BAC Information

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BAC

Clone NameB6Ng01-201E08
Chromosome10 (Build37)
Map Location 127,486,059 - 127,688,744
singlet/doubletdoublet
Overlap genePtges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless
Upstream geneCyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca
Downstream geneApon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14, Ormdl2, 1110005A23Rik, Gdf11, Cd63, Rdh5, Bloc1s1, Itga7, Mettl7b, Olfr9, Olfr763, EG622733, EG546487, Olfr765, Olfr768, Olfr769, Olfr770, Olfr771, Olfr772, Olfr773-ps1, LOC624925, Olfr774, Olfr1518
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201E08.bB6Ng01-201E08.g
ACCGA022093GA022094
length6741,128
definitionB6Ng01-201E08.b B6Ng01-201E08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,486,059 - 127,486,730)(127,687,633 - 127,688,744)
sequence
gaattcaaattcatggctcttcttctgcctcaacctctccttagttggca
ctgactgattccccgggtcatcctggttcattttccagcaagtacatggt
gattcactattatctgctctgaggttcaaggaatctgacaccctgtctaa
actttgggtactaggtacacatatgatagacaagacttttaaagagtttg
tgagccgggcgtggtggcgcacacctttaatcccagcactcgggaggcag
aggcaggcagatttctgagttcgaggccagcctggtctacaaagtgagtt
ctaggacagccagggctatacagggaaaccctgcctcgaaaaaccaaaaa
aaaaaatttgtgtgttggtaaggatgggtttgcatccataccacagagta
ccacgaaagtaaaaagacagctttcaggaacccattctcttatacctcat
aggaatggaacttaggctgtaagtgttgggagcaggaattttcattcatt
gagccatggtgccagccatgtaccttctttgtttttgaaactggtatgga
agttactctagaccagtcttacctcagactcaaaaagatctgcttctgga
ttaaggtgtatacaaccattcttgagacctgcaatgttctaagcacttgg
atatgcaagaccctgtactcgaga
gaattctccagaaggtttcctacaggtacacagcaggtgagatcgctgcc
agggaggaccggcctttctggccactcttctgctctatcagtcattgagt
aagcatgacccccccccccaaccaggaatgacccacaggagttgtgaatt
ggacttacacccagcacctagctcagtgctacaccaggtcacattcactg
tgaatacagctattagcaatgaatacagggaaggatctgggccatgtaaa
aagttagcctgtgagatccacactcagagtcaatgggggcgcgaggggag
cggccgggcaagatgttaaagcgccactggactgggcgcccgagcaacta
ttcccacttcctgggtcagacaggcagtaagattgcctctctgtgcaagt
tctgagctgacccttgaaggctggttgagggtcaagaggaagaaggtatg
tgggggtgtgcacatgtctgtgtgtgtggaccttggatgtgtggctgcag
ccttccaataggactgggcagatcaactggtcatgcatgaacagacctgc
catgtgcagggtggaaagcagtcggggttggctgtggtgtaaagcagatg
tggctggatggccacgcaaagacagacatgcctccaggaggctgcggcac
acagaaccatcagtgctgcagacagacaagggggcagtgtagaacaccat
ttagggaaggggaggctaaaggggagagagacttgagtaagagacctgac
ttgggaaccttgggaggcaaaggcaaggcagcagggaggatctgggcaaa
caacacggtgtcctctgaggaggaccagagcgagctccagggctgacacg
gtcccgctcgctcgctctgacactcacctgccctgagctgggcggccgga
tcccctagcttgcgtagcaggttgctgaaactggttcgttcttcattgct
tcttcatttttcctctgtcagaaggcaacaagagggattgccttgggagc
agcctgcagaaacgggtgaacatgtggcagaggactgctctgtatcacta
cccaggtcctagccacccagtgtccatgtggctaccattcctcttctcgg
tacatttgctggtctggcaatcagggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_127486059_127486730
seq2: B6Ng01-201E08.b_49_722

seq1  GAATTCAAATTCATGGCTCTTCTTCTGCCTCAACCTCTCCTTAGTTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTCATGGCTCTTCTTCTGCCTCAACCTCTCCTTAGTTGGCA  50

seq1  CTGACTGATTCCCCGGGTCATCCTGGTTCATTTTCCAGCAAGTACATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGATTCCCCGGGTCATCCTGGTTCATTTTCCAGCAAGTACATGGT  100

