BAC Information

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BAC

Clone NameB6Ng01-196J04
Chromosome10 (Build37)13 (Build37)
Map Location 128,980,236 - 128,980,78834,207,410 - 34,208,432
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518, Olfr776, Olfr777, Olfr778-ps1, LOC544749, Olfr780, Olfr781, Olfr782, Olfr783-ps1, Olfr784, EG546488, Olfr786, Olfr787, Olfr788, Olfr789-ps1, Olfr790, Olfr791, Olfr792
Downstream geneGA_x5J8B7W6HFP-3168293-3169194, Olfr794, GA_x5J8B7W6HFP-3198834-3199739, Olfr796, GA_x5J8B7W6HFP-3231749-3230798, Olfr798, Olfr799, Olfr800, Smt3h2-ps3, Olfr801, Olfr802, Olfr803, Olfr804, Olfr805, Olfr806, Olfr807, Olfr808, Olfr809, Olfr810, Olfr811, Olfr812, Olfr813, Olfr814, Olfr815, Olfr816, Olfr1544-ps1, Olfr817-ps1, Olfr818, LOC100043200, Olfr247, LOC100043203, Olfr820, Olfr821, Olfr822, Olfr1542-ps1, Olfr823, LOC382471, Olfr824, LOC672405, Olfr825, Olfr826, Olfr827, Neurod4, 5830405N20Rik, EG625068, LOC100043719, EG623734, EG625109, EG625131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196J04.bB6Ng01-196J04.g
ACCGA018678GA018679
length9661,032
definitionB6Ng01-196J04.b B6Ng01-196J04.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(128,980,236 - 128,980,788)(34,207,410 - 34,208,432)
sequence
gaattcccagaaggagataaagagtgaggccttgaacacgagagagagaa
aaagagaataggtttcagaaatggagttgtcccctgtccaggacgcttta
gcacaagagaaggaaaatagatataagatatttcagagctctcctaggga
caggaagaaattggtcctgcttcctctctggctcctgttggagatatact
tagttctggttaggatatctgggtccctttgaaacatcaagttctattcc
ctctctgtctatcgtctgtgcaccatttatccatatgtctgtctacttat
gtttgtttttgttttgttgtttgaatgattgttgttctgtgtttcatgtt
ggaaaaaaaaggttaaaactttatctgctggctgtccatcctttgattta
atttaacttgtttaaaaggcagtctcaatttgcatagcagaaactgataa
gctacactgcactgttcctgggagtcaagcacagctggaaaagccctact
agaggctgattatctacacaagtcactcttaaagggaccaacagcttttt
gcttgtaacagaaagtcagcttaaaattggcaactcagggttggagtcat
tctaaatgacacttggcatgaaccaacccaggaaaacagatctttaaaga
tacttctaaattgggataatattttatgtaattcttatcctagaaactag
acttatagaggatagtatttaagacaatgtctctttaatatgtattaaaa
gttgcactgtcatgcattcatatataagaactggcagcccaaactttgta
cgtgaaagtaatgctcttggtattgactttaaagagaatggtggtttaaa
acaaggttttgttttacaaaattatgggcatgctctaatatacaaagaaa
atttaaaatatagttaaactgcccatgtccattagctacagtttacattc
aatcacagatcagatg
gaattcttttgctgaaagagggagctggcaaagaattttttgcattcttg
acctgtggcattgacccccaactgttccccatcccactctttagatggca
ctcacataaccgtgcttccttgtctggataaaggctaaggggctgatgtg
tgtgctacatggagaaaggcaggctgtgttctgcccagccttctctaagc
aggctttttaggtggaactttgcaacagagcaccaacatatgggtgtggt
tgtgtttatttgaaagctattttattttgactgtcaaatactgtattcaa
tctattcaatcattcaagggttctgttgttggaaagttcaaaagcataga
agacatggctatctttaggacttacaggcttttcttaatatataccacac
cactgcccaaggctctgaaacaagtctcagatcagaaggcagatgagaga
aaggtgagagttgaaagcctttccctacatcagttgtagagggagctatg
caaatggtaaacacaacttggaagtagtgactaacagaggaagaggtgga
tggagaaagggttgccaggttacaagtgcccatgctcactcacccttctg
gatttactgcagtcctggccagcttctacaacatatacccaggccttggc
aactgccatgagaccacactgctcctggccctgactcctcactcaggtgg
ggtgagtccctttgcaagccagtcccagaagataaaactaggaaactttc
tcaaataagctggacaagataaagctagtctcaatggcgtcccagcccac
aaggtttcttcctgccaatccaaatctcttagatggtcagcacaattatg
cccagttcccacagtttccctacccacctcctctcacaaccattaatgga
tttctggggaaaggtggtagctgaacctaggctatctgattgcattgagc
ctaggatggccccagttctagctctttcctttcttttacccctaggcaca
gtctaaggtatacttttggcctcttgtgcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_128980236_128980788
seq2: B6Ng01-196J04.b_44_579 (reverse)

