BAC Information

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BAC

Clone NameB6Ng01-192O14
Chromosome10 (Build37)
Map Location 82,293,276 - 82,438,474
singlet/doubletdoublet
Overlap geneTxnrd1, Eid3, EG216185
Upstream geneEG666501, 1700123A16Rik, LOC666753, EG666537, BC062127, EG666542, EG666548, EG666790, LOC666571, AL117821, BC062115, 4933439G19Rik, BC024063, AU041133, LOC100042712, B230315N10Rik, LOC100042718, EG237412, LOC666611, Gm1553, LOC544716, 1190007I07Rik, Tdg, Glt8d2, Hcfc2, Nfyb, 1700028I16Rik
Downstream geneChst11, Slc41a2, D10Wsu102e, LOC666748, Aldh1l2, A230046K03Rik, Appl2, 1500009L16Rik, LOC100041225
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-192O14.bB6Ng01-192O14.g
ACCGA016026GA016027
length1,1331,062
definitionB6Ng01-192O14.b B6Ng01-192O14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,437,342 - 82,438,474)(82,293,276 - 82,294,333)
sequence
gaattctcaagcttgtgacatactactttgaccctgtctgtggctttctt
tgtgtttgcctttccttatattctgactcttaaaaagacccctgttgctg
gatttagggtctactcagataatcctgggtaatggagatctataacatac
ccgctgaacaagtcacatctacagttcccagggttacagtgtggacatct
tctcagtggccgcccttgagatcactacagacaggaaatcaaaacagttt
tcacagaataagtgatctgtcatgtgggtgctgggaattgaacctgggtc
ctttggaagaacaaccattgctcttaaccactgagctatctcttcggggc
ccctcaaaaggccttcttaatggcctctatcattagggttggtgagggaa
tgcctctggcccctcaaaatgatatttcccagaaatactgctgagttgac
tgacaggtatctggaacaaaaatcttattctgtgagtttagatctcaaat
attcaagatgttaagtactctttatgataatgactaatctgctctctgaa
aataaaattaagaccgctgatcagccacagaagagcagtgaatgctaatt
aggaacagcaggatatgagttcccaaagccgcagacccagctgggagtga
tactgctcagagagaggttctggagagctcgccttatatacctcagagta
aggacagagcatgaggctcagatttcattccatctggcaccagcccagag
caaatcactccccttcacggggtcagtacctgcctgagatgaaccccaag
aaagcaacatgctgatagacaaaggtttggttaagcctgtgtaaggatct
gatatggtgacctctttagcaggaacactatgcaggggaagggacttcac
tctttcctgcctagatttaatttgctaaggtcaatgctatgtagataaga
atgtggcggttttacaacaaggcttattgctcagagtgttgaattttaac
ccagccaatcatgaaaatcatccctgtgtgacagatttcaaccgcacagc
tttgttagccagagcatcaatccaagttcaccacctcatgccagacagga
tgtacttttctcagctcagtatcggacctctga
gaattcctgtgaagtagatagttataggcagtgacatttattcccctcgt
tctgaagtctggagattccaactcagtgtcccagaagatcccatgggtgg
tgagggcccacttcctagttcataaacagtgcagttttgctgtgtcctta
tatagagaaaggcacaaggggcacttaggggtttatacctgtatgaatcc
cattagtgaggggtcttatccacctcagagacacctgtctcctaccacct
tcacttcggcagttaacactttttatttttattatttatttatttattta
tttattttggtttttcgagacagggtttctctgtgtagccctggctatcc
tggaactcactctgtagaccaggctggcctcgaactcagaaatctgcctg
cctctgcctcccaagtgctgggattaaaggcatacgccaccacgcccagc
ttttttttttttttttttgctttttatttttatttttatttttttggggg
ggcaattaacactttaacacaaattttttcccataagcatttaaagtcac
atcaccagtatccaaatgtcaagggaatttctatgtcattttgcattttt
atctgtctctctgtccactctccatccatccagtcttccaaccccatcca
catttgctttttacagtaaccagaactgagctcagattcttgcgtgtgct
aggtgagtgctctccgttgaactgtctccctggccctttctctgtatttt
taatatttggtgtaaaaagccattcaggctctggctccctggatgttgat
ggttccctggctgttggttcaatccctgtgagcccctggtgagcccaggc
tagttgaatctgtgggttttcttgtgatgttgataataagttcttgaccc
ctgtgaagcctaccggtctccccctccccgcccccttgttccagatttcc
caagcctctgctggatgtttgggctgtgggtagaaaagtttaagttttaa
taaattggctttaaatggcttttatataattatacataatcctgaactta
catatacttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_82437342_82438474
seq2: B6Ng01-192O14.b_45_1177 (reverse)

