BAC Information

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BAC

Clone NameB6Ng01-194M22
Chromosome10 (Build37)
Map Location 110,719,183 - 110,720,332
singlet/doubletsinglet
Overlap geneOsbpl8
Upstream geneLOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17, EG432502, LOC667904
Downstream geneBbs10, Nap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2, Kcnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194M22.bB6Ng01-194M22.g
ACCGA017400GA017401
length1,1071,132
definitionB6Ng01-194M22.b B6Ng01-194M22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactatgtagctcaggctggccttcaattcaagggatcctcctgc
atcagagtcccgaatgctgagatgataagaattaaccctgaccccctggt
atagagctgctgattcaaaacagcagaaattggtgggtttggtgatgcag
atttgtaatctgagttcctaggaggcagaggtaaggagagctgaagttcc
aggccagtttaggctacagcaagaccctctcttaaacaaagcaagtaaaa
caaaatcgaacagccttgaatgtatcccttcacagttacagaagccagga
gtccaaaatgactctcagtaaatatcgtctctgggtagaactgtgtctgc
aagctccagagagatcgcccttccctggccttgctctgcggatacttggc
atctgtgccttgtggccacatcgctccaacttctgccttcttagctatgt
tgtttctcttctgtgtcctctctcatgtgtgttgtctccctctgtaccct
ctcaaaagatatgtgcaatggtctttagggcttacctgtacaatccagta
taatgtacctgtctcaaaattcttaatattaccacagtagcgaagggctt
ttgttgtggttgttgttgttgttgctgtgatttggatgtgtccctttccc
aggctatgggttaatggaggaaggagctctcacgaagcatctgggcttgc
ccagggtgtctcctctgagcactcatttgccttccgacttttccccatgg
cgtgatgacatgtggcatgtgatgatgatgacatgtgacatgtgatgaca
tgtgaccctggagctgcccccatgcttgtgggtctttatggtctctagaa
ctgagcacataaacatctctccttttagttatgtttgagacaggacctca
ctgagtagtttcgtggtagcctggaacttaattatgtagaccaggctggg
cctcaaactcagatctgcctgccttgaccttccctgagggtgggattaaa
gttacgttcaaccactccagattcttaaattattttgctttataataatt
caccatttcgtggaacctgaacatatgtctattgacaacctgcacggaaa
tgtcagt
gaattctttatggcacaatgaccctggagcttggtggaactgtcaatatt
acctgtcagaagactggatacagtgcgatacttgaatttaaactaaaggt
tggtaaaaggaggttgaaggaacactagcccactggacatgtggccctgc
agttcttgcccatctctccatttcctccttcttattaaaaaccgctacgt
tgcattcctaaagccagccaccaaggtctgttcccatatttgggtcagta
cctcctcctgaggctgcctatcaaggtcccagctaccaaaagaccccttt
gggtcatctaattaacaagcccaattatcattaaacacctcatcctaaca
cgggtttccactatatcttcacaaactgccatttttctgtgtgccacatc
tgtcttctctctgtccagaggcagttctttgtcccattttcaaacagata
acccagccccttctccgtgttcccttcccccttctccttcttcttcttct
tctgtctcctatctttgtcccttatccctgccctctgtccctctggggaa
aacaagtctcctttgtgctgagaacttgggagtcctgagctggtcctctt
cctgtcagtggtatttcctaactaagggaagctgtgctgtaaatactgaa
gggaaaaagtttagttgtgaaataagaactaaataaaaagcatgatttat
gtcaggtcaaagagaaatccatccgagggcattctctgtgagtatcttgg
tacaacctgagataaattaacattaacgccaccattccttttgttaattt
taatggtaaaacctggtgctatagaggaaataggacttaagtgtctgaat
tatctctgtgaattaaaacactgcttcacaaaaccccagaagggagaatg
aatgagactcgggttgtgtacagtaagacatttagattagttatatttct
gtgtaaaaatacttgaactccatgctatggatacgtgtgctcatcatatt
tatatgcccaaaaatttgtacgggcaatatagagatggcttgtcctcaga
aagtgtgagcacaggaagtctctggcaaaattggatgattagttgagacg
acctctgacgactggttcctatgagtctgccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110719183_110720332
seq2: B6Ng01-194M22.g_65_1196

seq1  GAATTCTTTATGGCACAATGACCCTGGAGCTTGGTGGAACTGTCAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATGGCACAATGACCCTGGAGCTTGGTGGAACTGTCAATATT  50

seq1  ACCTGTCAGAAGACTGGATACAGTGCGATACTTGAATTTAAACTAAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCAGAAGACTGGATACAGTGCGATACTTGAATTTAAACTAAAGGT  100

seq1  TGGTAAAAGGAGGTTGAAGGAACACTAGCCCACTGGACATGTGGCCCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAAGGAGGTTGAAGGAACACTAGCCCACTGGACATGTGGCCCTGC  150

seq1  AGTTCTTGCCCATCTCTCCATTTCCTCCTTCTTATTAAAAACCGCTACGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTGCCCATCTCTCCATTTCCTCCTTCTTATTAAAAACCGCTACGT  200

