BAC Information

Click to search

BAC

Clone NameB6Ng01-192F18
Chromosome10 (Build37)
Map Location 101,650,224 - 101,651,351
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneMgat4c, LOC667652, Nts, Pamci, LOC382413, Cart1, Lrriq1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192F18.bB6Ng01-192F18.g
ACCGA015618GA015619
length1,2181,107
definitionB6Ng01-192F18.b B6Ng01-192F18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttaaaatacttttctccagtagaaaactccaggcccatatca
aacgcaaactaatgtctgccttgaagtgcttggttatccccgttatagca
tctttgcctggaaacatctttgtgtttttaaatagctaaggtttcatttc
ccaggtaattctaataaacatttggtaagataaaggtaaggctgttcatt
ttgcaatttctctattgaaaggaacatctgcctgtattagaccttgtgtt
ggtacagttattttctgtattttccaaatacccccgtgtgttgtgtttgt
gtgtgtgtgtccttggagaagcagtgtagttcataagctctatgtaggta
ccagttctacttgtctatgataagtgcattgggtgggcattgccacccaa
tggagccccagtgtcagtttgtagagagcaatccattgtcttggcatcag
actgggtgtttggtgatttctaagggacccttttgcctaacaactcagtt
taatacaacccagttctgggaactgaaaccttgtttgatggcaagagatg
gtcaattgagactgtctctcccattataacgatatatcattaggatcact
ttcatatactttaaaaaagttgttactactccagttttctataccacgtc
tcaaatgtccctcaatttcaggagttgtcacacctatattcttgtatctt
tggtgaaaggagatatacttcaggctaccaaatgaaaaacataaattcca
acacagtcataaaaatttgccctacactctgtcttgcctgcaacaggcac
tagtagcacaagaatgtgtgagaatagccaatctgtgtctggtttgacta
agacccacttcatgagatgaaaatcctacccaacactacttgaatgacca
aagggcaggagacaggtaaccaagagacctagggcaaactaaattactat
tgggcctaaaaaattatacataaaatggttgtaaatgatattctactaca
cttagaagtttactgcattattcattcatcatcagcgtggcttcttctta
tgcagacagaaacacataagaactcacattcaggatattatcagaaaaag
gagagtctttggatattcaatagcacttaagtggagaataagtgcttaca
attcctccttcgtagttcagaattcttcggaaaagggagacgcgaaagag
tatatgagctatctcctg
gaattcactcacagtttcctctttggtgatcacaaatgtctacatacata
ttcactgattcagtcacacgtaagcaggagagcagtgtttacagtatatt
ccttttcattagattggactgtcaagcaggaaagaataaagattgaagag
ttaggttaaatacatatagtttttagtgtcctggtgtagtttaaaagtga
gccatatgtaataggtgtatgtgtttgaacctgtggtgcttttgtttgga
gaaggtgttagtactggttggggaggttggaaaacctttgaaaatatagc
tggtatattagaactcacaactagaggaatctttgacaatatctaactct
ggttctgatccacctttccgattcttgatggtaaagtataagatgccctt
gccaacatagaatcatccagtcagctttcatgacttcctttagcatggtg
ggctgcctctagttgcatgagctaaaatgtattttcttactttaaaaaat
tctgtcaagtattttaacaataacaaaaaagtgctcaatacaccatctga
agtaaatgaaatttcccttttcatatgataaaagcatagcgtaaaattca
gaatacatgatctgagaccaggtgaccagagcaagtcataaacaaagaca
ttctgtaacttcttgcttagagaactcctacccactggtttgtgttataa
aactaaccagagaagagtggtgtggattatgttaacatacttggagagga
atttttaagtagctttatgattttgttctttgtcaatcactgttgaaaga
acatcattttgttaggggaagagttttattttactatatttatccatgca
gagaaataattagcaaaactataccatcttgctgaagtcaacagacttta
agaagtcccataacaccctaagggttttaacaacctaatttcaaaataaa
agtatccttacagagagttgtacttggtattaatagctgtcatttccaaa
ttggctattattggtcagtgaaatactctgcctcacacaaactttctaag
tcaaatgaagtcgattgcgaagactaaagtccaagaaactcactaggaga
atacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_101650224_101651351
seq2: B6Ng01-192F18.g_66_1172

seq1  GAATTCACTCACAGTTTCCTCTTTGGTGATCACAAATGTCTACATACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCACAGTTTCCTCTTTGGTGATCACAAATGTCTACATACATA  50

seq1  TTCACTGATTCAGTCACACGTAAGCAGGAGAGCAGTGTTTACAGTATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGATTCAGTCACACGTAAGCAGGAGAGCAGTGTTTACAGTATATT  100

seq1  CCTTTTCATTAGATTGGACTGTCAAGCAGGAAAGAATAAAGATTGAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCATTAGATTGGACTGTCAAGCAGGAAAGAATAAAGATTGAAGAG  150

