BAC Information

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BAC

Clone NameB6Ng01-192G09
Chromosome10 (Build37)
Map Location 10,152,921 - 10,154,108
singlet/doubletsinglet
Overlap genenone
Upstream geneE130306M17Rik, LOC666658, LOC620417, Stxbp5, LOC100039238, LOC665110, 9130014G24Rik
Downstream geneRab32, EG382450, Grm1, Shprh, Fbxo30, Epm2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192G09.bB6Ng01-192G09.g
ACCGA015648GA015649
length1,1821,201
definitionB6Ng01-192G09.b B6Ng01-192G09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttctaaaggaaaggatgtatcttgtcagtctgcattgttagca
acatgcttggcagtgtagactgtgcttccactctggggtggaaggggcta
tgatatgtctcttcgttgactaattaatgtacatgtaaatttactagcca
gacaaggaaagcacacataggcataagaaccagcgcagagcgtggtttct
ggttaatggcaactttatgtcacactgccaggtctactctttcacaggat
agacagatatttctcatttctgttctactgtcaaagtttcactaaggatt
cctcatgctcatcttgagttgccatgcaagagacttaatatgcagcctca
tggtcatgtcaacatagcctctgcagtggaaatggtaaaaccgctctact
ttgggaagaacagagtcacacagattgtattaacaagttggcagaaagct
atactataaaatatgagtattttatgtttagtaaatcaatggaaaatttc
aagctttcaagtaaatacttcctaaaatgtgacctacttgtccaaagaaa
acaacaaaaattgtatcttcatgctgtcaaaatacatgtaaaagtttaat
attgggtctactcatgcattttttataaacaaaaaaaagcatctagcttg
taagataacatttctttatgctgtggtgtgcagttgctaggattccctac
attgattactatgatgctctgtagagtgctccctactcattattcattgc
tatgtgtttccaaatgctggtaactgtaataactaacatgtattcttttt
ttttttttccagcgtccatgtagcacacaggagagagctaggagaactca
cagtaatccacgctctgactgggtggttgcctgaagtcatccctcttcag
taggtttttcaaaagatattcatctatttatatctatctatctatctatc
tatctatctatctatccatctatctatctatctatctacctattcatcca
tccacccacccaccccacccatctctatctatccatctatcaatctatct
atctatctatccatctatctatctatcgatccatctagctacaatttacc
atcatccattggcctaaggaagtgggtgtgccagggaaagttcaggacca
atatgttgtgctcaggaatccaactgatcaac
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaatcctgagat
ttcaccgcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
acatgctggcgaggatgtggagaaagaaggacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagcactatcagaggatccagcaatacctctcctgggc
atatatccagaagatgttccaactggtaagaaggatatatgctccactat
gttcatagcagccttatttataatagccagaagctgaaaagaaaccagat
gcccctgaacagaggaatggatacagaaaatgtggtacatttatacaagg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcaacctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtactcactgataagtggatattatcccagaaac
ttagaatacccaagatacaagatacaatttgtaaaacatatgaaactcaa
aaataacggagaccaaagtgtggccactttgccccttcttagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgaaacg
aaaagatggaccatctagagaatgccacaaccggggacccatcccataat
cagcttccaaacactgacaccattgcatacaccagcaagattttgctgaa
atgaccctgataaagctgtctcttgtgaggatatgccgggtgtctggcaa
cacagaagtggatgcttcacagtcagcaatgggatgggacacaggtcctc
cagtggagggagctaagagaaagtacccaagagctaaagggaatctgcac
ccctattagtggaacaacatttatgaacctaaccagtaccccttcagagc
tcgagttctctagctgcatattgtaagcagaggatgctagttgccatcaa
ttggagagagagtcctgtctggcacttatatgccctagtacagaactcaa
gggctcagaaattggtgattgtggtgtataggctagatcacgcgctatcc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_10152921_10154108
seq2: B6Ng01-192G09.b_47_1228 (reverse)

seq1  GTTGATCTGAGTTTGATTCCTGGAACCCACATATT-GTCCTCTGACTTCC  49
      |||||||  |||| ||||||||    | ||||||| |||||     ||||
seq2  GTTGATC--AGTTGGATTCCTGAGCACAACATATTGGTCCTGAACTTTCC  48

seq1  CTGGCACA-CCACTCCCTAAGCCCAATAGATAGATAGATAAATAGATAGA  98
      |||||||| ||||| ||| || ||||| ||| ||| | ||||| | ||| 
seq2  CTGGCACACCCACTTCCTTAGGCCAATGGAT-GAT-GGTAAATTG-TAGC  95

seq1  TAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGA-TGATA  147
      ||||| ||| ||||||||||||||| |||||||||||||||||| |||||
seq2  TAGATGGATCGATAGATAGATAGATGGATAGATAGATAGATAGATTGATA  145

