BAC Information

Click to search

BAC

Clone NameB6Ng01-201D16
Chromosome10 (Build37)
Map Location 99,627,366 - 99,756,439
singlet/doubletdoublet
Overlap geneLOC100043211
Upstream geneWdr51b, Dusp6, LOC100042222, Gad1-ps, LOC100042232, LOC667502, Csl, LOC100042246, Kitl, LOC100043208
Downstream geneEG667532, LOC670007, LOC235966, LOC667556, LOC100043224, LOC100043227, LOC100043231, LOC100043235, LOC667580, LOC100043239, LOC100043242, LOC100043244, LOC667607, LOC100043247, EG213051, Tmtc3, 4930430F08Rik, 1700017N19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201D16.bB6Ng01-201D16.g
ACCGA022065GA022066
length9751,047
definitionB6Ng01-201D16.b B6Ng01-201D16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,755,861 - 99,756,439)(99,627,366 - 99,628,418)
sequence
gaattcactgtcctggagcttcttagccacttcactactttctgtattga
atgtggatctgtggaatgtcctttgtagtactcttgttaatatactagca
aattcctagcctcctccccaagctggcttcattcttgttgagctattagt
agagcttatcaaaattcaacaaccatgaaagctctgtaaccacaggttta
ttgtggcagcaacccatggctgacccattgcacaggtgctccactgtgct
aaagtctcttcccatctctttcaagtgccaccatcaaccttcaatcagcc
tgtagcagatgctgcatgtaaaaatgagaatggacactcttcctgtatga
tgaatagcagaccctgattttcattttgttttgcatcataacatgcatat
gctataaaatataaaattagaaactttactcataccctctgttagtctct
acactgtccaactaaaagatgggacttcatccacagcatttttttaatta
ggtattttcctcatttacatttccaatgctatcctaaaagtcccccatac
ccaccccccaatcccctacccacccactccccctttttggccctggcatt
cccctgtcctggggcatataaagtttgcaagtccaaagggcctctctttc
cagtgatggctgactaggccatcttttgatacatgtgcagctagagacaa
gagctccggggtactggttagttcataatgttgttccacctatagggctg
cagttccctttagctccttgggtactttctctagctcctccattgggggc
catgtgacccatccaatagctgactgtgagcatccacttctgtgtttgct
agggccctggcatagtctcacaagagacagctatatcaggtcctttcagc
aaaatcttgctagtgtatgcaatggtgtcagcgtttggaagctgattatg
ggatgggtccctggatatggcaatc
gaattcatttaaaaagaacacaacaggctctctgtgcctctgctgcagca
gactctctctctagcattgtttcagcttaacccctttgaggtgggaccac
gcctttgtttctgacttcctggactctaaaggttgaatttcaggtcacct
tagtacacttagatttccctctgacccatacaagctataaatttttcttc
aaaaacaattaaaataaatacacgtcattagatggactactgcagtgtgg
gaaaagtacaaagactagttgctttcttctagacgttgttattcacagag
gcagaagaatccattgcaagtgaggttgcttccaaagatagtgtttcaag
agcatgaagcatatgtaagaccggatgagaatataatgttgaacaagacc
agattcagctttgagcagaattaagactcatggagatctgtggttaactc
gtctatccctgctattttgtcatgtttccctcacagtgcaccgatgtttg
gtcactgtattttttctattcaatctttcttagcagttcaaatttaacta
agttagttagaggttccaggactaatcttttaaagttttcctgtaagtaa
ataaaagatttactgtgagctaaaagaaatcacagtataaagtgaaatat
aattttgaacatggacataatttgataattataagctaatgtgcttatat
atgtgacacccatcccacgcagttattcattagtatccatggtggtggtt
acaggaccacccaaactaccaaacctcacagatgctcaactttcctttaa
attaaacatagcattttatataacctatttgttgtgtcttataaaaagat
aaggagaaaaggaatatgtttggtgaaaggctcagtaatgtgtgggggga
cggggtgactttgaggcccacactgagcatctcttcccctgagtgactag
ccacatggccagtatagtataggatagagtttattagggcatggagaggg
gagctgggagatagtagaggcagaaaacgcaacggagagagtagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_99755861_99756439
seq2: B6Ng01-201D16.b_43_621 (reverse)

