BAC Information

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BAC

Clone NameB6Ng01-191K07
Chromosome10 (Build37)
Map Location 105,456,563 - 105,549,970
singlet/doubletdoublet
Overlap geneEG667758
Upstream geneTmtc2, EG627573, BC067068, Ccdc59
Downstream geneEG639162, Ppfia2, Olfr1556-ps1, 8430416H19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191K07.bB6Ng01-191K07.g
ACCGA015083GA015084
length1,1671,140
definitionB6Ng01-191K07.b B6Ng01-191K07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,548,762 - 105,549,970)(105,456,563 - 105,457,703)
sequence
gaattctgcataggagaatttgtggaatatgctgtacagtcagtctaaga
ctgatgtgtgaattgctctcatatgatccactttgaaatttcagggtaaa
tagcaggaagaaattgtacagtgctgttggtagatatctgaaagactcta
ccaaaatggaaacacttctacataaaatctctttttaagagctaattaaa
aattgtttattagaactcaaaaactcaaattatcattgctctgtccaaaa
taaaaataatgacctatgatttcaacgcagagcataataaagctaataat
aaggttacagaaaatctagagttaccaaagatattggtcgcaaacaggtt
ttcaagtttggtgtctcttctgaggaactggaactaaatgctctgttttt
catacgtctagaacatatttattctaatggacatgttcaatgttccaagt
tcagagttcacacctgagagctatgcaatcaagttaagaaaaattgcacg
cacgcacacacacacacacacacacacacacacacacacacacacaaatt
cacatcaaagactcccatacatgtttttaagaaagattccaatttgaggt
ttaactatattcatagatattctgggctgcaagaggctcacggttcacag
gttgttcatatatcactctgtaatctctggaaacagagaacaaaatgtaa
caccccccccccctttctcaaaaagaatatcctcagtattttggaaactg
agaccttcaaattttcaattctatcagagacaggcccataaacaaaggaa
atcaaaaacagaaaataatgatcaagaataacaataacaaaacgaaacaa
aacacagatttgcagctacaaaagatcatttttgtttgtttgtcaaacag
ctacacttttattatcaattatcagtctcacaacaaaccacccctcaatt
tcatggctatgccttttatttgctaacagtttgtgggaagtctcagttgt
tccattcacatcaaatccacttcgagtctgagcagagtccactcagcagc
ttcctagtcatgtgctgagtctgatgttcttggttccttccgtctcccat
gctttattcctaggctgcactggatacaccttcgactgcatgatcaagta
attgaacctgcatgtca

gaattctcattgttcttagagtcaagtggagaaatcctgtccttgctact
gtctgccaggctcttgtccacctgctcagttgtctgtcagactctctgtt
agctaatgatgctactacacaaactcactctcacttctattggaatttct
ttttcattttcttttctttcttttttttaaccttctttcactcatttgaa
tagttctaaataacaaaatgtaaacttttagcaagtttaaatatgaagag
tcagaaagcatataaaatgtcttggagttttctagagaaaattcattgcc
acacagtcagacccacatctatgaacaggccatgttttctttagtgcaaa
catggttccaagttcatacccagccagccttgttgcccaagagagtagat
aatgttgtatgagctgttaccttcaaaaacaattcccctggttccaattc
actgtgcaatagttgctgttaatgcagtatttcgggtataggtttatttt
tgtgtatgattatatatatttggttgcacatatttgtatatgtgtatgtg
aaagacagaggacaaccttgtatgtctttttaagtagtatacttttcttt
tctcttactggcctgactgaccagaagccccagggattcgctgaactttt
taatcccctggttttgtgttatgactcattatttttttattcttacctac
aagaggtttttgttgtggtggtggttgttttgccacgttgtatggagaat
actttgggaattgaatcttaataaacttaattaaccaagacattccaatg
catagaagaaaaaaaaagaaaggtttttacaaatgtaatttgatagattt
aaatccaatatattggccactggactgacagttttataagtactaatggg
aaaataaagttcaagttttgttttcttctctggctcctcctccttcgtgt
gtgtgttgggattagaaatctgagctgtatgcatgcatgccataataatg
caatggattttactcagctgtaaagaagattggaattcagaagcttgcat
gtaattaacaaggacaaaatttaaaaaggttatactgagagttatatcag
acccagggcacattacatgtctatctccatacatgatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_105548762_105549970
seq2: B6Ng01-191K07.b_45_1211 (reverse)

