b B6Ng01-189N11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,767,459 - 104,768,637)(104,880,919 - 104,881,729)
sequence
gaattccaaatcttcaaatgtgacctttttgccttgagttcttaaaaggg
tctttaaaaccacgtgaaatatgagctatcccaaagagacaataaataaa
gttcacgagcagctgaaaagtcaagccttctgtaccatgcagtccagcat
ctctaagtgatggctacgctaacttcagggagagcaggttgccactaatg
gacagctctgcatgttctaactggaggagaaatactccacataattaatt
gcctttttttttgagtaaggaaaaatccatagaacttgtacattatatta
atatgttaactagtgcccattagcctagcatcaaacaatgaacagaggat
ttttttcaattcattgtttcattacggaaacagacgtgcaaacaatcaca
acagcgtgtcagtcgtggctcaagaaagggcagcatcttgggaagccagt
gaaggagcacgctttcccacaaagggcaagtcagatgaagttcctagaga
agaaaaaagacaaaggagagagcctggaacgctgagaacagcattccaca
cagaactaccggggctatgaaatgccagagtcacaaagggtggcatttaa
aatctaacaatagcaataataacaggattcatgaaaattaaaatgacata
atctacataggaggaagcatctgagaacatgaaaatccaagacaactgaa
aattaagaccgtgcaactgagaacaggttgactgtgaacagccgcacttc
tcccaggcaaacagtcagattacagtgtttcctcacagtggctcaccgcg
tgatctagaaacactaagctcagttgtgaaagaaaataacgtctctatct
gcagctgaaatcatcttgtgagctttattttatttgatcatcctttaaca
tacagaggaactttaaaagtaaccctcctctgagacaccaaaaaaaattc
cagaactttttttttttgttctgaagcaatttacatgtgtgaaaatttcc
taatagtatattacataagtcaggattatgttcgacttgcattactcatc
atctcatcaatttgctatgagctgcctctataatagattttatatcaatt
attatgacctgagactagagatgaattccactcttttcaacgtatggctc
acgtttaaggcaatg
gaattccaagttgacatcagaaggagttttatttgaaaaaggaaattgag
ctataaataccagtggattcagaaaagatttataatgggacaagaccagt
tggaaatgtgagaggggatggatgttcaccactcttcccccctcgctgaa
cccaagctcaagggcgggggtggggggattgccagatgcagtcagccatg
ggaggggagagaagctgtgcagagccaagacacaggagggaacactgagg
ccatttgtagagtaactttgatttttccattcaacttagagttctccctt
cttcacgggtgcttgccctgtctgtggtggggctttcttctttgcttctt
gtggactttatagataattgcttcctttcctcatcctttctcttcccaac
agtcagtctgctatatccccagcatggcaggattagggaaaaactgaagc
atcatcccaaatgtgtatatttccatgtattgcacggtataattattcaa
ataatcaatggggcactttgtgggacacaactttgagaagcccaggagtt
ttgcttaagagaaaaatttttgtttattagagctttcataatttgtttat
tcataattaatatacatttctgattttgtatattttattaaacagtgaag
tacatgtatgaatacacagaacacatatgcacatatacaatctacatgta
tatacacatatacagaacacacttatacacacgcatacatcatccctgtt
tgctgggtatttgccctagattttttttttccagtttcagtacacaaaag
aacaaaattgatcatgaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_104767459_104768637
seq2: B6Ng01-189N11.b_43_1207

seq1  GAATTCCAAATCTTCAAATGTGACCTTTTTGCCTTGAGTTCTTAAAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATCTTCAAATGTGACCTTTTTGCCTTGAGTTCTTAAAAGGG  50

seq1  TCTTTAAAACCACGTGAAATATGAGCTATCCCAAAGAGACAATAAATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAAACCACGTGAAATATGAGCTATCCCAAAGAGACAATAAATAAA  100

seq1  GTTCACGAGCAGCTGAAAAGTCAAGCCTTCTGTACCATGCAGTCCAGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACGAGCAGCTGAAAAGTCAAGCCTTCTGTACCATGCAGTCCAGCAT  150

seq1  CTCTAAGTGATGGCTACGCTAACTTCAGGGAGAGCAGGTTGCCACTAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGTGATGGCTACGCTAACTTCAGGGAGAGCAGGTTGCCACTAATG  200

seq1  GACAGCTCTGCATGTTCTAACTGGAGGAGAAATACTCCACATAATTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTCTGCATGTTCTAACTGGAGGAGAAATACTCCACATAATTAATT  250