seq1  CCCTTTAAGAGATGCTTGTGTAGATAATCAGCCTCTAGCAGGGATTTTCC  50
      |||||||||||   |||||||||||||||||||||||| |||| ||||||
seq2  CCCTTTAAGAGTGACTTGTGTAGATAATCAGCCTCTAGTAGGGCTTTTCC  50

seq1  AGCTGTACTTGACTCCCAGCCACAGTGCAGTGTAACTTATCAGTTTCTGC  100
      |||||| ||||||||||||  ||||||||||||| |||||||||||||||
seq2  AGCTGTGCTTGACTCCCAGGAACAGTGCAGTGTAGCTTATCAGTTTCTGC  100

seq1  TGTACAAATTGAGACTGCCTTTTAAACAAGTTAAGCTAAATCAAAGTATG  150
      | | ||||||||||||||||||||||||||||||  |||||||||| |||
seq2  TATGCAAATTGAGACTGCCTTTTAAACAAGTTAAATTAAATCAAAGGATG  150

seq1  GACAGCCAGCAGATAAAGTTTTAACCATTTTTTTTCAACATGAAACACAG  200
      |||||||||||||||||||||||||| ||||||| |||||||||||||||
seq2  GACAGCCAGCAGATAAAGTTTTAACCTTTTTTTTCCAACATGAAACACAG  200

seq1  AACAATAATCATTCAAACAACAAAACAAAAACAAACATAAATTGATAAAC  250
      ||||| |||||||||||||||||||||||||||||||||| | || | ||
seq2  AACAACAATCATTCAAACAACAAAACAAAAACAAACATAAGTAGACAGAC  250

seq1  ATATGGACAAATTGGTACACCAAGGACAGACAATAGACAGAGAAAGAATA  300
      ||||||| ||| ||||       | |||||| |||||||||||  |||||
seq2  ATATGGATAAA-TGGT-------GCACAGACGATAGACAGAGAGGGAATA  292

seq1  GAACTTGATATTTCAAAGGGACCCAGATATCCTAACCAAAACTAAGAATA  350
      ||||||||| |||||||||||||||||||||||||||| ||||||| |||
seq2  GAACTTGATGTTTCAAAGGGACCCAGATATCCTAACCAGAACTAAGTATA  342

seq1  TCTTC-ATAGGAGCCAGAGAGGGAGCAGGATGTCTCCCGATTTCCTCCTG  399
      ||| | | |||||||||||||| |||||||      || ||||| |||||
seq2  TCTCCAACAGGAGCCAGAGAGGAAGCAGGA------CCAATTTCTTCCTG  386

seq1  TCCTTAGGAGAGCTTTGGAATAGCTTATTTCCATTTTCCCTCTCTTTTGC  449
      ||| |||||||||| || |||| ||||| || ||||||| |||||| |||
seq2  TCCCTAGGAGAGCTCTGAAATATCTTATATCTATTTTCCTTCTCTTGTGC  436

seq1  TAAAAGGTCCCGAACTGTGGATAACTGC-TTTCTGAAACCTATTCTCTCT  498
      ||||  |||| | || | ||| |||| | ||||||||||||||  |||||
seq2  TAAAGCGTCCTGGACAGGGGACAACTCCATTTCTGAAACCTAT--TCTCT  484

seq1  CTTTCTCTCTCTCATGTTGAAAGTCTAACTCTTTATCTCCTTCTTCTGGG  548
       |||||||||||| |||| || | || ||||||||||||   ||||||||
seq2  TTTTCTCTCTCTCGTGTTCAAGGCCTCACTCTTTATCTC---CTTCTGGG  531

seq1  AATTC  553
      |||||
seq2  AATTC  536

seq1: chr13_34207410_34208432
seq2: B6Ng01-196J04.g_68_1099 (reverse)

seq1  AAAGC-CAAGAG--CAAAAGTCTAACCTTGGACTGTGCCTAGGGGTAAAA  47
      ||||| ||||||  ||||||| | ||||| ||||||||||||||||||||
seq2  AAAGCACAAGAGGCCAAAAGTAT-ACCTTAGACTGTGCCTAGGGGTAAAA  49

seq1  GAAAGGAAAGAGCTAGAACCTGGGGCCATCCTAGGCTCACTGCAATCTGA  97
      |||||||||||||||||| |||||||||||||||||||| ||||||| ||
seq2  GAAAGGAAAGAGCTAGAA-CTGGGGCCATCCTAGGCTCAATGCAATCAGA  98

