BAC Information

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BAC

Clone NameB6Ng01-189N21
Chromosome10 (Build37)
Map Location 124,456,134 - 124,457,232
singlet/doubletsinglet
Overlap genenone
Upstream gene4930503E24Rik, LOC671416
Downstream geneSlc16a7, LOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994, Lrig3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189N21.bB6Ng01-189N21.g
ACCGA013773GA013774
length1,1051,148
definitionB6Ng01-189N21.b B6Ng01-189N21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactgagctccactgtattgcctgatctcaactgaatcaaactc
aatgaactgcctcatgtactctgtgctgctcttcagtggccctggcttcc
tgtctgttcgtgtgagtgttgggtgtgtcctatctctgattgattctgtc
aaatctatctctttcgctatcataactttgtctacttccccccattagaa
tttattctcaaacatggctactttgttttacaaactaagcttacctacat
tgtttggaattaaaggtgtatactgagggcatgtctctattccatctaga
gggattaaaagtatgtaattccagccagaactttggatataatcccttgc
cagagcagccattttctggattaaaaatcttctccagaactgaacttcat
aaattttatcacaaaagtttttgaacagaaaaaataattctaagtgaact
ttatgtgttgtgttgatgccaagataaatagaatgaaaagatgttagaaa
agtttgttatgaactgattaatgatatagaaatggggaaagtagtgtaat
taaagtccaatcacttacaagtgaatgagcaactattcattcattatttt
taattattattgatcccatcagttcacattatcaagtataaatacataag
taaaatcaaacctcactttcaaatcattttcttacagcatccatagagat
gtcgctataaatctccatgtgaggctacctttgtgcttccaagaagtgat
caacaacacattggagacaggtcctcgtgaatttaaactggtctttgaag
cattcagagaagtaaaactcatggaagcagactagtgatgagcagctcag
agaggttgcctgaagaaggagagatattggctaatatactcacttattgc
ttggatgagaatagcaagtgcagagctttatctcacatattatggcggat
ttaattataatgtaattaatgtattctacaagggcattcccaatgctact
taacagagaacattttaatgtctcagtccagtgagctgatagatattggg
aagaccaatacacaaggctaagaaactgatttactcgaagtgtgtgcttg
tacac
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggaatgctcacagtcagctaatggatggatcatagggctccc
aatggaggagctagagaagtagccaaggagctaaagggatctgcacctat
agtgaacacatatgagcttatcagtacccgagctctgactctagctgcat
atatatccaaagattgctagtcgccatcactggaaagagaggcccattga
cttgcaacttaatgccagtacaggtaatacaggccaaaataggggctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_124456134_124457232
seq2: B6Ng01-189N21.b_48_1152

seq1  GAATTCAACTGAGCTCCACTGTATTGCCTGATCTCAACTGAATCAAACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGAGCTCCACTGTATTGCCTGATCTCAACTGAATCAAACTC  50

seq1  AATGAACTGCCTCATGTACTCTGTGCTGCTCTTCAGTGGCCCTGGCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACTGCCTCATGTACTCTGTGCTGCTCTTCAGTGGCCCTGGCTTCC  100

seq1  TGTCTGTTCGTGTGAGTGTTGGGTGTGTCCTATCTCTGATTGATTCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTCGTGTGAGTGTTGGGTGTGTCCTATCTCTGATTGATTCTGTC  150

seq1  AAATCTATCTCTTTCGCTATCATAACTTTGTCTACTTCCCCCCATTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATCTCTTTCGCTATCATAACTTTGTCTACTTCCCCCCATTAGAA  200

seq1  TTTATTCTCAAACATGGCTACTTTGTTTTACAAACTAAGCTTACCTACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTCAAACATGGCTACTTTGTTTTACAAACTAAGCTTACCTACAT  250

seq1  TGTTTGGAATTAAAGGTGTATACTGAGGGCATGTCTCTATTCCATCTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGAATTAAAGGTGTATACTGAGGGCATGTCTCTATTCCATCTAGA  300

