BAC Information

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BAC

Clone NameB6Ng01-201A14
Chromosome10 (Build37)
Map Location 103,497,032 - 103,498,205
singlet/doubletsinglet
Overlap genenone
Upstream geneLrriq1, LOC100043277, 6430590A10Rik, Slc6a15, EG667697, LOC667701
Downstream geneEG627488, EG667692, EG667695, LOC100043292, LOC100042383
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201A14.bB6Ng01-201A14.g
ACCGA021923GA021924
length1,174981
definitionB6Ng01-201A14.b B6Ng01-201A14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaaaactcattcgtctccttaaataactttaatgttccatag
caaaaatgagggcgcagaattctcagtctctgattggcttttctgccacc
atctatgtaaaatttcctcattatcctgctcttcaataggagaaaggtta
caatttttacagtacacaggctacatagatgcatttttattaccctaagt
ccatcagtagccttaggtttcacttttggtgttgttcattatggatctaa
acaacttaacttcttatcatccccatggctcttacacttctaaaaggtgg
taaggtcataaaagcaggtaattcgtattcatttaaagttggaaattggc
gtacttattccattttatttcgctctaattccatagtttagcctatctgt
ataattttctattgtctggatttatcaatgagactttcacttgaaaaaca
gaatcttgggtgctttcaagttttgaccaatatttaagttttcacacaga
tttttatgtagacatatttttaagtgatttgacaaactctccttgaatac
tgagaatgcctgtagactttccaagccactatatcatcttcaaagtcccc
ttctctttttttgcatttgatgttgattgtttgaagtatagcaatttaaa
taacttaggagtagactctcactacagtgttattttagcttctccaggga
tagatgatgcagaatatatctatcaatacttatttgtcatttgtgtttat
ttttaaagtatctgttacaacttgtacttatttttaatcgagtgttctca
tgttaaattatagccatgtggcaataaatagatacagatgcagatacaca
catgtgaagaacttctccaatctacttcattaaattttaatgtatggaac
atatgatgaaatctatacacttaacatgaatagtaggactgtagatttcc
tcatcccaaataacagcttttactctctcttcaaattcttccttctcttg
ctttccccatttaagctgatggcatcctgctctaggatctgctgtgcaga
atgcctttcaaaatatcatcgctgttcataatatgattacattattaaaa
tggatcagaatcatatttcaaatacatagccaattctttgtgagcaagga
atcttaggcctacaatttcttatt

gaattctcacctgaggaatacccaatagctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcattatggctaagatcaaaaattcaggtgacagc
agatgcaggagaggatgtggagaaagaggaacacttctccattgttggtg
ggattgcaaacttgtacaaccactctggaaatcagtctggccgttcctca
gaaaattggacatagtactactggaggatcccgcaatacctctcctgggc
acatatccagaagatgtcccaactggtaagaaggacacatgctccactat
atttatagcaaccttatttatagtagccagaagctggaatgaacccagat
gtccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctatttaaaagaatgaatttatgaaaatcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
agaactcaaatgatatgtactcactgataagtggatattagcccagaaac
ttagtatacccgagatataagatacaatttgcaaaacacatgaaactgaa
gaagaacaaagaccaaagtgtggacacttttccccttcttagaattggaa
gcaataacccatggaaggagttacagagacaaactttggagctgagacaa
atggatggtctagagactgccatatccagagatccatctcataattagcc
tccacacgatgacaccattgcctacagtagcaagattttgctgaaaggac
cctgatatagctgtgtttgtgagactaggccggggcctagcaaaaacata
agtagatgctcaccgtcagctcttggatcgagcacagggccccagtgagg
agctagagaagtatccaagagctaagagatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_103497032_103498205
seq2: B6Ng01-201A14.b_44_1217

seq1  GAATTCAAGAAAACTCATTCGTCTCCTTAAATAACTTTAATGTTCCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAAAACTCATTCGTCTCCTTAAATAACTTTAATGTTCCATAG  50

seq1  CAAAAATGAGGGCGCAGAATTCTCAGTCTCTGATTGGCTTTTCTGCCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGAGGGCGCAGAATTCTCAGTCTCTGATTGGCTTTTCTGCCACC  100

seq1  ATCTATGTAAAATTTCCTCATTATCCTGCTCTTCAATAGGAGAAAGGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTAAAATTTCCTCATTATCCTGCTCTTCAATAGGAGAAAGGTTA  150

seq1  CAATTTTTACAGTACACAGGCTACATAGATGCATTTTTATTACCCTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTTACAGTACACAGGCTACATAGATGCATTTTTATTACCCTAAGT  200