seq1  GCCTTTTTTTTTGAGTAAGGAAAAATCCATAGAACTTGTACATTATATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTTTTTTGAGTAAGGAAAAATCCATAGAACTTGTACATTATATTA  300

seq1  ATATGTTAACTAGTGCCCATTAGCCTAGCATCAAACAATGAACAGAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTAACTAGTGCCCATTAGCCTAGCATCAAACAATGAACAGAGGAT  350

seq1  TTTTTTCAATTCATTGTTTCATTACGGAAACAGACGTGCAAACAATCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAATTCATTGTTTCATTACGGAAACAGACGTGCAAACAATCACA  400

seq1  ACAGCGTGTCAGTCGTGGCTCAAGAAAGGGCAGCATCTTGGGAAGCCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGTGTCAGTCGTGGCTCAAGAAAGGGCAGCATCTTGGGAAGCCAGT  450

seq1  GAAGGAGCACGCTTTCCCACAAAGGGCAAGTCAGATGAAGTTCCTAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGCACGCTTTCCCACAAAGGGCAAGTCAGATGAAGTTCCTAGAGA  500

seq1  AGAAAAAAGACAAAGGAGAGAGCCTGGAACGCTGAGAACAGCATTCCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAGACAAAGGAGAGAGCCTGGAACGCTGAGAACAGCATTCCACA  550

seq1  CAGAACTACCGGGGCTATGAAATGCCAGAGTCACAAAGGGTGGCATTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACTACCGGGGCTATGAAATGCCAGAGTCACAAAGGGTGGCATTTAA  600

seq1  AATCTAACAATAGCAATAATAACAGGATTCATGAAAATTAAAATGACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAACAATAGCAATAATAACAGGATTCATGAAAATTAAAATGACATA  650

seq1  ATCTACATAGGAGGAAGCATCTGAGAACATGAAAATCCAAGACAACTGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACATAGGAGGAAGCATCTGAGAACATGAAAATCCAAGACAACTGAA  700

seq1  AATTAAGACCGTGCAACTGAGAACAGGTTGACTGTGAACAGCCGCACTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGACCGTGCAACTGAGAACAGGTTGACTGTGAACAGCCGCACTTC  750

seq1  TCCCAGGCAAACAGTCAGATTACAGTGTTTCCTCACAGTGGCTCACCGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCAAACAGTCAGATTACAGTGTTTCCTCACAGTGGCTCACCGCG  800

seq1  TGATCTAGAAACACTAAGCTCAGTTGTGAAAGAAAATAACGTCTCTATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTAGAAACACTAAGCTCAGTTGTGAAAGAAAATAACGTCTCTATCT  850

seq1  GCAGCTGAAATCATCTTGTGAGCTTTATTTTATTTGATCATCCTTTAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGAAATCATCTTGTGAGCTTTATTTTATTTGATCATCCTTTAACA  900

seq1  TACAGAGGAACTTTAAAAGTAACCCTCCCTCTGAGACACC-AAAAAAATT  949
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  TACAGAGGAACTTTAAAAGTAACCCT-CCTCTGAGACACCAAAAAAAATT  949

seq1  CCAGAACTTTTTTTTT---GTCTGAAGCAATTTACATGTGTG-AAATTTC  995
      ||||||||||||||||    |||||||||||||||||||||| |||||||
seq2  CCAGAACTTTTTTTTTTTGTTCTGAAGCAATTTACATGTGTGAAAATTTC  999

seq1  CTAATAGTAATTAATTAACATAAGTCAGAATTATGTTCGAACTTTGCATT  1045
      |||||||||  ||  | ||||||||||| |||||||||||   |||||||
seq2  CTAATAGTA--TA--TTACATAAGTCAGGATTATGTTCGA--CTTGCATT  1043

seq1  AACTCAATCATCTCAATCAAATTTGCTAATTGAGCTGCCTCTAATAATAA  1095
       |||| |||||||| ||| |||||||||  |||||||||||| ||||| |
seq2  -ACTC-ATCATCTC-ATC-AATTTGCTA--TGAGCTGCCTCT-ATAAT-A  1085

seq1  GATTTTATATCATTTAGGTATGACTTGAGACTAGAGATGAATTTCTACTC  1145
      |||||||||||| |||  |||||| |||||||||||||||| ||| ||||
seq2  GATTTTATATCAATTA-TTATGACCTGAGACTAGAGATGAA-TTCCACTC  1133