seq1  GGGATTAAAAGTATGTAATTCCAGCCAGAACTTTGGATATAATCCCTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTAAAAGTATGTAATTCCAGCCAGAACTTTGGATATAATCCCTTGC  350

seq1  CAGAGCAGCCATTTTCTGGATTAAAAATCTTCTCCAGAACTGAACTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAGCCATTTTCTGGATTAAAAATCTTCTCCAGAACTGAACTTCAT  400

seq1  AAATTTTATCACAAAAGTTTTTGAACAGAAAAAATAATTCTAAGTGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTATCACAAAAGTTTTTGAACAGAAAAAATAATTCTAAGTGAACT  450

seq1  TTATGTGTTGTGTTGATGCCAAGATAAATAGAATGAAAAGATGTTAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTTGTGTTGATGCCAAGATAAATAGAATGAAAAGATGTTAGAAA  500

seq1  AGTTTGTTATGAACTGATTAATGATATAGAAATGGGGAAAGTAGTGTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTATGAACTGATTAATGATATAGAAATGGGGAAAGTAGTGTAAT  550

seq1  TAAAGTCCAATCACTTACAAGTGAATGAGCAACTATTCATTCATTATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTCCAATCACTTACAAGTGAATGAGCAACTATTCATTCATTATTTT  600

seq1  TAATTATTATTGATCCCATCAGTTCACATTATCAAGTATAAATACATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTATTGATCCCATCAGTTCACATTATCAAGTATAAATACATAAG  650

seq1  TAAAATCAAACCTCACTTTCAAATCATTTTCTTACAGCATCCATAGAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCAAACCTCACTTTCAAATCATTTTCTTACAGCATCCATAGAGAT  700

seq1  GTCGCTATAAATCTCCATGTGAGGCTACCTTTGTGCTTCCAAGAAGTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGCTATAAATCTCCATGTGAGGCTACCTTTGTGCTTCCAAGAAGTGAT  750

seq1  CAACAACACATTGGAGACAGGTCCTCGTGAATTTAAACTGGTCTTTGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACACATTGGAGACAGGTCCTCGTGAATTTAAACTGGTCTTTGAAG  800

seq1  CATTCAGAGAAGTAAAACTCATGGAAGCAGACTAGTGATGAGCAGCTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CATTCAGAGAAGTAAAACTCATGGAAGCAGACTAGTGATGAGCAGCTCA-  849

seq1  GAGAGGTTGCCTGAAGAAGGAGAGATATTGGCTAATATACTCAC-TATTG  899
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAGAGGTTGCCTGAAGAAGGAGAGATATTGGCTAATATACTCACTTATTG  899

seq1  CTTGGATGAGAATAGCAAGTGCAGAGCTTTATCTCACATATTATGGCG--  947
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  CTTGGATGAGAATAGCAAGTGCAGAGCTTTATCTCACATATTATGGCGGA  949

seq1  ATTAATTATAATGTAA-TAATGTATTCTACAA-GGCATT-CCAATGCTAC  994
       ||||||||||||||| ||||||||||||||| |||||| ||||||||||
seq2  TTTAATTATAATGTAATTAATGTATTCTACAAGGGCATTCCCAATGCTAC  999

seq1  TT-ACAGAGAACATTTTAAATGTTCTCAGTCCAGTGAGCTGATAGATAT-  1042
      || |||||||||||||| |||| |||||||||||||||||||||||||| 
seq2  TTAACAGAGAACATTTT-AATG-TCTCAGTCCAGTGAGCTGATAGATATT  1047

seq1  -GGAAGA-CAATACAC-AGGCTAAGAAACTTGATTTACTCCAAAGTGTGT  1089
       |||||| |||||||| |||||||||||| ||||||||| | ||||||||
seq2  GGGAAGACCAATACACAAGGCTAAGAAAC-TGATTTACT-CGAAGTGTGT  1095

seq1  GCCTGTACAC  1099
      || |||||||
seq2  GCTTGTACAC  1105