BAC Information

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BAC

Clone NameB6Ng01-195K23
Chromosome10 (Build37)
Map Location 110,509,140 - 110,621,579
singlet/doubletdoublet
Overlap geneEG432502, LOC667904, Osbpl8
Upstream geneLOC100042502, LOC100042506, LOC100042510, LOC667855, 9230102K24Rik, LOC100042518, E2f7, Csrp2, Zdhhc17
Downstream geneBbs10, Nap1l1, EG382421, Phlda1, Krr1, Glipr1, EG639527, Glipr1l1, Glipr1l2, LOC627895, Glipr1l3, Caps2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195K23.bB6Ng01-195K23.g
ACCGA018034GA018035
length1,155219
definitionB6Ng01-195K23.b B6Ng01-195K23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,620,426 - 110,621,579)(110,509,140 - 110,509,358)
sequence
gaattcaagaccagtctgaacaaaatagagaattcaaagccagcttgggc
taaatgagacactatctaaaataacgtcccctgcctcaagtgacacacac
acaaatacaaccaccataagcttccgggaagttatttttttccagtttta
ggtcattgttatcttaaaagtagcagacccacctactggttaccctagga
aataagaaatggtgggtttgaatctggtttctgacacccactctgccccc
tacccctttctgacatcattttcaatttgccaagagttcgccccgttacg
tgttcacagctggactaagataatcactttctatatataatgcaatgaac
tgcctgccctttaaaaccctggagctcctcaatagcatttagagctgtta
gggaacttcagctcagctctcaacaccagacattttacagatgaaggatc
caagcacagagtgcccaagccagtgggcaggaggccaggtcctaagactc
tttagtacccagctaatgctttaaaacaaaactcaatgtgaggacttact
aacaaaactgagtagtggggaaactggaaacctaacactgtaacacagct
ctagttctgcttctaaaatatcccacaatacaaacatgtacatgcatttg
ctgtgttcacagaaaaccagggaaagaggacgagcacttggcgctctcaa
caccatgtcagacagtctggcggcctaagagccagtctccacagcttctg
ggtttatccttagtgcatgctggtacatgacaatcttgttccttggaaaa
aattagtaaaactcggtggtcatgttactatacacctctaatcccagcac
tcaagaggcataggtggatcctgtagcctggtacccagttccaaaaaata
aattaaattttaaataagtgcattatgcacgtgcacacatgtatagtaaa
actaaaaaatttgggttaaaatcagaaaaatatctaaagttcttattctt
ttcacccctcttcatcctttcctttctctccccccctctccctctcttta
tctttatccctcctctacttataaccagcacttgacactcagcttgctaa
attggtctttcatgttaaatgagtaacatttaaggcaagctaatttgcct
ttagt
aaaggcaggagagtctgaaagtccatcaaagccaaagtttaaaagaaaac
cctgcaagtctcagcagctgcctgtgcaagtgagagaagggagaagggaa
gcgggagggagtgtgtaccaagtcaactaagcaggcctggtggtcagtca
tctgggggtgtgtactacatcaattaagctggcatcgcagtcggcagggg
ggaggggggcggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_110620426_110621579
seq2: B6Ng01-195K23.b_45_1199 (reverse)

seq1  ACTAAAG--CAATTAGCCTGCCT--AATGTTACCTCATTTAACATG-AAG  45
      |||||||   ||||||| |||||  ||||||| ||||||||||||| |||
seq2  ACTAAAGGCAAATTAGCTTGCCTTAAATGTTA-CTCATTTAACATGAAAG  49

seq1  ACCAATTAAGGCCAGCTGAGTGTC-AGTGCTGGTTATAAGGTAGGAGGAG  94
      ||||||| | || ||||||||||| |||||||||||||| ||| ||||||
seq2  ACCAATTTA-GCAAGCTGAGTGTCAAGTGCTGGTTATAA-GTA-GAGGAG  96

seq1  GGATAAAGATAAAGAGGAGGGAGAGGGGGGGAGAGGAAAGGAAGGATGAA  144
      ||||||||||||||| ||||||||||||||||||| || | |||||||||
seq2  GGATAAAGATAAAGA-GAGGGAGAGGGGGGGAGAGAAAGGAAAGGATGAA  145

seq1  GAGGGGTGAAAAGAATAAGAACTTTAGATA-TTTTCTGATTTTAACCCAA  193
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAGGGGTGAAAAGAATAAGAACTTTAGATATTTTTCTGATTTTAACCCAA  195

seq1  ATTTTTTAGTTTTACTATACATGTGTGCACGTGCATAATGCACTTATTTA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAGTTTTACTATACATGTGTGCACGTGCATAATGCACTTATTTA  245

seq1  AAATTTAATTTATTTTTTTGGAACTGGGTACCAGGCTACAGGATCCACCT  293
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAATTTAATTTA-TTTTTTGGAACTGGGTACCAGGCTACAGGATCCACCT  294

seq1  ATGCCTCCTGAGTGCTGGGATTAGAGGTGTATAGTAACATGACCACCGAG  343
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCTTGAGTGCTGGGATTAGAGGTGTATAGTAACATGACCACCGAG  344

