BAC Information

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BAC

Clone NameB6Ng01-199I09
Chromosome10 (Build37)
Map Location 45,372,284 - 45,372,934
singlet/doubletsinglet
Overlap geneHace1
Upstream gene4930431F10Rik, LOC629573, LOC100041529, EG215974, Prep, Popdc3, Bves, Lin28b, Dbil5-ps, LOC100042364
Downstream geneLOC664781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199I09.bB6Ng01-199I09.g
ACCGA020835GA020836
length1,231653
definitionB6Ng01-199I09.b B6Ng01-199I09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttccagactttcaaagaagaattcatgtcaatactcctcaaatt
attccacaaaataaaaacagaagaaacactgacaaattcattttatggag
ctgctgttaccctgacacataaaccacacaaagactcaccaaagagagaa
ctatggaccaatttcccttatgaacatatatgcataaatattcaataaaa
tacttgcaaatcggatccaaaacatatcaaagttatcatcagctatatca
aagtaggctttatctcacagatgcagaaatgattcaatatatgaaaatca
ataaatatagtccaccatataaacaaagccaaaaaccacatgatcacctt
attagatacaaaaaggcctttaacaaaatccaacaccacttcatgataga
agtcctggatattagggatacacaggacatacatgaacataatataggct
atttatagcaggccaacattaagttgaatgaagagaaactcaaagcaatt
ccactaaaatcagagacaagacaaagttgtccactctctacatatctatt
tacgatagtacttaaagttttaactagagttctaagacaactgaaggaga
tccaaaggatatgaattggaaaggaaaaagtcttgatagtatacataagc
taccctaaaaattccaccaacgaactcctacagctgataataaacctttc
agcaaagtggctggctgttagattaactcacacaaatcagtatccttcct
tatacaaatggcaaacagacacagaaagaagtcagggaaattacactttt
tcccagtagccacaaataatataaatatcaagcaagtgaaagacttgtat
gattaaaacttcaagtatttgagaaaatattatttgaagtggtttatcac
aagaggtagcatgccccatgctcattggacaggttagaatttaacataat
taaaaatgaccatttgtaggggttgaccagatggctcagcagttaaaggg
cactgttatgtcccatatcacttaacctaagaatgtcactgagtagaaag
cctttgattttgggttgggtatttgcccatccttgatattgcttaagtgt
taactttgactccccaagtagtttgctacctttccttctctcactggttc
cattccacgtaattgcatcattagtcaacctagtgtgaataggcttggtg
ggaaagagaaccatatgtgattccacaaatc
gaattcatgagacagttggttagtgaactaaatatgtttaaaataaatat
ttgaaaatcaatttgtttggttccacctaatgtgttcatattttaatttt
tcattttcagtttatctagcaattatgatgcgcagatgaagagccttttg
aggattgtgaggatattttgtcatgtctttcgaattggtccctcatctcc
cagtaatggaatcgatatgggctacaatggaaataaaactccaagaagcc
aggtgttcaaggtcagaaacgttgttgttaggaggtagacataaaggaga
tgactaaaacacagcatacattcattaaaatcatgagcaagatataagtt
tggttcataacttggttacatatttcccctttcagttttgtctaatgaac
aagatttaattggtaagcttttcaagtttttcttacacataaatcaatcc
cattcgtgcttttaaggatagagatatttagtattaaagtaattatattg
aattacaagtttatttattttatgcaatattaaatgttgaagctagggct
atctgtgtgcaatggaaagttaaccctagcttactttttacttttgagac
agaatctcatttaagttggtcagactgacctgttccttgtttggtagctg
agg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_45372284_45372934
seq2: B6Ng01-199I09.g_66_718

seq1  GAATTCATGAGACAGTTGGTTAGTGAACTAAATATGTTTAAAATAAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGACAGTTGGTTAGTGAACTAAATATGTTTAAAATAAATAT  50

seq1  TTGAAAATCAATTTGTTTGGTTCCACCTAATGTGTTCATATTTTAATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATCAATTTGTTTGGTTCCACCTAATGTGTTCATATTTTAATTTT  100

seq1  TCATTTTCAGTTTATCTAGCAATTATGATGCGCAGATGAAGAGCCTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCAGTTTATCTAGCAATTATGATGCGCAGATGAAGAGCCTTTTG  150

seq1  AGGATTGTGAGGATATTTTGTCATGTCTTTCGAATTGGTCCCTCATCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGTGAGGATATTTTGTCATGTCTTTCGAATTGGTCCCTCATCTCC  200

seq1  CAGTAATGGAATCGATATGGGCTACAATGGAAATAAAACTCCAAGAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATGGAATCGATATGGGCTACAATGGAAATAAAACTCCAAGAAGCC  250

seq1  AGGTGTTCAAGGTCAGAAACGTTGTTGTTAGGAGGTAGACATAAAGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTCAAGGTCAGAAACGTTGTTGTTAGGAGGTAGACATAAAGGAGA  300

seq1  TGACTAAAACACAGCATACATTCATTAAAATCATGAGCAAGATATAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAAAACACAGCATACATTCATTAAAATCATGAGCAAGATATAAGTT  350

seq1  TGGTTCATAACTTGGTTACATATTTCCCCTTTCAGTTTTGTCTAATGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCATAACTTGGTTACATATTTCCCCTTTCAGTTTTGTCTAATGAAC  400

seq1  AAGATTTAATTGGTAAGCTTTTCAAGTTTTTCTTACACATAAATCAATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTAATTGGTAAGCTTTTCAAGTTTTTCTTACACATAAATCAATCC  450

seq1  CATTCGTGCTTTTAAGGATAGAGATATTTAGTATTAAAGTAATTATATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGTGCTTTTAAGGATAGAGATATTTAGTATTAAAGTAATTATATTG  500

seq1  AATTACAAGTTTATTTATTTTATGCAATATTAAATGTTGAAGCTAGGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAAGTTTATTTATTTTATGCAATATTAAATGTTGAAGCTAGGGCT  550

seq1  ATCTGTGTGCAATGGAAAGTTAACCCTAGCTTACTTTTTAC-TTTGAGAC  599
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATCTGTGTGCAATGGAAAGTTAACCCTAGCTTACTTTTTACTTTTGAGAC  600

seq1  AGAATCTCA-TTAAGTTGGTCAGACTGACCTGTTCCTTGTTTGGTAGCTG  648
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTCATTTAAGTTGGTCAGACTGACCTGTTCCTTGTTTGGTAGCTG  650

seq1  AGG  651
      |||
seq2  AGG  653