seq1  TCAGAGGGTCCCGATAACTGGAGCTGAG-AAAGTACATCTTGGTTCTGGG  49
      |||||||   ||||| ||| |||||||| |||||||||| ||  ||| ||
seq2  TCAGAGG--TCCGAT-ACT-GAGCTGAGAAAAGTACATCCTG--TCT-GG  43

seq1  CATTTGGAGGTGGTG-ACTTGGATTGGATGCTCTTGGCTAACATAGCTGT  98
      |||   ||||||||| ||||||||| ||||||| ||||||||| ||||||
seq2  CAT---GAGGTGGTGAACTTGGATT-GATGCTC-TGGCTAACAAAGCTGT  88

seq1  GCGGTTTGAAATCTGTCACACA-GGATGA-TTTCATGATTGGCTTGGTTA  146
      |||| ||||||||||||||||| |||||| |||||||||||||| |||||
seq2  GCGG-TTGAAATCTGTCACACAGGGATGATTTTCATGATTGGCTGGGTTA  137

seq1  AAATTCAACACTCTGAGC-ATAAG-CTTGTTGTAAAACCG-CACCTTCTT  193
      |||||||||||||||||| ||||| ||||||||||||||| ||| |||||
seq2  AAATTCAACACTCTGAGCAATAAGCCTTGTTGTAAAACCGCCACATTCTT  187

seq1  ATCTACATAGCATTGA-CTTAGC-AATTAAATCTAGGCA-GAAAGAGTG-  239
      |||||||||||||||| |||||| ||||||||||||||| ||||||||| 
seq2  ATCTACATAGCATTGACCTTAGCAAATTAAATCTAGGCAGGAAAGAGTGA  237

seq1  AGTCCCTTCCCCTGCATAGTGTTCCTGCT-AAGAGGTCACCATATCAGAT  288
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGTCCCTTCCCCTGCATAGTGTTCCTGCTAAAGAGGTCACCATATCAGAT  287

seq1  CCTTACACAGGCTTAACC-AACCTTTGTCTATCAGCATGTTGCTTTCTTG  337
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCTTACACAGGCTTAACCAAACCTTTGTCTATCAGCATGTTGCTTTCTTG  337

seq1  GGGTTCATCTCAGGCAGGTACTGACCCCGTGAAGGGGAGTGATTTGCTCT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCATCTCAGGCAGGTACTGACCCCGTGAAGGGGAGTGATTTGCTCT  387

seq1  GGGCTGGTGCCAGATGGAATGAAATCTGAGCCTCATGCTCTGTCCTTACT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGTGCCAGATGGAATGAAATCTGAGCCTCATGCTCTGTCCTTACT  437

seq1  CTGAGGTATATAAGGCGAGCTCTCCAGAACCTCTCTCTGAGCAGTATCAC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTATATAAGGCGAGCTCTCCAGAACCTCTCTCTGAGCAGTATCAC  487

seq1  TCCCAGCTGGGTCTGCGGCTTTGGGAACTCATATCCTGCTGTTCCTAATT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCTGGGTCTGCGGCTTTGGGAACTCATATCCTGCTGTTCCTAATT  537