seq1  TTAGGTTAAATACATATAGTTTTTAGTGTCCTGGTGTAGTTTAAAAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTAAATACATATAGTTTTTAGTGTCCTGGTGTAGTTTAAAAGTGA  200

seq1  GCCATATGTAATAGGTGTATGTGTTTGAACCTGTGGTGCTTTTGTTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATATGTAATAGGTGTATGTGTTTGAACCTGTGGTGCTTTTGTTTGGA  250

seq1  GAAGGTGTTAGTACTGGTTGGGGAGGTTGGAAAACCTTTGAAAATATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGTTAGTACTGGTTGGGGAGGTTGGAAAACCTTTGAAAATATAGC  300

seq1  TGGTATATTAGAACTCACAACTAGAGGAATCTTTGACAATATCTAACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATATTAGAACTCACAACTAGAGGAATCTTTGACAATATCTAACTCT  350

seq1  GGTTCTGATCCACCTTTCCGATTCTTGATGGTAAAGTATAAGATGCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGATCCACCTTTCCGATTCTTGATGGTAAAGTATAAGATGCCCTT  400

seq1  GCCAACATAGAATCATCCAGTCAGCTTTCATGACTTCCTTTAGCATGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACATAGAATCATCCAGTCAGCTTTCATGACTTCCTTTAGCATGGTG  450

seq1  GGCTGCCTCTAGTTGCATGAGCTAAAATGTATTTTCTTACTTTAAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTCTAGTTGCATGAGCTAAAATGTATTTTCTTACTTTAAAAAAT  500

seq1  TCTGTCAAGTATTTTAACAATAACAAAAAAGTGCTCAATACACCATCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAAGTATTTTAACAATAACAAAAAAGTGCTCAATACACCATCTGA  550

seq1  AGTAAATGAAATTTCCCTTTTCATATGATAAAAGCATAGCGTAAAATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGAAATTTCCCTTTTCATATGATAAAAGCATAGCGTAAAATTCA  600

seq1  GAATACATGATCTGAGACCAGGTGACCAGAGCAAGTCATAAACAAAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACATGATCTGAGACCAGGTGACCAGAGCAAGTCATAAACAAAGACA  650

seq1  TTCTGTAACTTCTTGCTTAGAGAACTCCTACCCACTGGTTTGTGTTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAACTTCTTGCTTAGAGAACTCCTACCCACTGGTTTGTGTTATAA  700

seq1  AACTAACCAGAGAAGAGTGGTGTGGATTATGTTAACATACTTGGAGAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACCAGAGAAGAGTGGTGTGGATTATGTTAACATACTTGGAGAGGA  750

seq1  ATTTTTAAGTAGCTTTATGATTTTGTTCTTTGTCAATCACTGTTGAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAGTAGCTTTATGATTTTGTTCTTTGTCAATCACTGTTGAAAGA  800

seq1  ACATCATTTTGTTAGGGGAAGAGTTTTATTTTACTATATTTATCCATGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATTTTGTTAGGGGAAGAGTTTTATTTTACTATATTTATCCATGCA  850

seq1  GAGAAATAATTAGCAAAACTATACCATCTTGCTGAAGTCAACAGACTTAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAGAAATAATTAGCAAAACTATACCATCTTGCTGAAGTCAACAGACTTTA  900

seq1  AGAAGTCCCATAACACCCTAAGGG-TTTAACAACCTAATTTCAAATAAAA  949
      |||||||||||||||||||||||| ||||||||||||||||||||  |||
seq2  AGAAGTCCCATAACACCCTAAGGGTTTTAACAACCTAATTTCAAAATAAA  950

seq1  GGTATCCTTACAGAGAGTTGTACCTGGTATTAAATAGCTGTTCATTTCCA  999
       |||||||||||||||||||||| ||||||| |||||||| |||||||| 
seq2  AGTATCCTTACAGAGAGTTGTACTTGGTATT-AATAGCTG-TCATTTCC-  997

seq1  AAATTGGCTTATTATTTGTCAGTGAAATACTCTGCCTCACAACAAAAACC  1049
      |||||||| ||||||| ||||||||||||||||||||||| |||||   |
seq2  AAATTGGC-TATTATTGGTCAGTGAAATACTCTGCCTCAC-ACAAA---C  1042

seq1  TTTCTAAAAGTCAAAAAGGAAGTCAGATTGGCAGAAGACTAAAAAGGTCA  1099
      |||||  |||||  ||| |||||| |||||   ||||||||||   ||| 
seq2  TTTCT--AAGTC--AAATGAAGTC-GATTG--CGAAGACTAAA---GTCC  1082

seq1  AAAGAAAACTCACTAGGAAGATATACACA  1128
      ||   |||||||||||| ||| |||||||
seq2  AA--GAAACTCACTAGG-AGA-ATACACA  1107