BAC Information

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BAC

Clone NameB6Ng01-196G10
Chromosome10 (Build37)
Map Location 123,943,835 - 123,944,971
singlet/doubletsinglet
Overlap gene4930503E24Rik
Upstream geneAI851790
Downstream geneLOC671416, Slc16a7, LOC100042987, EG668313, LOC100042992
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196G10.bB6Ng01-196G10.g
ACCGA018555GA018556
length1,144654
definitionB6Ng01-196G10.b B6Ng01-196G10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcataaaatcagtcatagaaggggtttggttttggtaatctct
tctctccttctttcctgacattaaattttggctcatctgcttgtcttcct
tcaccctcctcatatcatggcactaaattttatttttgaatacctttaat
tttattaatcaaatttgaataaaagtatataatacaggtagccttagacg
acaaaaggacagcaatgctaatccataatcatagaatacaatttatgaga
gagagaataatattcatgcctttactatagcaaattatcttaactgtgtg
attttgcatgctcagttcaaacaagataatctgcaaaaaaggaaagaggg
cttaatgtatttcctaccaagggactgatggggctcatttgtgaaagctg
ccttccaggactaggcagactgtgtgaaaaatacaaacaaaaaaggaaaa
gatggctaggcagagagaggccacagaactaaaattcatggaagcaggtg
tgactgttgagccagcaggtggagagagaaggtaatctgaaggacaaagc
aaaacacgggcatcaaaacacctgcggatcagaagccagatacaatttgt
gtgagcatcagagctaacttagccagttctaccttatcctgttaactgag
tccctgctctttcactgaatgaggaatattctcaggagtgctgtgtggca
tcctgctgtgattgctgaattctattagaaggtcaagtcctgaaagattc
cttgtgataaggagaattagttgtatagacaagtcccgatcagcatttat
cactgcataaatattgactaggcacagtttctagattctttggttaaata
cagcattgtagaaatatttttcaaatacttttaaccaggaagcagaaaaa
acctaatgaagtagacgttcaggatatctgaagatattccaggaatatgc
catacctttttcatttagtagtgaatactaaccaatactctgtcattaat
taccaatggtcaatggcttcattattacagctatatatttctataataat
tttgagcaaaagttcatagaaataattcccttggtattttaatgtttata
ttaatgcctttaaaaccaggatacaacataccacaacacacgca

gaattcttccaaaccatgacactattgctgatgtcaaaatgtgcttgcag
gcaggagcctggtatggctgcctctgagaggccctaccagcagctgactg
acacaaatgcagattcttacagccactggactgagctggggtgggggcct
tatggaagagttagggaagaactgaagggaagttcaagcccataggagac
aacataatatcagttaaccaggcccctgatatctcccagggactaagcca
ccaaccaaaaagcagacatgggctggtacactacacatgtagcagaggac
tgccttgtctggcctcagtgagaggggatgagctttgtcctatggaggcc
tgatgtcctagagaaggaggatactagaggggtgaggtgagagtcagtgg
gtgggtgggtgagcatccttttagaggtaaaggagaggaatgatgggtta
gggggctcatggaagtagaactgggaagggggacaatgtttgattgttaa
taagtaaaataattaataaaacataaaataaacacaaaatgtgttcttca
aaaattaaaggggcaaaattttttaaaaattatagaatgtattatgcaag
taaatattatgtttttttgagggtaaatattaataaactaaatggaatta
tgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123943835_123944971
seq2: B6Ng01-196G10.b_48_1191 (reverse)

seq1  TGCGTGTGTGTGT-GTGTG-TGTATCTGTGTTTTAAA-GCATTATTATTA  47
      ||||||||| ||| || || ||||||   |||||||| |||||| || ||
seq2  TGCGTGTGT-TGTGGTATGTTGTATCCTGGTTTTAAAGGCATTAATA-TA  48

seq1  AACATT-AAATAC--AAGGAATTATTTCTATGAACTTTTGCTCAAAA-TA  93
      |||||| ||||||  | |||||||||||||||||||||||||||||| ||
seq2  AACATTAAAATACCAAGGGAATTATTTCTATGAACTTTTGCTCAAAATTA  98

seq1  TTATAGAA--ATATAGCTGT-ATAATGAAGCCCATTTGACCATTGGTAAT  140
      ||||||||  |||||||||| |||||||||||   |||||||||||||||
seq2  TTATAGAAATATATAGCTGTAATAATGAAGCC--ATTGACCATTGGTAAT  146

