BAC Information

Click to search

BAC

Clone NameB6Ng01-200O14
Chromosome10 (Build37)
Map Location 124,796,218 - 124,797,065
singlet/doubletsinglet
Overlap genenone
Upstream gene4930503E24Rik, LOC671416, Slc16a7
Downstream geneLOC100042987, EG668313, LOC100042992, LOC668317, LOC100042994, Lrig3, LOC100043547
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200O14.bB6Ng01-200O14.g
ACCGA021834GA021835
length1,214856
definitionB6Ng01-200O14.b B6Ng01-200O14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaccaagaagtgtcacatgtctgagaaacacttatagtaatc
catccttagccaccaggggaaacgacaatcaaaactactgtgagattcca
tcttacagctgtcagaatgctaagatcaatagcacaagtgacagctcgtg
ttttgagtccaggaagcgagggcagcactcctcctccattactggtggga
gtgcaaacgtggacagccactatggaaatcaatgtgcttggtgctgagaa
agttgggaatcaagctacctcaagatatagctataccactcttgggcatg
tatacaaaaaaaaaaaaaaaatgttccacctgccataaaataggagagtt
gctcagccatgttcattgtggctttattcatagtagccagaaattgggaa
caacctacatatccctcaggagaagaagggataaagaaagtgtggtacat
ttacacaatagagtattaatcaactgtttttaaaaatggcatcttaaaat
tggaaggaaaatggatggaactagagaagatatatcctgagtgaggcaac
tctgcaggcacaggctactgaaagagaaatctggacaccaacccagccac
aaaacctttggcctataatctgtcctgcctgcaagatgtgctggggaaaa
ggccaaacagaactagggggagcaaccaaccaatgtctgacttgacataa
ggcccactccacaagaaggaacccaggtctgacactgctggagtaaccag
gacccagagtaaaaccaaacacaacttacctaaaatcaaaccaaaccaaa
cccaaacaaagtgatcaataaaatgattcctcatgataatctgctacact
cacagatcagtgccatatctagtcatcattagaggagggcttcctctggc
ataggatgggaacagatgctgagacccagagtcagacattatggtgggaa
ggaggaggtctaaatcgtaggtctccatcaaatcccctctcctcaggagc
ttagggctttcctggtggccagaggaaggagaaagactggtaggagtcag
gagggaatggaaggacctcaaggagaaacagggctttcacaaggcttcag
ggtctaacggagggttctctggcatatatatatatatagtaaaggtatta
ggctttagacttacggactatggtaattggcattggacaggcttgctctc
taaccctcctatat
gaattccagatatttactcatccaccaagtaggaactataagacccccga
tgctgggcctccgcttaagtcccgggatgagctggccaacaccccaacat
ctcaagagaaaaccacacctgatgcaaactgcaagaggttttattatcag
ctagctgagggcaaagtccctctactgtgcagggcaggggagtttgactc
tgagctgtgacagtagggggcttttaacagctagctgaggagttgggagg
agttgcgaagagttcttctcttcctggtgtccttggtgaaatttacaagg
caggagtggggagtgagttctttttgaatttttatctccatgtcctcagc
acaggaaggcaggcatctccggttgtacagtatagaaacaaaaaggcttt
ttgctggctatagagaacaaagagcttctttttagctgtatttttaaaga
tcagggaaaacaagcttggggaacatctaggggctttaccttccagggag
aaacgctctaagtcggggtctcacagaacgaagcacaatattccatacct
gggctttgttgatctcagtataagcttttcttctcctatcaagtatctct
catctatttcacttttgagaatctgtcacttgagacatacactgtcaggt
acctcactggaccttttccttcaaacaaatgtaaaatagagagtctgttt
tcctccataagtccaaaagtagcattagaaggcctcgtatctttgctggg
agctacaatcatgaatcaaagaaaaatgaatacatttactaataaagatg
gagaaattgttttctgtacggtaagaacccaaaggcccagtcaaccccat
cagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_124796218_124797065
seq2: B6Ng01-200O14.g_69_924

