BAC Information

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BAC

Clone NameB6Ng01-200N04
Chromosome10 (Build37)
Map Location 33,926,182 - 33,927,074
singlet/doubletsinglet
Overlap geneDse
Upstream geneTrdn, A330019N05Rik, LOC100040686, EG215895, LOC100041399, Sult3a1, Rshl3, 2700019D07Rik, LOC672399, LOC666127, Rwdd1, 4732454E20Rik, BB146404, A630077B13Rik
Downstream geneTspyl1, Tspyl4, Nt5dc1, Col10a1, Frk, LOC667824
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200N04.bB6Ng01-200N04.g
ACCGA021775GA021776
length1,113884
definitionB6Ng01-200N04.b B6Ng01-200N04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgcacagtactccattgtgtaaatgtacc
acattttctgtatccattcctctgttgagggacatctgggctctttccag
cttcttgctatttattataaataaggctgctatgaacatagtggaacatg
tgtccttattataagttggagcatcttctgggtatatgcccaggagtggt
attgctggatcttcctgagtactatgtcaaattttctgtggaactgccag
actgatttccagagtggttgtaccagcttgtaatcccaccagcaatagag
gagtgatactctttctccacatcctctccagcatctgctgtcaactgagt
ttttaatcttagccattctaactagtgtgaggtgaaatctcagggctgtt
ttgatttgcattcccctgatgattaaggatgttgaacatttttttaaggt
gcttctcagccattcagtattcctcagttgagaattttttttttagctct
gtaccccattttttaatagggttaattggttttctggagtccaatttctt
gagttctttatacattatttgatattagccccttaccagatttacaattg
gtaaagatcttttcccaatctgttggttgctgtttgtcttattgacaatg
tcctttgccttacaaaagctttgcaattttatgatgtcccatttgtcaat
tcttgatcttatagcacaggccagtgctattctgttcaggaatttttccc
ctgtacccatatcttctagactcttccccactttctcctctgtaagtttc
agtgtctcttgtttatgtgcagttccttgatccaccttagacttgagctt
gtacaggagatagattagaagtcttctacatgatactgccaattgagcag
caccatttgtttaaatgttgtcttattcccattgatgttcagctaccttg
tcgaagatcaagtgaccataaggtgcgtggttcattcatgacttcggatg
tcatatccatcgatctgtctgttctggccgccgtaccgaataccatgaac
gttatacacagaattgcctctggtatgacggatcttagtagttcctggtg
catggtttcatgt
gaattccaggtgaaagaggccggcctcttgcattggaagcaaaggattag
gttatgaatgccagctggcctaaacggaggctgttgcctcaaaggagaga
tgagaaagttctcagttcacaaagttagctcagatccagcctcgacagat
tctgagcccatgtggcatcgcttacagtgctccccagcccgagtcaagcc
cgcctgccgggcccccgattggcccaggcggcctcgggttgaggttgccc
aatcactctggggtgttggagtgcaggggcgctggaatcctgtggctggg
ggtgactcagaagcagctttctgggcgttggcggtccggaggtcgcacag
gcacaaccagcatgggagcacacgaccactaccatccctagataactggt
gtagcataggaagggaacgcaagggtgtgctatctccaaacctctggaaa
ctcgggagcacgtccagtccccgccattcgctcctgatctcggtgctgct
gtctgagctgggtacccgggtaggagatcacggagccagcagagctggcc
cgagatgctcagtccacagggaaatcgacgcgcagcgggggacgtggctc
aagctggtccgtagggaccggtccagtgtagacccatggagccacaggag
ggtagcttcctggagcgtggcccagagcagcgcccaacccagcccatcac
tcaccgctccgtcctcccggcgtcctctctctgcgtcccgtgggcgcggg
actccggacccctggagtcgggccctcagctgcgcgccgagcatccgagc
tcagtcgctgcgctcggggtgcgctgctgcagctctagcgccgtgcgaac
tgggcggaaaacgtcggcggaaagaggggggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_33926182_33927074
seq2: B6Ng01-200N04.g_65_948

seq1  GAATTCCAGGTGAAAGAGGCCGGCCTCTTGCATTGGAAGCAAAGGATTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTGAAAGAGGCCGGCCTCTTGCATTGGAAGCAAAGGATTAG  50

