BAC Information

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BAC

Clone NameB6Ng01-196P05
Chromosome10 (Build37)
Map Location 24,028,236 - 24,029,362
singlet/doubletsinglet
Overlap genenone
Upstream geneEya4, Rps12, 1110021L09Rik, Vnn3, Vnn1, Taar1, Taar2, Taar3, Taar4, Taar5, Taar6, Taar7a, Taar7b, Taar7c-ps, Taar7d, Taar7e, LOC628480, Taar7f, Taar8a, Taar8b, Taar8c, Taar9, Stx7, Moxd1
Downstream geneLOC628537, Ctgf, Enpp1, Enpp3, Crsp3, Arg1, EG667479, LOC212399, Akap7, LOC665800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-196P05.bB6Ng01-196P05.g
ACCGA018952GA018953
length8831,110
definitionB6Ng01-196P05.b B6Ng01-196P05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactaaggaataccgaatggccgagaagcacctaaaaatgtt
taacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagattt
cgcctcacaccaatcagaatggctaagatcaaaaattcatgtgacagcag
atgctggcaaggatgtggagaaagagaaacattcctccattgctggtggg
attgttagcaggtacaaccactctggaaatcagtttgttggtttctcaga
aaagtggacatagtattatcaggagatccagcaatacctctcctgggaat
atacccagaagatgttccaacttgtaataaggacacatgttctactatgt
tcatagcagccttatttataataaccagaaagaaccccgatgtccctcaa
cagaggaatggatacagaaaatgtggtacatttacacaatggagtattac
tcagctattaaaaacaatgaattcttgaaattttcagacaaatagatgca
tctggaggatatcatcctaagtgaggtaacccaataacaaaagaacacac
atgatatatactcactgataagtggatattagcccagaagctcagaatac
ccaagatacaatttgcaaaacacatgaaactcaagaagaagaaagaccaa
agtgtgcatactttgatccttcttagaaaggggacaaaatacccatggaa
tgagttacagagacaaacttcagagcagagactgaaggcatgaccattca
atgactgtcccacctggggatccatctcataaacaaccaccacacctaga
cattattgtggatgtcaacaaagcttgctgacaggagcctaatatagctg
tttcctgaagagtctctgccagtgcctgacaaa
gaattctgttggtgatgttcgcatctgtagtttttttctctttcctaggt
tttccatcttcaggattgctttggtttctgttttctttattgcttctatt
acccttttcaggtcttggacaattttattcatgtcctttatctgtttgat
tgtattttcctatatttctttataattatttgttcttcttttaatgcctc
tacccattggaatgtatttttcatgtatttgaatgtctttcgtgtatcta
ttcatttcctcttttaaggcttctatcatctttatagggttggatttaag
atcctcttcttgtgcttcagttttattaggatagccagggtttgctgaag
caggatagctgggtattgtcctaggtcttgttgattgagttcttatgcta
tccttcaggcatctgggtttccctgatatttgctggatgatcctgatggc
agcagtacttcttgggaagatgggggaaaccgtggaccagacaatgaggt
cagggtacccaacttggctggctgtgcctcaggctgatcttactgccaag
ggattggtggggcaacattccaagctgatagttcttggggtctccacagg
cctccatggggaatcaggacactcttgaggtcttacaaggctcctcagaa
ccagagagtaagcccagagccggataatggagttcagggagttcagggga
tctcatgaaactcacctctccaggctgtgtcctgggtggccctaactggg
atgggattagtagagcaggaatccaagctgcttagtcctgggctctcgaa
gacgtccaccttcttcacattttttacatcaacctatttatctatttaca
gagagtaaattatttaagtgtgatcaaagaataacaatcatggaaccagg
atgaaggtgcaagcattcgttggattattccccggcaattattttgtctg
gagtatttcaaactgagaggtacaaatgctaatagagacaaacagcaatg
tgacctgatcagtccatgcatgaagaggcctgcctatgtaatgtccccac
atttgttgatgacaagaagtgctgtacagtttggcttacaggacttcctg
ctgatcatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_24028236_24029362
seq2: B6Ng01-196P05.g_66_1175

seq1  GAATTCTGTTGGTGATGTTCGCATCTGTAGTTTTTTTCTCTTTCCTAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGGTGATGTTCGCATCTGTAGTTTTTTTCTCTTTCCTAGGT  50

seq1  TTTCCATCTTCAGGATTGCTTTGGTTTCTGTTTTCTTTATTGCTTCTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCTTCAGGATTGCTTTGGTTTCTGTTTTCTTTATTGCTTCTATT  100

seq1  ACCCTTTTCAGGTCTTGGACAATTTTATTCATGTCCTTTATCTGTTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTTCAGGTCTTGGACAATTTTATTCATGTCCTTTATCTGTTTGAT  150

