BAC Information

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BAC

Clone NameB6Ng01-190G07
Chromosome10 (Build37)
Map Location 87,113,976 - 87,114,832
singlet/doubletsinglet
Overlap genenone
Upstream geneEG382395, Hsp90b1, Nt5dc3, Fabp3-ps1, C630002B14Rik, Stab2, 1700113H08Rik, Ascl1, Pah
Downstream geneLOC100041517, ENSMUSG00000058934, Igf1, Tyms-ps, Pmch, 4930547N16Rik, EG626115, Nup37, Ccdc53, LOC667000, 1200002N14Rik, Gnptab, Sycp3, Chpt1, 8030451F13Rik, LOC667046, LOC627414
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190G07.bB6Ng01-190G07.g
ACCGA014158GA014159
length235880
definitionB6Ng01-190G07.b B6Ng01-190G07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctacctggttacaggaggtggccatttcagtctctatatctctcctgttg
gtaggagtctcaactagggtcacccccatagattccctggaacttcccct
gtcccaagtctctagctactcccagagctggcccccatagatatgcctga
atctcactcagaaggagaaagaaaaatcgtcattggagataaacagaggg
agggaactgagtgggagggggtaaggaggggaatg
gaattcacatgctctcctaggatctgaagccacctaagacatggcttaaa
aagccagcattgtcaatttgtctcccttgtgcattcactgacctgtggct
tgcgtattggcctcatgaatccaatgtgtgtaaacccatttcttttttcc
tcgcctttcccacttcctcctgatgctcaagtaggtggcttctttaaggc
catggtcatccgtcttgcacgagatatagaaagtgaccattcatgggacg
tgcagcctcaaggtctagaagtggctccattgagtcgtctcttcagagtc
tatactatgttttagggacaaggcatatgaccgaaaagcgaccctaagca
agagatatgtggtttgtgtattaactggaattacataaagcagttatcca
aaactaacacaatccataaagtgtttagggtgatgtaaagaaggagggat
acaaagtggaaacctctggggtagttcacatagaagggcatgggatacat
gtcaggtgtgtccacatcatctggagtagggaggggggaatgaaggatga
tataaagacttatggacttagaaaaaaaatagaggtgagatttcatggtg
acaaaaaagcagttaagttatgacaaatgatgtgaaagaccaaaaagtgc
cagtccccatgtttttttggtggcacagttaatgcatccaatataaatta
ggcttcataattaggttttcaaaggacaccaaagatcattcctttttgtg
tcaaacacccattcatcccaaaaggacgggaaagccctggccctggagtc
ccctctaatcttataccttaaattgacattccatcccctctcccaaattt
tggtgcttctttttccttccttccccttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_87113976_87114832
seq2: B6Ng01-190G07.g_68_947

seq1  GAATTCACATGCTCTCCTAGGATCTGAAGCCACCTAAGACATGGCTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATGCTCTCCTAGGATCTGAAGCCACCTAAGACATGGCTTAAA  50

seq1  AAGCCAGCATTGTCAATTTGTCTCCCTTGTGCATTCACTGACCTGTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGCATTGTCAATTTGTCTCCCTTGTGCATTCACTGACCTGTGGCT  100

seq1  TGCGTATTGGCCTCATGAATCCAATGTGTGTAAACCCATTTCTTTTTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTATTGGCCTCATGAATCCAATGTGTGTAAACCCATTTCTTTTTTCC  150

seq1  TCGCCTTTCCCACTTCCTCCTGATGCTCAAGTAGGTGGCTTCTTTAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCTTTCCCACTTCCTCCTGATGCTCAAGTAGGTGGCTTCTTTAAGGC  200

seq1  CATGGTCATCCGTCTTGCACGAGATATAGAAAGTGACCATTCATGGGACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCATCCGTCTTGCACGAGATATAGAAAGTGACCATTCATGGGACG  250

seq1  TGCAGCCTCAAGGTCTAGAAGTGGCTCCATTGAGTCGTCTCTTCAGAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCTCAAGGTCTAGAAGTGGCTCCATTGAGTCGTCTCTTCAGAGTC  300

seq1  TATACTATGTTTTAGGGACAAGGCATATGACCGAAAAGCGACCCTAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTATGTTTTAGGGACAAGGCATATGACCGAAAAGCGACCCTAAGCA  350

seq1  AGAGATATGTGGTTTGTGTATTAACTGGAATTACATAAAGCAGTTATCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATATGTGGTTTGTGTATTAACTGGAATTACATAAAGCAGTTATCCA  400

seq1  AAACTAACACAATCCATAAAGTGTTTAGGGTGATGTAAAGAAGGAGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAACACAATCCATAAAGTGTTTAGGGTGATGTAAAGAAGGAGGGAT  450

seq1  ACAAAGTGGAAACCTCTGGGGTAGTTCACATAGAAGGGCATGGGATACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGGAAACCTCTGGGGTAGTTCACATAGAAGGGCATGGGATACAT  500

seq1  GTCAGGTGTGTCCACATCATCTGGAGTAGGGAGGGGGGAATGAAGGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTGTGTCCACATCATCTGGAGTAGGGAGGGGGGAATGAAGGATGA  550

seq1  TATAAAGACTTATGGACTTAGAAAAAAAATAGAGGTGAGATTTCATGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGACTTATGGACTTAGAAAAAAAATAGAGGTGAGATTTCATGGTG  600

seq1  AC-AAAAAGCAG-TAAGTTATGACAAATGATGTGAAAGACC-AAAAGTGC  647
      || ||||||||| |||||||||||||||||||||||||||| ||||||||
seq2  ACAAAAAAGCAGTTAAGTTATGACAAATGATGTGAAAGACCAAAAAGTGC  650

seq1  CAGT-CCCATG--TTTTTGGTGGCACAG-TAATGCAT-CAATAT-AATTA  691
      |||| ||||||  ||||||||||||||| |||||||| |||||| |||||
seq2  CAGTCCCCATGTTTTTTTGGTGGCACAGTTAATGCATCCAATATAAATTA  700

seq1  GGCTTCATAATTAGG-TTTCAAAGGACACC-AAGATCATTCC-TTTTGTG  738
      ||||||||||||||| |||||||||||||| ||||||||||| |||||||
seq2  GGCTTCATAATTAGGTTTTCAAAGGACACCAAAGATCATTCCTTTTTGTG  750

seq1  T-AAACA-CCATTCAT-CCAAAAGGACGGGAAAGCCCTGG-CCTGGAGT-  783
      | ||||| |||||||| ||||||||||||||||||||||| |||||||| 
seq2  TCAAACACCCATTCATCCCAAAAGGACGGGAAAGCCCTGGCCCTGGAGTC  800

seq1  CCCTCTAATCTTATAC--TTAATTGACATTCCATCCCCTCTCCCAA--TT  829
      ||||||||||||||||  | ||||||||||||||||||||||||||  ||
seq2  CCCTCTAATCTTATACCTTAAATTGACATTCCATCCCCTCTCCCAAATTT  850

seq1  TTGTGCTTCTTTTT-CTTCCTT-CTCTTTA  857
      | |||||||||||| ||||||| | |||||
seq2  TGGTGCTTCTTTTTCCTTCCTTCCCCTTTA  880