seq1  TGACATTGCAGGGGTGCAATTACATTGAAATTTCATGCAGTCAGAAGGGG  50
      ||||| ||||  ||| ||||||| ||||    |||||||||| |||  ||
seq2  TGACA-TGCA--GGTTCAATTAC-TTGA----TCATGCAGTC-GAA--GG  39

seq1  TGTACTCAGTGCCAAGACCTTAGAGAAATAAATAGCATGTGGAGACAGAA  100
      ||||  ||||||  || |||   || |||||  |||||| |||||| |||
seq2  TGTATCCAGTGC--AG-CCT---AGGAATAA--AGCATG-GGAGACGGAA  80

seq1  AGAAAACAAAGAACATCAAGACACCAGCCACATGACTAAAGAAAGCTGCT  150
       |  ||| ||||||||| ||||  ||| |||||||||  || ||||||||
seq2  GG--AACCAAGAACATC-AGAC-TCAG-CACATGACT--AGGAAGCTGCT  123

seq1  TGGAAGTGGGACCTCCTGCCTCAGAACTCCGAAGTGGATTTGATGTGAAT  200
          ||| ||||   ||| ||||| ||| |||||||||||||||||||||
seq2  ---GAGT-GGAC--TCTG-CTCAG-ACT-CGAAGTGGATTTGATGTGAAT  164

seq1  GGAACAACTGAGACTTCCCACAAAACTTGTTAGCAAAATAAAAAGGGCAT  250
      ||||||||||||||||||||||||   ||||||| ||||||||  |||||
seq2  GGAACAACTGAGACTTCCCACAAA--CTGTTAGC-AAATAAAA--GGCAT  209

seq1  AAGCCATGAAATTGAGGGGTGGTTTGTTGTGAGACTGATAATTGATAATA  300
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AGCCATGAAATTGAGGGGTGGTTTGTTGTGAGACTGATAATTGATAATA  258

seq1  AAAGTGTAGCTGTTTGACAAACAAACAAAAATGATCTTTTGTAGCTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTAGCTGTTTGACAAACAAACAAAAATGATCTTTTGTAGCTGCAA  308

seq1  ATCTGTGTTTTGTTTCGTTTTGTTATTGTTATTCTTGATCATTATTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGTTTTGTTTCGTTTTGTTATTGTTATTCTTGATCATTATTTTCT  358

seq1  GTTTTTGATTTCCTTTGTTTATGGGCCTGTCTCTGATAGAATTGAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGATTTCCTTTGTTTATGGGCCTGTCTCTGATAGAATTGAAAATT  408

seq1  TGAAGGTCTCAGTTTCCAAAATACTGAGGATATTCTTTTTGAGAAAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTCTCAGTTTCCAAAATACTGAGGATATTCTTTTTGAGAAAGGGG  458

seq1  GGGGGGGTGTTACATTTTGTTCTCTGTTTCCAGAGATTACAGAGTGATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGTGTTACATTTTGTTCTCTGTTTCCAGAGATTACAGAGTGATAT  508

seq1  ATGAACAACCTGTGAACCGTGAGCCTCTTGCAGCCCAGAATATCTATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAACCTGTGAACCGTGAGCCTCTTGCAGCCCAGAATATCTATGAA  558

seq1  TATAGTTAAACCTCAAATTGGAATCTTTCTTAAAAACATGTATGGGAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTAAACCTCAAATTGGAATCTTTCTTAAAAACATGTATGGGAGTC  608

seq1  TTTGATGTGAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGTGAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  658

