BAC Information

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BAC

Clone NameB6Ng01-198E23
Chromosome10 (Build37)
Map Location 45,303,367 - 45,304,496
singlet/doubletsinglet
Overlap geneHace1
Upstream geneLOC546476, 4930431F10Rik, LOC629573, LOC100041529, EG215974, Prep, Popdc3, Bves, Lin28b, Dbil5-ps, LOC100042364
Downstream geneLOC664781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198E23.bB6Ng01-198E23.g
ACCGA019939GA019940
length1,2151,138
definitionB6Ng01-198E23.b B6Ng01-198E23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgctaatgacacacatgtataggtacatcttgcatttcatag
ttgtgctgcatttgtcaggactccataggaagaaatacatcaaaaaacta
gtgatgggcctcagcttcttgtcacttcagcagactatggagacccgtgg
aggacacgtgatgtttagggagagtataaaaaggactcaatcgatagtga
caggaacagagctaggcttgcttatagagctagttgtgcaacacttggtc
tcctgtctttgctgatctttactttgctgagagaggcagagctgagaact
ttcttggcattcctggtggccctggttcctcctgctgactggtgctgagg
ctgaggcctggctgtctctactaggtagtgccaccactgctgattcatgt
ttgctctcctgattctactgaactggatgctggtatacccatgaagtgtt
tgtgagtagatcaagctgccactgccgacctgtgaactgaactgctgatt
tccagacaacacagatgagagttgctccgaaggaccatttttaaataggt
ccacttcccccatgtcctttcttcgctactacctggtgggtggtgggcta
gaagggaggttaaaacatctgagaaccatcattaaaagtagacttgaaaa
aattaaagttacagatttttctattcctaacttctttaggacttttgtca
tgaacagatactgaactttgtcaaagtccacttttgttacttatatttat
ttattgacattttaaaataatttggtaccctcaaggaaaacattttggtc
tggtgatcttttgaatgagttttaaaactcaatttgcaagtgttttattt
agaatattatatctgtatccatcaggaaactgatctgtaattttctttgt
tgctatggttgctgttgttatgatgatgtccttatctggtttatgtagaa
agatatactggctttagagaatggatttggtagtgttcctctattttatg
gacagtttgaggatatggtgtgacctttcatcttgtccagtcacagactc
aactctgccattagcaattgagagttacactgtactgaatttctctgatc
ttctcttttggctttccagattgaacactctgggggagtacctggctagt
caactgtgattccaccgtatagggctgccgaaatcccctgtagagctcct
ctctgtagatctact

gaattcacagccagcctggtctacctagagagttccaggatagccagggc
tgttacacagagaaaccctattacaaacaaacaaaaaacaaagcaaaaca
aaacaagaaaacaaacaaaaagacttaatatctccaaaaacttctagaaa
tagtttgaactctgttgcacaaccatgtgaatattgtcactagtaatgaa
tggcttacttgaaaatggctaatggtatgtgtgtttgtttttatcacagt
gagaaaaatatgtatcgtaaacaaaagtcatttttggctgttttaggctt
atagaaaatccagctttcagcatctggtactaccgtagtacagttatcaa
atctaagaaattaacatgtgcacaatatcactgtgaactacactgcagag
tcgatgagcgttctagctttcccactgtcatctgctttagcatgtactac
aggatactcatcacatttagttgggttctttagtctccctagtgcgtctt
ctgatcactgtaagggggactgctcatacattttgtggtctcgcttggtt
ttgtcaggtgtcttctgatgatccgagtgaggtcacacattttggggagt
atggccttttctgtggattgtaggagttatttctaatgatattacctatt
atctgcccattaaagtgctaggtgctggggtagttactgtaaatttattc
tttttccattgtagtttttaggagatactttggtataagcctcagtgtta
taaggctaagtaaaatctctaaaataacacgatactgttagtaatgtaaa
aaaaagaaataagttcaaaacacaagctgaaacacaacataaacgcaatg
tggcatctcagatactgcctgtgtgtgtgtgtgtgtgggtgtatctgcac
agaggccactgttttccatcctgtttctgtgagaataagagtctcccatt
gggactggaatgggtaggcggcaagccttgggcagctggtctaacatgtc
taatagtggcaggatccgcggtgccacgtctatgggtgtcggctcaaagc
tcagatcccctgccttggtgttggcagctgctctcgtatgcccacagaga
ccttctcctgccggaacatgctgagtggcctttaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_45303367_45304496
seq2: B6Ng01-198E23.g_69_1206

seq1  GAATTCACAGCCAGCCTGGTCTACCTAGAGAGTTCCAGGATAGCCAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCCAGCCTGGTCTACCTAGAGAGTTCCAGGATAGCCAGGGC  50

seq1  TGTTACACAGAGAAACCCTATTACAAACAAACAAAAAACAAAGCAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACACAGAGAAACCCTATTACAAACAAACAAAAAACAAAGCAAAACA  100