seq1  TTTTTTCAAAACGTAT-GCTCACTTTTAA-GCAATG  1179
      ||||     ||||||| |||||| ||||| ||||||
seq2  TTTT----CAACGTATGGCTCACGTTTAAGGCAATG  1165

seq1: chr10_104880919_104881729
seq2: B6Ng01-189N11.g_69_888 (reverse)

seq1  AATTCATGATC-ATTTTGCTCTTTTGTGTACTGAAACTGG-AAAAAAAAA  48
      ||||||||||| |||||| ||||||||||||||||||||| |||||||||
seq2  AATTCATGATCAATTTTGTTCTTTTGTGTACTGAAACTGGAAAAAAAAAA  50

seq1  TCTAGGGC-AATA-CCAGCAAACAGGGATGATGTATGCGTGTGTATAAGT  96
      |||||||| |||| ||||||||||||||||||||||||||||||||||||
seq2  TCTAGGGCAAATACCCAGCAAACAGGGATGATGTATGCGTGTGTATAAGT  100

seq1  GTGTTCTGTATATGTGTATATACATGTAGATTGTATATGTGCATATGTGT  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTGTATATGTGTATATACATGTAGATTGTATATGTGCATATGTGT  150

seq1  TCTGTGTATTCATACATGTACTTCACTG-TTAAT-AAATATAC-AAATCA  193
      |||||||||||||||||||||||||||| ||||| |||||||| ||||||
seq2  TCTGTGTATTCATACATGTACTTCACTGTTTAATAAAATATACAAAATCA  200

seq1  GAAATGTATATTAATTATGAATAAACAAATTATGAAAGCTCTAAT-AACA  242
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAAATGTATATTAATTATGAATAAACAAATTATGAAAGCTCTAATAAACA  250

seq1  AAAATTTTTCTCTTAAGC-AAACTCCTGGGCTTCTCAAAGTTGTGTCCCA  291
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAATTTTTCTCTTAAGCAAAACTCCTGGGCTTCTCAAAGTTGTGTCCCA  300

seq1  CAAAGTGCCCCATTGATTATTTGAATAATTATACCGTGCAATACATGGAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGCCCCATTGATTATTTGAATAATTATACCGTGCAATACATGGAA  350

seq1  ATATACACATTTGGGATGATGCTTCAGTTTTTCCCTAATCCTGCCATGCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACATTTGGGATGATGCTTCAGTTTTTCCCTAATCCTGCCATGCT  400

seq1  GGGGATATAGCAGACTGACTGTTGGGAAGAGAAAGGATGAGGAAAGGAAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATATAGCAGACTGACTGTTGGGAAGAGAAAGGATGAGGAAAGGAAG  450

seq1  CAATTATCTATAAAGTCCACAAGAAGCAAAGAAGAAAGCCCCACCACAGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATCTATAAAGTCCACAAGAAGCAAAGAAGAAAGCCCCACCACAGA  500

seq1  CAGGGCAAGCACCCGTGAAGAAGGGAGAACTCTAAGTTGAATGGAAAAAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCAAGCACCCGTGAAGAAGGGAGAACTCTAAGTTGAATGGAAAAAT  550

seq1  CAAAGTTACTCTACAAATGGCCTCAGTGTTCCCTCCTGTGTCTTGGCTCT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTACTCTACAAATGGCCTCAGTGTTCCCTCCTGTGTCTTGGCTCT  600

seq1  GCACAGCTTCTCTCCCCTCCCATGGCTGACTGCATCTGGCAATCCCCCCA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCTTCTCTCCCCTCCCATGGCTGACTGCATCTGGCAATCCCCCCA  650

seq1  CCCCCGCCCTTGAGCTTGGGTTCAGCGAGGGGGGAAGAGTGGTGAACATC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGCCCTTGAGCTTGGGTTCAGCGAGGGGGGAAGAGTGGTGAACATC  700

seq1  CATCCCCTCTCACATTTCCAACTGGTCTTGTCCCATTATAAATCTTTTCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCTCTCACATTTCCAACTGGTCTTGTCCCATTATAAATCTTTTCT  750

seq1  GAATCCACTGGTATTTATAGCTCAATTTCCTTTTTCAAATAAAACTCCTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCACTGGTATTTATAGCTCAATTTCCTTTTTCAAATAAAACTCCTT  800

seq1  CTGATGTCAACTTGGAATTC  811
      ||||||||||||||||||||
seq2  CTGATGTCAACTTGGAATTC  820