seq1  GTGTGCGTGCGTGCAATTTTTCTTAACTTGATTGCATAGCTCTCAGGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCGTGCGTGCAATTTTTCTTAACTTGATTGCATAGCTCTCAGGTGT  708

seq1  GAACTCTGAACTTGGAACATTGAACATGTCCATTAGAATAAATATGTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCTGAACTTGGAACATTGAACATGTCCATTAGAATAAATATGTTCT  758

seq1  AGACGTATGAAAAACAGAGCATTTAGTTCCAGTTCCTCAGAAGAGACACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTATGAAAAACAGAGCATTTAGTTCCAGTTCCTCAGAAGAGACACC  808

seq1  AAACTTGAAAACCTGTTTGCGACCAATATCTTTGGTAACTCTAGATTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGAAAACCTGTTTGCGACCAATATCTTTGGTAACTCTAGATTTTC  858

seq1  TGTAACCTTATTATTAGCTTTATTATGCTCTGCGTTGAAATCATAGGTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCTTATTATTAGCTTTATTATGCTCTGCGTTGAAATCATAGGTCA  908

seq1  TTATTTTTATTTTGGACAGAGCAATGATAATTTGAGTTTTTGAGTTCTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTATTTTGGACAGAGCAATGATAATTTGAGTTTTTGAGTTCTAA  958

seq1  TAAACAATTTTTAATTAGCTCTTAAAAAGAGATTTTATGTAGAAGTGTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATTTTTAATTAGCTCTTAAAAAGAGATTTTATGTAGAAGTGTTT  1008

seq1  CCATTTTGGTAGAGTCTTTCAGATATCTACCAACAGCACTGTACAATTTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTGGTAGAGTCTTTCAGATATCTACCAACAGCACTGTACAATTTC  1058

seq1  TTCCTGCTATTTACCCTGAAATTTCAAAGTGGATCATATGAGAGCAATTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCTATTTACCCTGAAATTTCAAAGTGGATCATATGAGAGCAATTC  1108

seq1  ACACATCAGTCTTAGACTGACTGTACAGCATATTCCACAAATTCTCCTAT  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCAGTCTTAGACTGACTGTACAGCATATTCCACAAATTCTCCTAT  1158

seq1  GCAGAATTC  1209
      |||||||||
seq2  GCAGAATTC  1167


seq1: chr10_105456563_105457703
seq2: B6Ng01-191K07.g_65_1204

seq1  GAATTCTCATTGTTCTTAGAGTCAAGTGGAGAAATCCTGTCCTTGCTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTGTTCTTAGAGTCAAGTGGAGAAATCCTGTCCTTGCTACT  50

seq1  GTCTGCCAGGCTCTTGTCCACCTGCTCAGTTGTCTGTCAGACTCTCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCCAGGCTCTTGTCCACCTGCTCAGTTGTCTGTCAGACTCTCTGTT  100

seq1  AGCTAATGATGCTACTACACAAACTCACTCTCACTTCTATTGGAATTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATGATGCTACTACACAAACTCACTCTCACTTCTATTGGAATTTCT  150

seq1  TTTTCATTTTCTTTTCTTTCTTTTTTTTAACCTTCTTTCACTCATTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTTCTTTTCTTTCTTTTTTTTAACCTTCTTTCACTCATTTGAA  200

seq1  TAGTTCTAAATAACAAAATGTAAACTTTTAGCAAGTTTAAATATGAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTAAATAACAAAATGTAAACTTTTAGCAAGTTTAAATATGAAGAG  250

seq1  TCAGAAAGCATATAAAATGTCTTGGAGTTTTCTAGAGAAAATTCATTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGCATATAAAATGTCTTGGAGTTTTCTAGAGAAAATTCATTGCC  300

seq1  ACACAGTCAGACCCACATCTATGAACAGGCCATGTTTTCTTTAGTGCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTCAGACCCACATCTATGAACAGGCCATGTTTTCTTTAGTGCAAA  350