seq1  GATTCACTATTATCTGCTCTGAGGTTCAAGGAATCTGACACCCTGTCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACTATTATCTGCTCTGAGGTTCAAGGAATCTGACACCCTGTCTAA  150

seq1  ACTTTGGGTACTAGGTACACATATGATAGACAAGACTTTTAAAGAGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGGTACTAGGTACACATATGATAGACAAGACTTTTAAAGAGTTTG  200

seq1  TGAGCCGGGCGTGGTGGCGCACACCTTTAATCCCAGCACTCGGGAGGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCGGGCGTGGTGGCGCACACCTTTAATCCCAGCACTCGGGAGGCAG  250

seq1  AGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTT  300

seq1  CTAGGACAGCCAGGGCTATACAGGGAAACCCTGCCTCGAAAAACCAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGACAGCCAGGGCTATACAGGGAAACCCTGCCTCGAAAAACCAAAAA  350

seq1  AAAAAATTTGTGTGTTGGTAAGGATGGGTTTGCATCCATACCACAGAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTTGTGTGTTGGTAAGGATGGGTTTGCATCCATACCACAGAGTA  400

seq1  CCACGAAAGTAAAAAGACAGCTTTCAGGAACCCATTCTCTTATACCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGAAAGTAAAAAGACAGCTTTCAGGAACCCATTCTCTTATACCTCAT  450

seq1  AGGAATGGAACTTAGGCTGTAAGTGTTGGGAGCAGGAATTTTCATTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGGAACTTAGGCTGTAAGTGTTGGGAGCAGGAATTTTCATTCATT  500

seq1  GAGCCATGGTGCCAGCCATGTACCTTCTTTG-TTTTGAAACTGGTATGGA  549
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAGCCATGGTGCCAGCCATGTACCTTCTTTGTTTTTGAAACTGGTATGGA  550

seq1  AGTTACTCTAGACCAGGCTTACCTCAGACTCAAAAAGATCTGCTTCTGGA  599
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTTACTCTAGACCAGTCTTACCTCAGACTCAAAAAGATCTGCTTCTGGA  600

seq1  TTAAGGTGTATACAACCATTCTTGAGACCTGCAATGTTCTAAGCAC-TGG  648
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTAAGGTGTATACAACCATTCTTGAGACCTGCAATGTTCTAAGCACTTGG  650

seq1  ATATGCAAGACCTAGTACTCGAGA  672
      ||||||||||||  ||||||||||
seq2  ATATGCAAGACCCTGTACTCGAGA  674

seq1: chr10_127687633_127688744
seq2: B6Ng01-201E08.g_69_1196 (reverse)

seq1  CTCCCTGAT---CCGAGCAGCAAATG-ACCGAGAAGAGG-ATGGTAAGCA  45
      |||||||||   | || ||||||||| |||||||||||| ||||||  ||
seq2  CTCCCTGATTGCCAGACCAGCAAATGTACCGAGAAGAGGAATGGTAGCCA  50

seq1  C-TGGACACTGGGTGGCCTGGGCCTGG--TGTGATCCAGAGCAGTTCCTC  92
      | |||||||||||||||  || |||||   ||||| |||||||| |||||
seq2  CATGGACACTGGGTGGCTAGGACCTGGGTAGTGATACAGAGCAG-TCCTC  99

seq1  TGCCACATTGTCA-CCGTGTCTGCAGGCTGCTCCC-AGGCAATCCCTC-T  139
      ||||||||  ||| |||| |||||||||||||||| |||||||||||| |
seq2  TGCCACATGTTCACCCGTTTCTGCAGGCTGCTCCCAAGGCAATCCCTCTT  149

seq1  GGTGCC-TCTGACAGAGG-AAAATGAGGAAGCAATGGAGAACGAA-CAGT  186
      | |||| ||||||||||| ||||||| ||||||||| |||||||| ||||
seq2  GTTGCCTTCTGACAGAGGAAAAATGAAGAAGCAATGAAGAACGAACCAGT  199

seq1  TTCAGC-ATCTGCTACGCAAGCTA-GGGATCCGGCCGCCCAGCTCAGGGC  234
      |||||| | ||||||||||||||| |||||||||||||||||||||||||
seq2  TTCAGCAACCTGCTACGCAAGCTAGGGGATCCGGCCGCCCAGCTCAGGGC  249