seq1  CCATCAGTAGCCTTAGGTTTCACTTTTGGTGTTGTTCATTATGGATCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAGTAGCCTTAGGTTTCACTTTTGGTGTTGTTCATTATGGATCTAA  250

seq1  ACAACTTAACTTCTTATCATCCCCATGGCTCTTACACTTCTAAAAGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTAACTTCTTATCATCCCCATGGCTCTTACACTTCTAAAAGGTGG  300

seq1  TAAGGTCATAAAAGCAGGTAATTCGTATTCATTTAAAGTTGGAAATTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCATAAAAGCAGGTAATTCGTATTCATTTAAAGTTGGAAATTGGC  350

seq1  GTACTTATTCCATTTTATTTCGCTCTAATTCCATAGTTTAGCCTATCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTATTCCATTTTATTTCGCTCTAATTCCATAGTTTAGCCTATCTGT  400

seq1  ATAATTTTCTATTGTCTGGATTTATCAATGAGACTTTCACTTGAAAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTCTATTGTCTGGATTTATCAATGAGACTTTCACTTGAAAAACA  450

seq1  GAATCTTGGGTGCTTTCAAGTTTTGACCAATATTTAAGTTTTCACACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTGGGTGCTTTCAAGTTTTGACCAATATTTAAGTTTTCACACAGA  500

seq1  TTTTTATGTAGACATATTTTTAAGTGATTTGACAAACTCTCCTTGAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGTAGACATATTTTTAAGTGATTTGACAAACTCTCCTTGAATAC  550

seq1  TGAGAATGCCTGTAGACTTTCCAAGCCACTATATCATCTTCAAAGTCCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGCCTGTAGACTTTCCAAGCCACTATATCATCTTCAAAGTCCCC  600

seq1  TTCTCTTTTTTTGCATTTGATGTTGATTGTTTGAAGTATAGCAATTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTTTTTGCATTTGATGTTGATTGTTTGAAGTATAGCAATTTAAA  650

seq1  TAACTTAGGAGTAGACTCTCACTACAGTGTTATTTTAGCTTCTCCAGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTAGGAGTAGACTCTCACTACAGTGTTATTTTAGCTTCTCCAGGGA  700

seq1  TAGATGATGCAGAATATATCTATCAATACTTATTTGTCATTTGTGTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGATGCAGAATATATCTATCAATACTTATTTGTCATTTGTGTTTAT  750

seq1  TTTTAAAGTATCTGTTACAACTTGTACTTATTTTTAATCGAGTGTTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGTATCTGTTACAACTTGTACTTATTTTTAATCGAGTGTTCTCA  800

seq1  TGTTAAATTATAGCCATGTGGCAATAAATAGATACAGATGCAGATACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATTATAGCCATGTGGCAATAAATAGATACAGATGCAGATACACA  850

seq1  CATGTGAAGAACTTCTCCAATCTACTTCATTAAATTTTAATGTATGGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAAGAACTTCTCCAATCTACTTCATTAAATTTTAATGTATGGAAC  900

seq1  ATATGATGAAATCTATACACTTAACATGAATAGTAGGACTGTAGATTTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGAAATCTATACACTTAACATGAATAGTAGGACTGTAGATTTCC  950

seq1  TCATCCCAAATAACAGCTTTTACTCTCTCTTCAAATTCTTTCCTTCCTCT  1000
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  TCATCCCAAATAACAGCTTTTACTCTCTCTTCAAATTC-TTCCTT-CTCT  998

seq1  TGCTTTCCCCATTTAAGCTGATGGCATCCTGCTCTAGGATCTGCTGTGCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCCCCATTTAAGCTGATGGCATCCTGCTCTAGGATCTGCTGTGCA  1048

seq1  GAATGCCTTTC-ACATATCATCGCTGTTCATTATTATGATTAACATTATT  1099
      ||||||||||| | |||||||||||||||| || ||||||| ||||||||
seq2  GAATGCCTTTCAAAATATCATCGCTGTTCA-TAATATGATT-ACATTATT  1096

seq1  AAAAT-GATCAGTATCATATTTTCAATTACATAGCAAATTCTTTGTGAGC  1148
      ||||| |||||| |||||| |||||| |||||||| ||||||||||||||
seq2  AAAATGGATCAGAATCATA-TTTCAAATACATAGCCAATTCTTTGTGAGC  1145

seq1  AAGG-ATCTTA-GCCTAC-ATTTCTTATT  1174
      |||| |||||| |||||| ||||||||||
seq2  AAGGAATCTTAGGCCTACAATTTCTTATT  1174


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