seq1  TTTTACTAATTTTTTCCAAGGAACAAGATTGTCATGTACCAGCATGCACT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTAATTTTTTCCAAGGAACAAGATTGTCATGTACCAGCATGCACT  394

seq1  AAGGATAAACCCAGAAGCTGTGGAGACTGGCTCTTAGGCCGCCAGACTGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATAAACCCAGAAGCTGTGGAGACTGGCTCTTAGGCCGCCAGACTGT  444

seq1  CTGACATGGTGTTGAGAGCGCCAAGTGCTCGTCCTCTTTCCCTGGTTTTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATGGTGTTGAGAGCGCCAAGTGCTCGTCCTCTTTCCCTGGTTTTC  494

seq1  TGTGAACACAGCAAATGCATGTACATGTTTGTATTGTGGGATATTTTAGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACACAGCAAATGCATGTACATGTTTGTATTGTGGGATATTTTAGA  544

seq1  AGCAGAACTAGAGCTGTGTTACAGTGTTAGGTTTCCAGTTTCCCCACTAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAACTAGAGCTGTGTTACAGTGTTAGGTTTCCAGTTTCCCCACTAC  594

seq1  TCAGTTTTGTTAGTAAGTCCTCACATTGAGTTTTGTTTTAAAGCATTAGC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTGTTAGTAAGTCCTCACATTGAGTTTTGTTTTAAAGCATTAGC  644

seq1  TGGGTACTAAAGAGTCTTAGGACCTGGCCTCCTGCCCACTGGCTTGGGCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACTAAAGAGTCTTAGGACCTGGCCTCCTGCCCACTGGCTTGGGCA  694

seq1  CTCTGTGCTTGGATCCTTCATCTGTAAAATGTCTGGTGTTGAGAGCTGAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGCTTGGATCCTTCATCTGTAAAATGTCTGGTGTTGAGAGCTGAG  744

seq1  CTGAAGTTCCCTAACAGCTCTAAATGCTATTGAGGAGCTCCAGGGTTTTA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTCCCTAACAGCTCTAAATGCTATTGAGGAGCTCCAGGGTTTTA  794

seq1  AAGGGCAGGCAGTTCATTGCATTATATATAGAAAGTGATTATCTTAGTCC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAGGCAGTTCATTGCATTATATATAGAAAGTGATTATCTTAGTCC  844

seq1  AGCTGTGAACACGTAACGGGGCGAACTCTTGGCAAATTGAAAATGATGTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGAACACGTAACGGGGCGAACTCTTGGCAAATTGAAAATGATGTC  894

seq1  AGAAAGGGGTAGGGGGCAGAGTGGGTGTCAGAAACCAGATTCAAACCCAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGGGTAGGGGGCAGAGTGGGTGTCAGAAACCAGATTCAAACCCAC  944

seq1  CATTTCTTATTTCCTAGGGTAACCAGTAGGTGGGTCTGCTACTTTTAAGA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTATTTCCTAGGGTAACCAGTAGGTGGGTCTGCTACTTTTAAGA  994

seq1  TAACAATGACCTAAAACTGGAAAAAAATAACTTCCCGGAAGCTTATGGTG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATGACCTAAAACTGGAAAAAAATAACTTCCCGGAAGCTTATGGTG  1044

seq1  GTTGTATTTGTGTGTGTGTCACTTGAGGCAGGGGACGTTATTTTAGATAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTATTTGTGTGTGTGTCACTTGAGGCAGGGGACGTTATTTTAGATAG  1094

seq1  TGTCTCATTTAGCCCAAGCTGGCTTTGAATTCTCTATTTTGTTCAGACTG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATTTAGCCCAAGCTGGCTTTGAATTCTCTATTTTGTTCAGACTG  1144

seq1  GTCTTGAATTC  1154
      |||||||||||
seq2  GTCTTGAATTC  1155

seq1: chr10_110509140_110509358
seq2: B6Ng01-195K23.g_72_290

seq1  AAAGGCAGGAGAGTCTGAAAGTCCATCAAAGCCAAAGTTTAAAAGAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGGAGAGTCTGAAAGTCCATCAAAGCCAAAGTTTAAAAGAAAAC  50

seq1  CCTGCAAGTCTCAGCAGCTGCCTGTGCAAGTGAGAGAAGGGAGAAGGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAAGTCTCAGCAGCTGCCTGTGCAAGTGAGAGAAGGGAGAAGGGAA  100

seq1  GCGGGAGGGAGTGTGTACCAAGTCAACTAAGCAGGCCTGGTGGTCAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGAGGGAGTGTGTACCAAGTCAACTAAGCAGGCCTGGTGGTCAGTCA  150

seq1  TCTGGGGGTGTGTACTACATCAATTAAGCTGGCATCGCAGTCGGCAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGGTGTGTACTACATCAATTAAGCTGGCATCGCAGTCGGCAGGGG  200

seq1  GGAGGGGGGCGTAGGGAGG  219
      ||||||||||| |||||||
seq2  GGAGGGGGGCGGAGGGAGG  219