seq1  TGCATTCCTAAAGCCAGCCACCAAGGTCTGTTCCCATATTTGGGTCAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCCTAAAGCCAGCCACCAAGGTCTGTTCCCATATTTGGGTCAGTA  250

seq1  CCTCCTCCTGAGGCTGCCTATCAAGGTCCCAGCTACCAAAAGACCCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTGAGGCTGCCTATCAAGGTCCCAGCTACCAAAAGACCCCTTT  300

seq1  GGGTCATCTAATTAACAAGCCCAATTATCATTAAACACCTCATCCTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATCTAATTAACAAGCCCAATTATCATTAAACACCTCATCCTAACA  350

seq1  CGGGTTTCCACTATATCTTCACAAACTGCCATTTTTCTGTGTGCCACATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTTCCACTATATCTTCACAAACTGCCATTTTTCTGTGTGCCACATC  400

seq1  TGTCTTCTCTCTGTCCAGAGGCAGTTCTTTGTCCCATTTTCAAACAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCTCTCTGTCCAGAGGCAGTTCTTTGTCCCATTTTCAAACAGATA  450

seq1  ACCCAGCCCCTTCTCCGTGTTCCCTTCCCCCTTCTCCTTCTTCTTCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCCCCTTCTCCGTGTTCCCTTCCCCCTTCTCCTTCTTCTTCTTCT  500

seq1  TCTGTCTCCTATCTTTGTCCCTTATCCCTGCCCTCTGTCCCTCTGGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCCTATCTTTGTCCCTTATCCCTGCCCTCTGTCCCTCTGGGGAA  550

seq1  AACAAGTCTCCTTTGTGCTGAGAACTTGGGAGTCCTGAGCTGGTCCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTCTCCTTTGTGCTGAGAACTTGGGAGTCCTGAGCTGGTCCTCTT  600

seq1  CCTGTCAGTGGTATTTCCTAACTAAGGGAAGCTGTGCTGTAAATACTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAGTGGTATTTCCTAACTAAGGGAAGCTGTGCTGTAAATACTGAA  650

seq1  GGGAAAAAGTTTAGTTGTGAAATAAGAACTAAATAAAAAGCATGATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAAGTTTAGTTGTGAAATAAGAACTAAATAAAAAGCATGATTTAT  700

seq1  GTCAGGTCAAAGAGAAATCCATCCGAGGGCATTCTCTGTGAGTATCTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTCAAAGAGAAATCCATCCGAGGGCATTCTCTGTGAGTATCTTGG  750

seq1  TACAACCTGAGATAAATTAACATTAACGCCACCATTCCTTTTGTTAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCTGAGATAAATTAACATTAACGCCACCATTCCTTTTGTTAATTT  800

seq1  TAATGGTAAAACCTGGTGCTATAGAGGAAATAGGACTTAAGTGTCTGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTAAAACCTGGTGCTATAGAGGAAATAGGACTTAAGTGTCTGAAT  850

seq1  TATCTCTGTGAATTAAAACACTGCTTCACAAAACCCCAGAAGGGAGAAAT  900
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TATCTCTGTGAATTAAAACACTGCTTCACAAAACCCCAGAAGGGAG-AAT  899

seq1  GAATGAGACTCGGGTTGTGTACAGTAAGACAATTTTAGATTAGTTATTAT  950
      |||||||||||||||||||||||||||||||  ||||||||||||| |||
seq2  GAATGAGACTCGGGTTGTGTACAGTAAGACA--TTTAGATTAGTTA-TAT  946

seq1  TTCTGTGTAAAAAATTACTTTGAACTTCCATGCTTATGGATAACCGTGTG  1000
      |||||||||||||  ||| |||||| ||||||| ||||||||  ||||||
seq2  TTCTGTGTAAAAA--TAC-TTGAAC-TCCATGC-TATGGATA--CGTGTG  989

seq1  CTCATCATATTTATATG-CCAAAAATTTGTACGGGGCATATTAGAGATGG  1049
      ||||||||||||||||| |||||||||||||||||  ||| |||||||||
seq2  CTCATCATATTTATATGCCCAAAAATTTGTACGGGCAATA-TAGAGATGG  1038

seq1  CTTGT-CTCAGAAAGTGTTGAGCACCAGGAAGTCT-TGGAAAATATGAGT  1097
      ||||| ||||||||||| |||||| |||||||||| ||| |||  ||  |
seq2  CTTGTCCTCAGAAAGTG-TGAGCA-CAGGAAGTCTCTGGCAAAATTGGAT  1086

seq1  GATTAGTTGAGACCAGAACCTTCTAAAGACTTGGTCCCCTTATGAGTCTG  1147
      ||||||||||||| |    | ||| | |||| | |||   ||||||||||
seq2  GATTAGTTGAGACGA----CCTCTGACGACTGGTTCC---TATGAGTCTG  1129

seq1  CCG  1150
      |||
seq2  CCG  1132