seq1  GTTATGAATGCCAGCTGGCCTAAACGGAGGCTGTTGCCTCAAAGGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGAATGCCAGCTGGCCTAAACGGAGGCTGTTGCCTCAAAGGAGAGA  100

seq1  TGAGAAAGTTCTCAGTTCACAAAGTTAGCTCAGATCCAGCCTCGACAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAGTTCTCAGTTCACAAAGTTAGCTCAGATCCAGCCTCGACAGAT  150

seq1  TCTGAGCCCATGTGGCATCGCTTACAGTGCTCCCCAGCCCGAGTCAAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCCATGTGGCATCGCTTACAGTGCTCCCCAGCCCGAGTCAAGCC  200

seq1  CGCCTGCCGGGCCCCCGATTGGCCCAGGCGGCCTCGGGTTGAGGTTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGCCGGGCCCCCGATTGGCCCAGGCGGCCTCGGGTTGAGGTTGCCC  250

seq1  AATCACTCTGGGGTGTTGGAGTGCAGGGGCGCTGGAATCCTGTGGCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTCTGGGGTGTTGGAGTGCAGGGGCGCTGGAATCCTGTGGCTGGG  300

seq1  GGTGACTCAGAAGCAGCTTTCTGGGCGTTGGCGGTCCGGAGGTCGCACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTCAGAAGCAGCTTTCTGGGCGTTGGCGGTCCGGAGGTCGCACAG  350

seq1  GCACAACCAGCATGGGAGCACACGACCACTACCATCCCTAGATAACTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAACCAGCATGGGAGCACACGACCACTACCATCCCTAGATAACTGGT  400

seq1  GTAGCATAGGAAGGGAACGCAAGGGTGTGCTATCTCCAAACCTCTGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCATAGGAAGGGAACGCAAGGGTGTGCTATCTCCAAACCTCTGGAAA  450

seq1  CTCGGGAGCACGTCCAGTCCCCGCCATTCGCTCCTGATCTCGGTGCTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGAGCACGTCCAGTCCCCGCCATTCGCTCCTGATCTCGGTGCTGCT  500

seq1  GTCTGAGCTGGGTACCCGGGTAGGAGATCACGGAGCCAGCAGAGCTGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGCTGGGTACCCGGGTAGGAGATCACGGAGCCAGCAGAGCTGGCC  550

seq1  CGAGATGCTCAGTCCACAGGGAAATCGACGCGCAGCGGGGGACGTGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGATGCTCAGTCCACAGGGAAATCGACGCGCAGCGGGGGACGTGGCTC  600

seq1  AAGCTGGTCCGTAGGGACCGGTCCAGTGTAGACCCATGGAGCCACAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGTCCGTAGGGACCGGTCCAGTGTAGACCCATGGAGCCACAGGAG  650

seq1  GGTAGCTTCCTGGAGCGTGGCCCAGAGCAGCGCCCAACCCAGCCCATCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTTCCTGGAGCGTGGCCCAGAGCAGCGCCCAACCCAGCCCATCAC  700

seq1  TCACCGCTCCGTCCTCCCGGGCGTCCTCTCTCTGCGTCCCCGTGGGGCGC  750
      |||||||||||||||||| |||||||||||||||||| ||||| ||||| 
seq2  TCACCGCTCCGTCCTCCC-GGCGTCCTCTCTCTGCGT-CCCGT-GGGCG-  746

seq1  CGGGACTCCGGACCCCTGGAGTCGGGCCCTCAGCTTGCGCGCCGAGCCAT  800
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  CGGGACTCCGGACCCCTGGAGTCGGGCCCTCAGC-TGCGCGCCGAG-CAT  794

seq1  CCGAGCTCAGGGCGCTGCGCCCGGGGTGCGCCGCTGCAGCCTCTAGCCGC  850
      ||||||||| | |||||||| |||||||||| ||||||| |||||| |||
seq2  CCGAGCTCA-GTCGCTGCGCTCGGGGTGCGCTGCTGCAG-CTCTAG-CGC  841

seq1  CGTGCGGACTGGGCGGAGACCGTCGGCGGAGAGAGGGGGGTGG  893
      |||||| |||||||||| | |||||||||| |||||||||| |
seq2  CGTGCGAACTGGGCGGAAAACGTCGGCGGAAAGAGGGGGGTTG  884