BAC Information

Click to search

BAC

Clone NameB6Ng01-199K15
Chromosome10 (Build37)
Map Location 123,236,212 - 123,237,239
singlet/doubletsinglet
Overlap genenone
Upstream genePpm1h, D630033A02Rik, Mon2, Usp15, LOC100042958, AI851790
Downstream gene4930503E24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199K15.bB6Ng01-199K15.g
ACCGA020939GA020940
length1,0411,179
definitionB6Ng01-199K15.b B6Ng01-199K15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttgtagtccatttgtttgcaaggttttttaaaagctctctac
ttatagggcacccagaatcactaggtgggaatgttcattcaaaaaaatgg
ctagacagcatctgagagaagctagcctagcactgtgttctcaggcttac
aggagaggctactgttacagaggtggtcacttcaggaccctcactgggtg
aggggggagatgtaattggtaatgcagccatgttggctcatttgcatctc
aactctccagattggtggcttaagttaatttattctgaacaagtttagtt
ctctaggcagacaggttgatatattgcatttcattattttttgagaatca
catattctccctgaaaggggagaagaaattgggtgcctagctcatctgag
ctgttaccttctgcttgccgacttcttggatgtagcctatgaatacttat
gtccatgtgagagagattatgaaaatatctgcccgtgaattaaggcagca
ggctctgagtctgagtgaagactttggaaacagacatctaaaagggtctc
tgattgggagaaagaaaactgttttatttgaaagtgtaagttgtgtaaga
gaatacagtcattgaacaaatttgtcatcttgcgttaatctaactggagt
aatggaattcaaattaagccttgtgcacatatttctttttttttttcttg
cagtcctgcctaataagaatatggtaaatttccgtgagaggctgcccata
gtcttattggcatattgtctgtactcgtgtagcttctcagtgaatatagg
aacccatctccaatgaatttctcttgggcatatttgtactttttaaatag
tttattaaataacccaggacaacaacggcaacttgtccttagctttactt
agttccccttaataaggaaatgctaccccaaggactagaaggattccaaa
cctcctgtgcctttcagctgtgacttttcgacactccctactccatgggg
aatttttgtagcctggcccccatccttgggtggccttttca
gaattctttatacaatttaggagaacaatacccaacttcatatggaaaaa
cagaaagctcaggttagctgggttttattggacaataaaagaacttctgg
agatgtcactatccctgatttcaagatgtactacagagcaatagtaataa
aaactgtatgatattggtataaaaacaaacaggttgatcaatggaataaa
atcgacgaaccagaaataaactcacatacttatggacacttgatatttta
caaagaattcaaaaccacaaaagggaaaaaagaaaacatcttcaacaaat
ggtgctggtccaacagtatttctgcatgtagaagaataaaaatcaaccca
aacttttcaccttgcacgaaactccaagtccaagtggatcaaatacctca
acaaaaaactggatacactaaatctaatagaagagagaatggaaaatatc
cttgaatgtattggtacaggagagaacgtcctgaacaatatgccaatatc
tcaggcactaagattaataactaataaatggaacctcataaaactgaaaa
gcttcctcaaaaccaagtacaccatcaatagaacaaaataggagcctaca
gaaagggaaaatgtcttcacaaaccctatatcccacataaggctaatatc
caatatatatattaaactcaagaaattaaatacgaataaaccaaataacc
caatttgaaaaatgtgatccaaagctagactgagaattatcgacagagga
atctctaatgactgaggaccacttaaagaaatattcagagcccttagtta
ttgtggaaatgcaaatcaaagcaatgctgagattccatcttgtactagca
gaatggctaagatcaaaaccctcgaaggacagcacatgctggcaaggatg
tagagcaaggggaatattcctctgtttgctggtgtgagtgcaaaattgta
tgggccattggaaaagccagtttgtcaggggtttcctcagaaagttgggt
attgttctacatcaaattctgggccataccaccccctgggacattatatc
caaaaattatccaccataccacagatacttccttaactatgttgaagcag
ctttattttgtaatagcagcacctggatccatctaaatgaccttcatggg
agaatggcaatgacgcaaaatcttgcgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_123236212_123237239
seq2: B6Ng01-199K15.b_43_1083

seq1  GAATTCATTTGTAGTCCATTTGTTTGCAAGGTTTTTTAAAAGCTCTCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGTAGTCCATTTGTTTGCAAGGTTTTTTAAAAGCTCTCTAC  50

seq1  TTATAGGGCACCCAGAATCACTAGGTGGGAATGTTCATTCAAAAAAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGGCACCCAGAATCACTAGGTGGGAATGTTCATTCAAAAAAATGG  100