seq1  AGCATTCACTGCTCTTCTGTGGCTGATCAGCGGTCTTAATTTTATTTTCA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCACTGCTCTTCTGTGGCTGATCAGCGGTCTTAATTTTATTTTCA  587

seq1  GAGAGCAGATTAGTCATTATCATAAAGAGTACTTAACATCTTGAATATTT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGATTAGTCATTATCATAAAGAGTACTTAACATCTTGAATATTT  637

seq1  GAGATCTAAACTCACAGAATAAGATTTTTGTTCCAGATACCTGTCAGTCA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCTAAACTCACAGAATAAGATTTTTGTTCCAGATACCTGTCAGTCA  687

seq1  ACTCAGCAGTATTTCTGGGAAATATCATTTTGAGGGGCCAGAGGCATTCC  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCAGTATTTCTGGGAAATATCATTTTGAGGGGCCAGAGGCATTCC  737

seq1  CTCACCAACCCTAATGATAGAGGCCATTAAGAAGGCCTTTTGAGGGGCCC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCAACCCTAATGATAGAGGCCATTAAGAAGGCCTTTTGAGGGGCCC  787

seq1  CGAAGAGATAGCTCAGTGGTTAAGAGCAATGGTTGTTCTTCCAAAGGACC  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGAGATAGCTCAGTGGTTAAGAGCAATGGTTGTTCTTCCAAAGGACC  837

seq1  CAGGTTCAATTCCCAGCACCCACATGACAGATCACTTATTCTGTGAAAAC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCAATTCCCAGCACCCACATGACAGATCACTTATTCTGTGAAAAC  887

seq1  TGTTTTGATTTCCTGTCTGTAGTGATCTCAAGGGCGGCCACTGAGAAGAT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGATTTCCTGTCTGTAGTGATCTCAAGGGCGGCCACTGAGAAGAT  937

seq1  GTCCACACTGTAACCCTGGGAACTGTAGATGTGACTTGTTCAGCGGGTAT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACACTGTAACCCTGGGAACTGTAGATGTGACTTGTTCAGCGGGTAT  987

seq1  GTTATAGATCTCCATTACCCAGGATTATCTGAGTAGACCCTAAATCCAGC  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAGATCTCCATTACCCAGGATTATCTGAGTAGACCCTAAATCCAGC  1037

seq1  AACAGGGGTCTTTTTAAGAGTCAGAATATAAGGAAAGGCAAACACAAAGA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGGTCTTTTTAAGAGTCAGAATATAAGGAAAGGCAAACACAAAGA  1087

seq1  AAGCCACAGACAGGGTCAAAGTAGTATGTCACAAGCTTGAGAATTC  1133
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACAGACAGGGTCAAAGTAGTATGTCACAAGCTTGAGAATTC  1133

seq1: chr10_82293276_82294333
seq2: B6Ng01-192O14.g_69_1130

seq1  GAATTCCTGTGAAGTAGATAGTTATAGGCAGTGACATTTATTCCCCTCGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGAAGTAGATAGTTATAGGCAGTGACATTTATTCCCCTCGT  50

seq1  TCTGAAGTCTGGAGATTCCAACTCAGTGTCCCAGAAGATCCCATGGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGTCTGGAGATTCCAACTCAGTGTCCCAGAAGATCCCATGGGTGG  100

seq1  TGAGGGCCCACTTCCTAGTTCATAAACAGTGCAGTTTTGCTGTGTCCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGCCCACTTCCTAGTTCATAAACAGTGCAGTTTTGCTGTGTCCTTA  150

seq1  TATAGAGAAAGGCACAAGGGGCACTTAGGGGTTTATACCTGTATGAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGAAAGGCACAAGGGGCACTTAGGGGTTTATACCTGTATGAATCC  200