seq1  GATGGATAGATAGAGATGGGT-GGGTGGGTGGGTGGATGGATGAATAGGT  196
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GATGGATAGATAGAGATGGGTGGGGTGGGTGGGTGGATGGATGAATAGGT  195

seq1  AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG  246
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGATGGATAGATAGATAGATAGATAGATAGATAG  245

seq1  ATAGATAGATAATAAATAGATGAATATCTTTTTGAAAAACCTACTGAAGA  296
      ||||||     ||||||||||||||||| |||||||||||||||||||||
seq2  ATAGAT-----ATAAATAGATGAATATC-TTTTGAAAAACCTACTGAAGA  289

seq1  GGGATGACTTCAGGCAACCACCCAGTCAGAGCGTGGATTACTGTGAGTTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGACTTCAGGCAACCACCCAGTCAGAGCGTGGATTACTGTGAGTTC  339

seq1  TCCTAGCTCTCTCCTGTGTGCTACATGGACGCTGG-AAAAAAAAAAAAGA  395
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCCTAGCTCTCTCCTGTGTGCTACATGGACGCTGGAAAAAAAAAAAAAGA  389

seq1  ATACATGTTAGTTATTACAGTTACCAGCATTTGGAAACACATAGCAATGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGTTAGTTATTACAGTTACCAGCATTTGGAAACACATAGCAATGA  439

seq1  ATAATGAGTAGGGAGCACTCTACAGAGCATCATAGTAATCAATGTAGGGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAGTAGGGAGCACTCTACAGAGCATCATAGTAATCAATGTAGGGA  489

seq1  ATCCTAGCAACTGCACACCACAGCATAAAGAAATGTTATCTTACAAGCTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGCAACTGCACACCACAGCATAAAGAAATGTTATCTTACAAGCTA  539

seq1  GATGCTTTTTTTTGTTTATAAAAAATGCATGAGTAGACCCAATATTAAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTTTTTTTGTTTATAAAAAATGCATGAGTAGACCCAATATTAAAC  589

seq1  TTTTACATGTATTTTGACAGCATGAAGATACAATTTTTGTTGTTTTCTTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATGTATTTTGACAGCATGAAGATACAATTTTTGTTGTTTTCTTT  639

seq1  GGACAAGTAGGTCACATTTTAGGAAGTATTTACTTGAAAGCTTGAAATTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAGTAGGTCACATTTTAGGAAGTATTTACTTGAAAGCTTGAAATTT  689

seq1  TCCATTGATTTACTAAACATAAAATACTCATATTTTATAGTATAGCTTTC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGATTTACTAAACATAAAATACTCATATTTTATAGTATAGCTTTC  739

seq1  TGCCAACTTGTTAATACAATCTGTGTGACTCTGTTCTTCCCAAAGTAGAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACTTGTTAATACAATCTGTGTGACTCTGTTCTTCCCAAAGTAGAG  789

seq1  CGGTTTTACCATTTCCACTGCAGAGGCTATGTTGACATGACCATGAGGCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTTACCATTTCCACTGCAGAGGCTATGTTGACATGACCATGAGGCT  839

seq1  GCATATTAAGTCTCTTGCATGGCAACTCAAGATGAGCATGAGGAATCCTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTAAGTCTCTTGCATGGCAACTCAAGATGAGCATGAGGAATCCTT  889

seq1  AGTGAAACTTTGACAGTAGAACAGAAATGAGAAATATCTGTCTATCCTGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAACTTTGACAGTAGAACAGAAATGAGAAATATCTGTCTATCCTGT  939

seq1  GAAAGAGTAGACCTGGCAGTGTGACATAAAGTTGCCATTAACCAGAAACC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTAGACCTGGCAGTGTGACATAAAGTTGCCATTAACCAGAAACC  989

seq1  ACGCTCTGCGCTGGTTCTTATGCCTATGTGTGCTTTCCTTGTCTGGCTAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCTGCGCTGGTTCTTATGCCTATGTGTGCTTTCCTTGTCTGGCTAG  1039

seq1  TAAATTTACATGTACATTAATTAGTCAACGAAGAGACATATCATAGCCCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTACATGTACATTAATTAGTCAACGAAGAGACATATCATAGCCCC  1089

seq1  TTCCACCCCAGAGTGGAAGCACAGTCTACACTGCCAAGCATGTTGCTAAC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCCCAGAGTGGAAGCACAGTCTACACTGCCAAGCATGTTGCTAAC  1139

seq1  AATGCAGACTGACAAGATACATCCTTTCCTTTAGAAGGAATTC  1188
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGACTGACAAGATACATCCTTTCCTTTAGAAGGAATTC  1182