seq1  AAACAAGAAAACAAACAAAAAGACTTAATATCTCCAAAAACTTCTAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGAAAACAAACAAAAAGACTTAATATCTCCAAAAACTTCTAGAAA  150

seq1  TAGTTTGAACTCTGTTGCACAACCATGTGAATATTGTCACTAGTAATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGAACTCTGTTGCACAACCATGTGAATATTGTCACTAGTAATGAA  200

seq1  TGGCTTACTTGAAAATGGCTAATGGTATGTGTGTTTGTTTTTATCACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTACTTGAAAATGGCTAATGGTATGTGTGTTTGTTTTTATCACAGT  250

seq1  GAGAAAAATATGTATCGTAAACAAAAGTCATTTTTGGCTGTTTTAGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAATATGTATCGTAAACAAAAGTCATTTTTGGCTGTTTTAGGCTT  300

seq1  ATAGAAAATCCAGCTTTCAGCATCTGGTACTACCGTAGTACAGTTATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAATCCAGCTTTCAGCATCTGGTACTACCGTAGTACAGTTATCAA  350

seq1  ATCTAAGAAATTAACATGTGCACAATATCACTGTGAACTACACTGCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGAAATTAACATGTGCACAATATCACTGTGAACTACACTGCAGAG  400

seq1  TCGATGAGCGTTCTAGCTTTCCCACTGTCATCTGCTTTAGCATGTACTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATGAGCGTTCTAGCTTTCCCACTGTCATCTGCTTTAGCATGTACTAC  450

seq1  AGGATACTCATCACATTTAGTTGGGTTCTTTAGTCTCCCTAGTGCGTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACTCATCACATTTAGTTGGGTTCTTTAGTCTCCCTAGTGCGTCTT  500

seq1  CTGATCACTGTAAGGGGGACTGCTCATACATTTTGTGGTCTCGCTTGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCACTGTAAGGGGGACTGCTCATACATTTTGTGGTCTCGCTTGGTT  550

seq1  TTGTCAGGTGTCTTCTGATGATCCGAGTGAGGTCACACATTTTGGGGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGGTGTCTTCTGATGATCCGAGTGAGGTCACACATTTTGGGGAGT  600

seq1  ATGGCCTTTTCTGTGGATTGTAGGAGTTATTTCTAATGATATTACCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCTTTTCTGTGGATTGTAGGAGTTATTTCTAATGATATTACCTATT  650

seq1  ATCTGCCCATTAAAGTGCTAGGTGCTGGGGTAGTTACTGTAAATTTATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCCATTAAAGTGCTAGGTGCTGGGGTAGTTACTGTAAATTTATTC  700

seq1  TTTTTCCATTGTAGTTTTTAGGAGATACTTTGGTATAAGCCTCAGTGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCATTGTAGTTTTTAGGAGATACTTTGGTATAAGCCTCAGTGTTA  750

seq1  TAAGGCTAAGTAAAATCTCTAAAATAACACGATACTGTTAGTAATGTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTAAGTAAAATCTCTAAAATAACACGATACTGTTAGTAATGTAAA  800

seq1  AAAAAGAAATAAGTTCAAAACACAAGCTGAAACACAACATAAACGCAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAATAAGTTCAAAACACAAGCTGAAACACAACATAAACGCAATG  850

seq1  TGGCATCTCAGATACTGCCTGTGTGTGTGTGTGTGTGGGTGTATCTGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCTCAGATACTGCCTGTGTGTGTGTGTGTGTGGGTGTATCTGCAC  900

seq1  AGAGGCCACTGTCTTCCATCCTGTTTCTGTGAG-ATAAGAGTCTCCCATT  949
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  AGAGGCCACTGTTTTCCATCCTGTTTCTGTGAGAATAAGAGTCTCCCATT  950

seq1  -GGACTGG-ATGGGTAGGCGGCAAGCCTT-GGCAGCT-GTCT-ACATGTC  994
       ||||||| |||||||||||||||||||| ||||||| |||| |||||||
seq2  GGGACTGGAATGGGTAGGCGGCAAGCCTTGGGCAGCTGGTCTAACATGTC  1000

seq1  TAATAGTGGCAGGGTTCGCGGTG-CACGTCTATGGGTGTCGGGCTCAGAG  1043
      ||||||||||||| | ||||||| |||||||||||||||| |||||| ||
seq2  TAATAGTGGCAGGATCCGCGGTGCCACGTCTATGGGTGTC-GGCTCAAAG  1049

seq1  CTCAGATCCCCCTGCTT-GTG-TGGCAGCTGCTCTCGCCCTTGCCCACAG  1091
      |||||||||||   ||| ||| |||||||||||||||    |||||||||
seq2  CTCAGATCCCCTGCCTTGGTGTTGGCAGCTGCTCTCG--TATGCCCACAG  1097

seq1  AGACCTCTTCCCTGCCCCGCACATGCTGA-TG---CTTAACTT  1130
      |||||| |  |||| || | ||||||||| ||    |||||||
seq2  AGACCT-TCTCCTG-CCGGAACATGCTGAGTGGCCTTTAACTT  1138


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