seq1  GAATTCCAGATATTTACTCATCCACCAAGTAGGAACTATAAGACCCCCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATATTTACTCATCCACCAAGTAGGAACTATAAGACCCCCGA  50

seq1  TGCTGGGCCTCCGCTTAAGTCCCGGGATGAGCTGGCCAACACCCCAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGCCTCCGCTTAAGTCCCGGGATGAGCTGGCCAACACCCCAACAT  100

seq1  CTCAAGAGAAAACCACACCTGATGCAAACTGCAAGAGGTTTTATTATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAGAAAACCACACCTGATGCAAACTGCAAGAGGTTTTATTATCAG  150

seq1  CTAGCTGAGGGCAAAGTCCCTCTACTGTGCAGGGCAGGGGAGTTTGACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGAGGGCAAAGTCCCTCTACTGTGCAGGGCAGGGGAGTTTGACTC  200

seq1  TGAGCTGTGACAGTAGGGGGCTTTTAACAGCTAGCTGAGGAGTTGGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGTGACAGTAGGGGGCTTTTAACAGCTAGCTGAGGAGTTGGGAGG  250

seq1  AGTTGCGAAGAGTTCTTCTCTTCCTGGTGTCCTTGGTGAAATTTACAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCGAAGAGTTCTTCTCTTCCTGGTGTCCTTGGTGAAATTTACAAGG  300

seq1  CAGGAGTGGGGAGTGAGTTCTTTTTGAATTTTTATCTCCATGTCCTCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTGGGGAGTGAGTTCTTTTTGAATTTTTATCTCCATGTCCTCAGC  350

seq1  ACAGGAAGGCAGGCATCTCCGGTTGTACAGTATAGAAACAAAAAGGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGGCAGGCATCTCCGGTTGTACAGTATAGAAACAAAAAGGCTTT  400

seq1  TTGCTGGCTATAGAGAACAAAGAGCTTCTTTTTAGCTGTATTTTTAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGCTATAGAGAACAAAGAGCTTCTTTTTAGCTGTATTTTTAAAGA  450

seq1  TCAGGGAAAACAAGCTTGGGGAACATCTAGGGGCTTTACCTTCCAGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAAAACAAGCTTGGGGAACATCTAGGGGCTTTACCTTCCAGGGAG  500

seq1  AAACGCTCTAAGTCGGGGTCTCACAGAACGAAGCACAATATTCCATACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCTCTAAGTCGGGGTCTCACAGAACGAAGCACAATATTCCATACCT  550

seq1  GGGCTTTGTTGATCTCAGTATAAGC-TTTCTTCTCCTATCAAGTATCTCT  599
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGGCTTTGTTGATCTCAGTATAAGCTTTTCTTCTCCTATCAAGTATCTCT  600

seq1  CATCTATTTCACTTTTGAGAATCTGTCACTTGAGACATACACTGTCAGGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATTTCACTTTTGAGAATCTGTCACTTGAGACATACACTGTCAGGT  650

seq1  ACCTCACTGGACCTTTTCCTTCAAACAAATGTAAAATAGAGAGTCTGTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACTGGACCTTTTCCTTCAAACAAATGTAAAATAGAGAGTCTGTTT  700

seq1  TCCTCCATAAGTCCAAAAGTAGCATTAGAAGGCCTCGTATCTTTGCT-GG  748
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCTCCATAAGTCCAAAAGTAGCATTAGAAGGCCTCGTATCTTTGCTGGG  750

seq1  AGCTACAATCATGAATCAAAG-AAAATGAATACATTTACTAAT-AAGATG  796
      ||||||||||||||||||||| ||||||||||||||||||||| ||||||
seq2  AGCTACAATCATGAATCAAAGAAAAATGAATACATTTACTAATAAAGATG  800

seq1  GAGAAATTGTTTTCAGTACAGTAAGAACC--AAAGCCCAG-CAA-CCCAT  842
      |||||||||||||| |||| |||||||||  || |||||| ||| |||||
seq2  GAGAAATTGTTTTCTGTACGGTAAGAACCCAAAGGCCCAGTCAACCCCAT  850

seq1  CAGTTT  848
      ||||||
seq2  CAGTTT  856