seq1  CATGGTTCCAAGTTCATACCCAGCCAGCCTTGTTGCCCAAGAGAGTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTCCAAGTTCATACCCAGCCAGCCTTGTTGCCCAAGAGAGTAGAT  400

seq1  AATGTTGTATGAGCTGTTACCTTCAAAAACAATTCCCCTGGTTCCAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGTATGAGCTGTTACCTTCAAAAACAATTCCCCTGGTTCCAATTC  450

seq1  ACTGTGCAATAGTTGCTGTTAATGCAGTATTTCGGGTATAGGTTTATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCAATAGTTGCTGTTAATGCAGTATTTCGGGTATAGGTTTATTTT  500

seq1  TGTGTATGATTATATATATTTGGTTGCACATATTTGTATATGTGTATGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGATTATATATATTTGGTTGCACATATTTGTATATGTGTATGTG  550

seq1  AAAGACAGAGGACAACCTTGTATGTCTTTTTAAGTAGTATACTTTTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGAGGACAACCTTGTATGTCTTTTTAAGTAGTATACTTTTCTTT  600

seq1  TCTCTTACTGGCCTGACTGACCAGAAGCCCCAGGGATTCGCTGAACTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTACTGGCCTGACTGACCAGAAGCCCCAGGGATTCGCTGAACTTTT  650

seq1  TAATCCCCTGGTTTTGTGTTATGACTCATTATTTTTTTATTCTTACCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCCTGGTTTTGTGTTATGACTCATTATTTTTTTATTCTTACCTAC  700

seq1  AAGAGGTTTTTGTTGTGGTGGTGGTTGTTTTGCCACGTTGTATGGAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTTTTTGTTGTGGTGGTGGTTGTTTTGCCACGTTGTATGGAGAAT  750

seq1  ACTTTGGGAATTGAATCTTAATAAACTTAATTAACCAAGACATTCCAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGGAATTGAATCTTAATAAACTTAATTAACCAAGACATTCCAATG  800

seq1  CATAGAAGAAAAAAAAAGAAAGGTTTTTACAAATGTAATTTGATAGATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAAGAAAAAAAAAGAAAGGTTTTTACAAATGTAATTTGATAGATTT  850

seq1  AAATCCAATATATTGGCCACTGGACTGACAGTTTTATAAGTACTAATGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAATATATTGGCCACTGGACTGACAGTTTTATAAGTACTAATGGG  900

seq1  AAAATAAAGTTC-AGTTTTGTTTTCTTCTCTGGCTCCTCCTCCTTCGTGT  949
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAGTTCAAGTTTTGTTTTCTTCTCTGGCTCCTCCTCCTTCGTGT  950

seq1  GTGTGTTGGGATTAGAAATCTGAGGCTGTATGCATGCATGCCATA--TAT  997
      ||||||||||||||||||||||| |||||||||||||||||||||   ||
seq2  GTGTGTTGGGATTAGAAATCTGA-GCTGTATGCATGCATGCCATAATAAT  999

seq1  GCAATGGAATTTTACTCAGCTGTAAAGAAGAATGGAATCAGGAAGCTTGC  1047
      ||||||| ||||||||||||||||||||||| ||||||   |||||||||
seq2  GCAATGG-ATTTTACTCAGCTGTAAAGAAGATTGGAATTCAGAAGCTTGC  1048

seq1  ATGTAAATAAACAAGACAAAATTTAAAAAAG-TATACTGAGAGGTATAAT  1096
      |||||| |||  | ||||||||||||||| | ||||||||||| ||| ||
seq2  ATGTAATTAACAAGGACAAAATTTAAAAAGGTTATACTGAGAGTTAT-AT  1097

seq1  CAGACCCAGGCAAACATTACATGTTCTATCT-CATACATGGATCCT  1141
      ||||||||||   |||||||||| ||||||| ||||||| ||||||
seq2  CAGACCCAGG-GCACATTACATG-TCTATCTCCATACAT-GATCCT  1140


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