seq1  GAGTGGGTGGGTAGGGGATTGGGGGGTGGGTATGGGGGACTTTTAGGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGTGGGTAGGGGATTGGGGGGTGGGTATGGGGGACTTTTAGGATA  50

seq1  GCATTGGAAATGTAAATGAGGAAAATACCTAATTAAAAAAATGCTGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGAAATGTAAATGAGGAAAATACCTAATTAAAAAAATGCTGTGGA  100

seq1  TGAAGTCCCATCTTTTAGTTGGACAGTGTAGAGACTAACAGAGGGTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCCCATCTTTTAGTTGGACAGTGTAGAGACTAACAGAGGGTATGA  150

seq1  GTAAAGTTTCTAATTTTATATTTTATAGCATATGCATGTTATGATGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGTTTCTAATTTTATATTTTATAGCATATGCATGTTATGATGCAAA  200

seq1  ACAAAATGAAAATCAGGGTCTGCTATTCATCATACAGGAAGAGTGTCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATGAAAATCAGGGTCTGCTATTCATCATACAGGAAGAGTGTCCAT  250

seq1  TCTCATTTTTACATGCAGCATCTGCTACAGGCTGATTGAAGGTTGATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTTTACATGCAGCATCTGCTACAGGCTGATTGAAGGTTGATGGT  300

seq1  GGCACTTGAAAGAGATGGGAAGAGACTTTAGCACAGTGGAGCACCTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTGAAAGAGATGGGAAGAGACTTTAGCACAGTGGAGCACCTGTGC  350

seq1  AATGGGTCAGCCATGGGTTGCTGCCACAATAAACCTGTGGTTACAGAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTCAGCCATGGGTTGCTGCCACAATAAACCTGTGGTTACAGAGCT  400

seq1  TTCATGGTTGTTGAATTTTGATAAGCTCTACTAATAGCTCAACAAGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGTTGTTGAATTTTGATAAGCTCTACTAATAGCTCAACAAGAATG  450

seq1  AAGCCAGCTTGGGGAGGAGGCTAGGAATTTGCTAGTATATTAACAAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGCTTGGGGAGGAGGCTAGGAATTTGCTAGTATATTAACAAGAGT  500

seq1  ACTACAAAGGACATTCCACAGATCCACATTCAATACAGAAAGTAGTGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAAAGGACATTCCACAGATCCACATTCAATACAGAAAGTAGTGAAG  550

seq1  TGGCTAAGAAGCTCCAGGACAGTGAATTC  579
      |||||||||||||||||||||||||||||
seq2  TGGCTAAGAAGCTCCAGGACAGTGAATTC  579

seq1: chr10_99627366_99628418
seq2: B6Ng01-201D16.g_63_1109

seq1  GAATTCATTTAAAAAGAACACAACAGGCTCTCTGTGCCTCTGCTGCAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTAAAAAGAACACAACAGGCTCTCTGTGCCTCTGCTGCAGCA  50

seq1  GACTCTCTCTCTAGCATTGTTTCAGCTTAACCCCTTTGAGGTGGGACCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTCTCTCTAGCATTGTTTCAGCTTAACCCCTTTGAGGTGGGACCAC  100

seq1  GCCTTTGTTTCTGACTTCCTGGACTCTAAAGGTTGAATTTCAGGTCACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGTTTCTGACTTCCTGGACTCTAAAGGTTGAATTTCAGGTCACCT  150

seq1  TAGTACACTTAGATTTCCCTCTGACCCATACAAGCTATAAATTTTTCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACACTTAGATTTCCCTCTGACCCATACAAGCTATAAATTTTTCTTC  200

seq1  AAAAACAATTAAAATAAATACACGTCATTAGATGGACTACTGCAGTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAATTAAAATAAATACACGTCATTAGATGGACTACTGCAGTGTGG  250