seq1  CTAGACAGCATCTGAGAGAAGCTAGCCTAGCACTGTGTTCTCAGGCTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACAGCATCTGAGAGAAGCTAGCCTAGCACTGTGTTCTCAGGCTTAC  150

seq1  AGGAGAGGCTACTGTTACAGAGGTGGTCACTTCAGGACCCTCACTGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGCTACTGTTACAGAGGTGGTCACTTCAGGACCCTCACTGGGTG  200

seq1  AGGGGGGAGATGTAATTGGTAATGCAGCCATGTTGGCTCATTTGCATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGGAGATGTAATTGGTAATGCAGCCATGTTGGCTCATTTGCATCTC  250

seq1  AACTCTCCAGATTGGTGGCTTAAGTTAATTTATTCTGAACAAGTTTAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCCAGATTGGTGGCTTAAGTTAATTTATTCTGAACAAGTTTAGTT  300

seq1  CTCTAGGCAGACAGGTTGATATATTGCATTTCATTATTTTTTGAGAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGCAGACAGGTTGATATATTGCATTTCATTATTTTTTGAGAATCA  350

seq1  CATATTCTCCCTGAAAGGGGAGAAGAAATTGGGTGCCTAGCTCATCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTCCCTGAAAGGGGAGAAGAAATTGGGTGCCTAGCTCATCTGAG  400

seq1  CTGTTACCTTCTGCTTGCCGACTTCTTGGATGTAGCCTATGAATACTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACCTTCTGCTTGCCGACTTCTTGGATGTAGCCTATGAATACTTAT  450

seq1  GTCCATGTGAGAGAGATTATGAAAATATCTGCCCGTGAATTAAGGCAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATGTGAGAGAGATTATGAAAATATCTGCCCGTGAATTAAGGCAGCA  500

seq1  GGCTCTGAGTCTGAGTGAAGACTTTGGAAACAGACATCTAAAAGGGTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGAGTCTGAGTGAAGACTTTGGAAACAGACATCTAAAAGGGTCTC  550

seq1  TGATTGGGAGAAAGAAAACTGTTTTATTTGAAAGTGTAAGTTGTGTAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGGAGAAAGAAAACTGTTTTATTTGAAAGTGTAAGTTGTGTAAGA  600

seq1  GAATACAGTCATTGAACAAATTTGTCATCTTGCGTTAATCTAACTGGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAGTCATTGAACAAATTTGTCATCTTGCGTTAATCTAACTGGAGT  650

seq1  AATGGAATTCAAATTAAGCCTTGTGCACATATTTCTTTTTTTTTTTCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATTCAAATTAAGCCTTGTGCACATATTTCTTTTTTTTTTTCTTG  700

seq1  CAGTCCTGCCTAATAAGAATATGGTAAA-TTCCGTGAGAGGCTG-CCATA  748
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  CAGTCCTGCCTAATAAGAATATGGTAAATTTCCGTGAGAGGCTGCCCATA  750

seq1  GTCTTATTGGCATATTGTCTGTACTCGTGTAGCTTCTCAGTGAATATAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATTGGCATATTGTCTGTACTCGTGTAGCTTCTCAGTGAATATAGG  800

seq1  AA-CCATCTCCAATGAATTTCTCTTGGGCATATTTGTAC-TTTTAAATAG  846
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AACCCATCTCCAATGAATTTCTCTTGGGCATATTTGTACTTTTTAAATAG  850

seq1  TTTATTAAATAA-CCAGGACAACAACGGCAAC-TGTCCTTAGCTTTACTT  894
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  TTTATTAAATAACCCAGGACAACAACGGCAACTTGTCCTTAGCTTTACTT  900

seq1  AGT--CCCCTAATAAGGAAATGCTACCCCAAGGACTAGAAGGATT-CAAA  941
      |||  ||| |||||||||||||||||||||||||||||||||||| ||||
seq2  AGTTCCCCTTAATAAGGAAATGCTACCCCAAGGACTAGAAGGATTCCAAA  950

seq1  ACTCCTGTGCCTTTCAGCTGTGACTTTTCGACACTCCTTACTCCATGGGG  991
       |||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCTCCTGTGCCTTTCAGCTGTGACTTTTCGACACTCCCTACTCCATGGGG  1000

seq1  -ATTTTTGTAGCCTGG-CCCCATCCTTGG--TGCCTTTTCA  1028
       ||||||||||||||| ||||||||||||   |||||||||
seq2  AATTTTTGTAGCCTGGCCCCCATCCTTGGGTGGCCTTTTCA  1041