seq1  TGTATTTTCCTATATTTCTTTATAATTATTTGTTCTTCTTTTAATGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTCCTATATTTCTTTATAATTATTTGTTCTTCTTTTAATGCCTC  200

seq1  TACCCATTGGAATGTATTTTTCATGTATTTGAATGTCTTTCGTGTATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCATTGGAATGTATTTTTCATGTATTTGAATGTCTTTCGTGTATCTA  250

seq1  TTCATTTCCTCTTTTAAGGCTTCTATCATCTTTATAGGGTTGGATTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCCTCTTTTAAGGCTTCTATCATCTTTATAGGGTTGGATTTAAG  300

seq1  ATCCTCTTCTTGTGCTTCAGTTTTATTAGGATAGCCAGGGTTTGCTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTTCTTGTGCTTCAGTTTTATTAGGATAGCCAGGGTTTGCTGAAG  350

seq1  CAGGATAGCTGGGTATTGTCCTAGGTCTTGTTGATTGAGTTCTTATGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATAGCTGGGTATTGTCCTAGGTCTTGTTGATTGAGTTCTTATGCTA  400

seq1  TCCTTCAGGCATCTGGGTTTCCCTGATATTTGCTGGATGATCCTGATGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCAGGCATCTGGGTTTCCCTGATATTTGCTGGATGATCCTGATGGC  450

seq1  AGCAGTACTTCTTGGGAAGATGGGGGAAACCGTGGACCAGACAATGAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTACTTCTTGGGAAGATGGGGGAAACCGTGGACCAGACAATGAGGT  500

seq1  CAGGGTACCCAACTTGGCTGGCTGTGCCTCAGGCTGATCTTACTGCCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTACCCAACTTGGCTGGCTGTGCCTCAGGCTGATCTTACTGCCAAG  550

seq1  GGATTGGTGGGGCAACATTCCAAGCTGATAGTTCTTGGGGTCTCCACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGTGGGGCAACATTCCAAGCTGATAGTTCTTGGGGTCTCCACAGG  600

seq1  CCTCCATGGGGAATCAGGACACTCTTGAGGTCTTACAAGGCTCCTCAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATGGGGAATCAGGACACTCTTGAGGTCTTACAAGGCTCCTCAGAA  650

seq1  CCAGAGAGTAAGCCCAGAGCCGGATAATGGAGTTCAGGGAGTTCAGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAGTAAGCCCAGAGCCGGATAATGGAGTTCAGGGAGTTCAGGGGA  700

seq1  TCTCATGAAACTCACCTCTCCAGGCTGTGTCCTGGGTGGCCCTAACTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGAAACTCACCTCTCCAGGCTGTGTCCTGGGTGGCCCTAACTGGG  750

seq1  ATGGGATTAGTAGAGCAGGAATCCAAGCTGCTTAGTCCTGGGCTCTCGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATTAGTAGAGCAGGAATCCAAGCTGCTTAGTCCTGGGCTCTCGAA  800

seq1  GACGTCCACCTTCTTCACATTTTTTACATCAACCTATTTATCTATTTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTCCACCTTCTTCACATTTTTTACATCAACCTATTTATCTATTTACA  850

seq1  GAGAGTAAATTATTTAAGTGTGATCAAAGAATAACAATCATGGAACCAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTAAATTATTTAAGTGTGATCAAAGAATAACAATCATGGAACCAGG  900

seq1  ATGAAGGGTGCAAGCATTCGTTGGATTATTCCCC-GCAATTATTTTGTCT  949
      ||||| |||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGAA-GGTGCAAGCATTCGTTGGATTATTCCCCGGCAATTATTTTGTCT  949

seq1  GGAAGTATTTCAAAATGAGAGGTTACAAATGCTAAATAGAGAACAAAACA  999
      || ||||||||||| ||||||| |||||||||| ||||||||   |||||
seq2  GG-AGTATTTCAAACTGAGAGG-TACAAATGCT-AATAGAGA--CAAACA  994

seq1  GCCAATGTTGACCTGATCCAAGGCCCATGCAGTGAAGAGGGCCCTGCCCT  1049
      | ||||| ||||||||||    | ||||||| ||||||||  |||| |||
seq2  G-CAATG-TGACCTGATC---AGTCCATGCA-TGAAGAGG--CCTG-CCT  1035

seq1  ATGTAGTGTCCCCACATTTGTGGATGACAAAGAAAGTGGCTGTACAGTTT  1099
      ||||| ||||||||||||||| ||||||||   |||| ||||||||||||
seq2  ATGTAATGTCCCCACATTTGTTGATGACAA--GAAGT-GCTGTACAGTTT  1082

seq1  GCTTAACAGGACTCACTGCTGATCATGA  1127
      |  | ||||||||  |||||||||||||
seq2  GGCTTACAGGACTTCCTGCTGATCATGA  1110