seq1  GAAAAGTACAAAGACTAGTTGCTTTCTTCTAGACGTTGTTATTCACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTACAAAGACTAGTTGCTTTCTTCTAGACGTTGTTATTCACAGAG  300

seq1  GCAGAAGAATCCATTGCAAGTGAGGTTGCTTCCAAAGATAGTGTTTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGAATCCATTGCAAGTGAGGTTGCTTCCAAAGATAGTGTTTCAAG  350

seq1  AGCATGAAGCATATGTAAGACCGGATGAGAATATAATGTTGAACAAGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAAGCATATGTAAGACCGGATGAGAATATAATGTTGAACAAGACC  400

seq1  AGATTCAGCTTTGAGCAGAATTAAGACTCATGGAGATCTGTGGTTAACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCAGCTTTGAGCAGAATTAAGACTCATGGAGATCTGTGGTTAACTC  450

seq1  GTCTATCCCTGCTATTTTGTCATGTTTCCCTCACAGTGCACCGATGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCCCTGCTATTTTGTCATGTTTCCCTCACAGTGCACCGATGTTTG  500

seq1  GTCACTGTATTTTTTCTATTCAATCTTTCTTAGCAGTTCAAATTTAACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGTATTTTTTCTATTCAATCTTTCTTAGCAGTTCAAATTTAACTA  550

seq1  AGTTAGTTAGAGGTTCCAGGACTAATCTTTTAAAGTTTTCCTGTAAGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTTAGAGGTTCCAGGACTAATCTTTTAAAGTTTTCCTGTAAGTAA  600

seq1  ATAAAAGATTTACTGTGAGCTAAAAGAAATCACAGTATAAAGTGAAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGATTTACTGTGAGCTAAAAGAAATCACAGTATAAAGTGAAATAT  650

seq1  AATTTTGAACATGGACATAATTTGATAATTATAAGCTAATGTGCTTATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGAACATGGACATAATTTGATAATTATAAGCTAATGTGCTTATAT  700

seq1  ATGTGACACCCATCCCACGCAGTTATTCATTAGTATCCATGGTGGTGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACACCCATCCCACGCAGTTATTCATTAGTATCCATGGTGGTGGTT  750

seq1  ACAGGACCACCCAAACTACCAAACCTCACAGATGCTCAACTTTCCTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACCACCCAAACTACCAAACCTCACAGATGCTCAACTTTCCTTTAA  800

seq1  ATTAAACATAGCATTTTATATAACCTATTTGTTGTGTCTTATAAAAAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACATAGCATTTTATATAACCTATTTGTTGTGTCTTATAAAAAGAT  850

seq1  AAGGAGAAAAGGAATATGTTTGGTG-AAGGCTCAGTAATGTGTGGGGGGA  899
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAGGAGAAAAGGAATATGTTTGGTGAAAGGCTCAGTAATGTGTGGGGGGA  900

seq1  CGGGGTGACTTTGAGGGCCCACACTGAGGCATCTCTTCCCCCTGAGTGAC  949
      |||||||||||||| |||||||||||| ||||||||| ||||||||||||
seq2  CGGGGTGACTTTGA-GGCCCACACTGA-GCATCTCTT-CCCCTGAGTGAC  947

seq1  TAGCCACATGGCCAGTATAGTATAGAATAGAGTTTATTTAGGGCATGGAG  999
      ||||||||||||||||||||||||| |||||||||| |||||||||||||
seq2  TAGCCACATGGCCAGTATAGTATAGGATAGAGTTTA-TTAGGGCATGGAG  996

seq1  AGGGGAGCTGGGAGGATAGTAGAGGCAGAGAAAGGCAAAGGGAGAGAGTA  1049
      ||||||||||||| ||||||||||||||| ||| || || ||||||||||
seq2  AGGGGAGCTGGGA-GATAGTAGAGGCAGA-AAACGC-AACGGAGAGAGTA  1043

seq1  GAGA  1053
      ||||
seq2  GAGA  1047