seq1  TAGCCTAGTTTCAACTACCACCCTTCCCCAGAAAT-CATTAATGGGTGGT  146
      |||||||| |||| |||||||| |||||||||||| ||||||| ||| ||
seq2  TAGCCTAGGTTCAGCTACCACCTTTCCCCAGAAATCCATTAAT-GGTTGT  147

seq1  GAGAGGAGGT-GGTAGGG-AACTGTGGGAACTGGGCAT-ATTGTGCTGA-  192
      |||||||||| ||||||| ||||||||||||||||||| |||||||||| 
seq2  GAGAGGAGGTGGGTAGGGAAACTGTGGGAACTGGGCATAATTGTGCTGAC  197

seq1  CATCTAAGAGATTTGGATTGGCAGGA--GAACCTTGT-GGCTGGGACGCC  239
      ||||||||||||||||||||||||||   |||||||| ||||||||||||
seq2  CATCTAAGAGATTTGGATTGGCAGGAAGAAACCTTGTGGGCTGGGACGCC  247

seq1  ATTGAGACTAGCTTTATCTTGTCCAGCTTATTTGAGAAAGTTT-CTAGTT  288
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTGAGACTAGCTTTATCTTGTCCAGCTTATTTGAGAAAGTTTCCTAGTT  297

seq1  TTATCTTCTGGGACTGGCTTGCAAAGGGACTCACCCCACCTGAGTGAGGA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTCTGGGACTGGCTTGCAAAGGGACTCACCCCACCTGAGTGAGGA  347

seq1  GTCAGGGCCAGGAGCAGTGTGGTCTCATGGCAGTTGCCAAGGCCTGGGTA  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGCCAGGAGCAGTGTGGTCTCATGGCAGTTGCCAAGGCCTGGGTA  397

seq1  TATGTTGTAGAAGCTGGCCAGGACTGCAGTAAATCCAGAAGGGTGAGTGA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGTAGAAGCTGGCCAGGACTGCAGTAAATCCAGAAGGGTGAGTGA  447

seq1  GCATGGGCACTTGTAACCTGGCAACCCTTTCTCCATCCACCTCTTCCTCT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGCACTTGTAACCTGGCAACCCTTTCTCCATCCACCTCTTCCTCT  497

seq1  GTTAGTCACTACTTCCAAGTTGTGTTTACCATTTGCATAGCTCCCTCTAC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTCACTACTTCCAAGTTGTGTTTACCATTTGCATAGCTCCCTCTAC  547

seq1  AACTGATGTAGGGAAAGGCTTTCAACTCTCACCTTTCTCTCATCTGCCTT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATGTAGGGAAAGGCTTTCAACTCTCACCTTTCTCTCATCTGCCTT  597

seq1  CTGATCTGAGACTTGTTTCAGAGCCTTGGGCAGTGGTGTGGTATATATTA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTGAGACTTGTTTCAGAGCCTTGGGCAGTGGTGTGGTATATATTA  647

seq1  AGAAAAGCCTGTAAGTCCTAAAGATAGCCATGTCTTCTATGCTTTTGAAC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGCCTGTAAGTCCTAAAGATAGCCATGTCTTCTATGCTTTTGAAC  697

seq1  TTTCCAACAACAGAACCCTTGAATGATTGAATAGATTGAATACAGTATTT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAACAACAGAACCCTTGAATGATTGAATAGATTGAATACAGTATTT  747

seq1  GACAGTCAAAATAAAATAGCTTTCAAATAAACACAACCACACCCATATGT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCAAAATAAAATAGCTTTCAAATAAACACAACCACACCCATATGT  797

seq1  TGGTGCTCTGTTGCAAAGTTCCACCTAAAAAGCCTGCTTAGAGAAGGCTG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTCTGTTGCAAAGTTCCACCTAAAAAGCCTGCTTAGAGAAGGCTG  847

seq1  GGCAGAACACAGCCTGCCTTTCTCCATGTAGCACACACATCAGCCCCTTA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAACACAGCCTGCCTTTCTCCATGTAGCACACACATCAGCCCCTTA  897

seq1  GCCTTTATCCAGACAAGGAAGCACGGTTATGTGAGTGCCATCTAAAGAGT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTATCCAGACAAGGAAGCACGGTTATGTGAGTGCCATCTAAAGAGT  947

seq1  GGGATGGGGAACAGTTGGGGGTCAATGCCACAGGTCAAGAATGCAAAAAA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGGGAACAGTTGGGGGTCAATGCCACAGGTCAAGAATGCAAAAAA  997

seq1  TTCTTTGCCAGCTCCCTCTTTCAGCAAAAGAATTC  1023
      |||||||||||||||||||||||||||||||||||
seq2  TTCTTTGCCAGCTCCCTCTTTCAGCAAAAGAATTC  1032