seq1  AGGTGAGTGTCAGAGCGAGCGAGCGGGACCGTGTCAGCCCTGGAGCTCGC  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGTGTCAGAGCGAGCGAGCGGGACCGTGTCAGCCCTGGAGCTCGC  299

seq1  TCTGGTCCTCCTCAGAGGACACCGTGTTG-TTGCCCAGATCCTCCCTGCT  333
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCTGGTCCTCCTCAGAGGACACCGTGTTGTTTGCCCAGATCCTCCCTGCT  349

seq1  GCCTTGCCTTTGCCTCCCAAGGTTCCCAAGTCAGGTCTCTTACTCAAGTC  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGCCTTTGCCTCCCAAGGTTCCCAAGTCAGGTCTCTTACTCAAGTC  399

seq1  TCTCTCCCCTTTAGCCTCCCCTTCCCTAAATGGTGTTCTACACTGCCCCC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCCTTTAGCCTCCCCTTCCCTAAATGGTGTTCTACACTGCCCCC  449

seq1  TTGTCTGTCTGCAGCACTGATGGTTCTGTGTGCCGCAGCCTCCTGGAGGC  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTCTGCAGCACTGATGGTTCTGTGTGCCGCAGCCTCCTGGAGGC  499

seq1  ATGTCTGTCTTTGCGTGGCCATCCAGCCACATCTGCTTTACACCACAGCC  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTCTTTGCGTGGCCATCCAGCCACATCTGCTTTACACCACAGCC  549

seq1  AACCCCGACTGCTTTCCACCCTGCACATGGCAGGTCTGTTCATGCATGAC  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCGACTGCTTTCCACCCTGCACATGGCAGGTCTGTTCATGCATGAC  599

seq1  CAGTTGATCTGCCCAGTCCTATTGGAAGGCTGCAGCCACACATCCAAGGT  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGATCTGCCCAGTCCTATTGGAAGGCTGCAGCCACACATCCAAGGT  649

seq1  CCACACACACAGACATGTGCACACCCCCACATACCTTCTTCCTCTTGACC  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACACAGACATGTGCACACCCCCACATACCTTCTTCCTCTTGACC  699

seq1  CTCAACCAGCCTTCAAGGGTCAGCTCAGAACTTGCACAGAGAGGCAATCT  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCAGCCTTCAAGGGTCAGCTCAGAACTTGCACAGAGAGGCAATCT  749

seq1  TACTGCCTGTCTGACCCAGGAAGTGGGAATAGTTGCTCGGGCGCCCAGTC  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCTGTCTGACCCAGGAAGTGGGAATAGTTGCTCGGGCGCCCAGTC  799

seq1  CAGTGGCGCTTTAACATCTTGCCCGGCCGCTCCCCTCGCGCCCCCATTGA  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCGCTTTAACATCTTGCCCGGCCGCTCCCCTCGCGCCCCCATTGA  849

seq1  CTCTGAGTGTGGATCTCACAGGCTAACTTTTTACATGGCCCAGATCCTTC  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTGTGGATCTCACAGGCTAACTTTTTACATGGCCCAGATCCTTC  899

seq1  CCTGTATTCATTGCTAATAGCTGTATTCACAGTGAATGTGACCTGGTGTA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATTCATTGCTAATAGCTGTATTCACAGTGAATGTGACCTGGTGTA  949

seq1  GCACTGAGCTAGGTGCTGGGTGTAAGTCCAATTCACAACTCCTGTGGGTC  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGAGCTAGGTGCTGGGTGTAAGTCCAATTCACAACTCCTGTGGGTC  999

seq1  ATTCCTGGTTGGGGGGGGGGGTCATGCTTACTCAATGACTGATAGAGCAG  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGGTTGGGGGGGGGGGTCATGCTTACTCAATGACTGATAGAGCAG  1049

seq1  AAGAGTGGCCAGAAAGGCCGGTCCTCCCTGGCAGCGATCTCACCTGCTGT  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGGCCAGAAAGGCCGGTCCTCCCTGGCAGCGATCTCACCTGCTGT  1099

seq1  GTACCTGTAGGAAACCTTCTGGAGAATTC  1112
      |||||||||||||||||||||||||||||
seq2  GTACCTGTAGGAAACCTTCTGGAGAATTC  1128