seq1  CATTAGTGAGGGGTCTTATCCACCTCAGAGACACCTGTCTCCTACCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGTGAGGGGTCTTATCCACCTCAGAGACACCTGTCTCCTACCACCT  250

seq1  TCACTTCGGCAGTTAACACTTTTTATTTTTATTATTTATTTATTTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCGGCAGTTAACACTTTTTATTTTTATTATTTATTTATTTATTTA  300

seq1  TTTATTTTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTGGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTATCC  350

seq1  TGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTG  400

seq1  CCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATACGCCACCACGCCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATACGCCACCACGCCCAGC  450

seq1  TTTTTTTTTTTTTTTTTTGCTTTTTATTTTTATTTTTATTTTTTTGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTGCTTTTTATTTTTATTTTTATTTTTTTGGGGG  500

seq1  GGCAATTAACACTTTAACACAAATTTTTTCCCATAAGCATTTAAAGTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATTAACACTTTAACACAAATTTTTTCCCATAAGCATTTAAAGTCAC  550

seq1  ATCACCAGTATCCAAATGTCAAGGGAATTTCTATGTCATTTTGCATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAGTATCCAAATGTCAAGGGAATTTCTATGTCATTTTGCATTTTT  600

seq1  ATCTGTCTCTCTGTCCACTCTCCATCCATCCAGTCTTCCAACCCCATCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCTCTCTGTCCACTCTCCATCCATCCAGTCTTCCAACCCCATCCA  650

seq1  CATTTGCTTTTTACAGTAACCAGAACTGAGCTCAGATTCTTGCGTGTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCTTTTTACAGTAACCAGAACTGAGCTCAGATTCTTGCGTGTGCT  700

seq1  AGGTGAGTGCTCTCCGTTGAACTGTCTCCCTGGCCCTTTCTCTGTATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGTGCTCTCCGTTGAACTGTCTCCCTGGCCCTTTCTCTGTATTTT  750

seq1  TAATATTTGGTGTAAAAAGCCATTCAGGCTCTGGCTCCCTGGATGTTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTGGTGTAAAAAGCCATTCAGGCTCTGGCTCCCTGGATGTTGAT  800

seq1  GGTTCCCTGGCTGTTGGTTCAATCCCTGTGAGCCCCT-GTGAGCCCAGGC  849
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGTTCCCTGGCTGTTGGTTCAATCCCTGTGAGCCCCTGGTGAGCCCAGGC  850

seq1  TAGTTGATTCTGTGGGTTTTCTTGTGATG-TGAT-ATAAGTTCTTGACCC  897
      ||||||| ||||||||||||||||||||| |||| |||||||||||||||
seq2  TAGTTGAATCTGTGGGTTTTCTTGTGATGTTGATAATAAGTTCTTGACCC  900

seq1  CTGTGAAGCCTACC-GTCTCCCCCTCCCCGCCCCCTTGTCCAGGATTCCC  946
      |||||||||||||| |||||||||||||||||||||||| |  |||| ||
seq2  CTGTGAAGCCTACCGGTCTCCCCCTCCCCGCCCCCTTGTTCCAGATTTCC  950

seq1  CAAG-CTCTGCTGAATGTTT-GGCTGTGGGTAGTAGAGTTT-AGTTTTAA  993
      |||| |||||||| |||||| |||||||||||| | ||||| ||||||||
seq2  CAAGCCTCTGCTGGATGTTTGGGCTGTGGGTAGAAAAGTTTAAGTTTTAA  1000

seq1  TTAATTGGCTTTAAAATTGCTTTTATAATAATTATTACATATTCATGACC  1043
      | |||||||||| |||| |||||||| ||||||| |||||| || ||| |
seq2  TAAATTGGCTTT-AAATGGCTTTTAT-ATAATTA-TACATAATCCTGAAC  1047

seq1  TAACATATACTTCAA  1058
      | |||||||||||||
seq2  TTACATATACTTCAA  1062