seq1  TAAATGACAGAGTATTGGTTAGTATTCACTACTAAATGAAAAA-GTATGG  189
      | ||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  T-AATGACAGAGTATTGGTTAGTATTCACTACTAAATGAAAAAGGTATGG  195

seq1  CATATTCCTGGAATATCTTCAGATATCCTGAACGTCTACTTCATTAGGTT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCCTGGAATATCTTCAGATATCCTGAACGTCTACTTCATTAGGTT  245

seq1  TTTTCTGCTTCCTGGTTAAAAGTATTTG-AAAATATTTCTACAATGCTGT  288
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTCTGCTTCCTGGTTAAAAGTATTTGAAAAATATTTCTACAATGCTGT  295

seq1  ATTTAACCAAAGAATCTAGAAACTGTGCCTAGTCAATATTTATGCAGTGA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACCAAAGAATCTAGAAACTGTGCCTAGTCAATATTTATGCAGTGA  345

seq1  TAAATGCTGATCGGGACTTGTCTATACAACTAATTCTCCTTATCACAAGG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCTGATCGGGACTTGTCTATACAACTAATTCTCCTTATCACAAGG  395

seq1  AATCTTTCAGGACTTGACCTTCTAATAGAATTCAGCAATCACAGCAGGAT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTCAGGACTTGACCTTCTAATAGAATTCAGCAATCACAGCAGGAT  445

seq1  GCCACACAGCACTCCTGAGAATATTCCTCATTCAGTGAAAGAGCAGGGAC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACAGCACTCCTGAGAATATTCCTCATTCAGTGAAAGAGCAGGGAC  495

seq1  TCAGTTAACAGGATAAGGTAGAACTGGCTAAGTTAGCTCTGATGCTCACA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAACAGGATAAGGTAGAACTGGCTAAGTTAGCTCTGATGCTCACA  545

seq1  CAAATTGTATCTGGCTTCTGATCCGCAGGTGTTTTGATGCCCGTGTTTTG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGTATCTGGCTTCTGATCCGCAGGTGTTTTGATGCCCGTGTTTTG  595

seq1  CTTTGTCCTTCAGATTACCTTCTCTCTCCACCTGCTGGCTCAACAGTCAC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCCTTCAGATTACCTTCTCTCTCCACCTGCTGGCTCAACAGTCAC  645

seq1  ACCTGCTTCCATGAATTTTAGTTCTGTGGCCTCTCTCTGCCTAGCCATCT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCTTCCATGAATTTTAGTTCTGTGGCCTCTCTCTGCCTAGCCATCT  695

seq1  TTTCCTTTTTTGTTTGTATTTTTCACACAGTCTGCCTAGTCCTGGAAGGC  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTTTGTTTGTATTTTTCACACAGTCTGCCTAGTCCTGGAAGGC  745

seq1  AGCTTTCACAAATGAGCCCCATCAGTCCCTTGGTAGGAAATACATTAAGC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCACAAATGAGCCCCATCAGTCCCTTGGTAGGAAATACATTAAGC  795

seq1  CCTCTTTCCTTTTTTGCAGATTATCTTGTTTGAACTGAGCATGCAAAATC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTCCTTTTTTGCAGATTATCTTGTTTGAACTGAGCATGCAAAATC  845

seq1  ACACAGTTAAGATAATTTGCTATAGTAAAGGCATGAATATTATTCTCTCT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTTAAGATAATTTGCTATAGTAAAGGCATGAATATTATTCTCTCT  895

seq1  CTCATAAATTGTATTCTATGATTATGGATTAGCATTGCTGTCCTTTTGTC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAATTGTATTCTATGATTATGGATTAGCATTGCTGTCCTTTTGTC  945

seq1  GTCTAAGGCTACCTGTATTATATACTTTTATTCAAATTTGATTAATAAAA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAGGCTACCTGTATTATATACTTTTATTCAAATTTGATTAATAAAA  995

seq1  TTAAAGGTATTCAAAAATAAAATTTAGTGCCATGATATGAGGAGGGTGAA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGTATTCAAAAATAAAATTTAGTGCCATGATATGAGGAGGGTGAA  1045

seq1  GGAAGACAAGCAGATGAGCCAAAATTTAATGTCAGGAAAGAAGGAGAGAA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACAAGCAGATGAGCCAAAATTTAATGTCAGGAAAGAAGGAGAGAA  1095

seq1  GAGATTACCAAAACCAAACCCCTTCTATGACTGATTTTATGCTGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTACCAAAACCAAACCCCTTCTATGACTGATTTTATGCTGAATTC  1144


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