BAC Information

Click to search

BAC

Clone NameB6Ng01-201I21
Chromosome10 (Build37)
Map Location 119,174,886 - 119,356,658
singlet/doubletdoublet
Overlap geneGrip1
Upstream geneLOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417, Cand1
Downstream geneHelb, Irak3, Tmbim4, 1190005P17Rik, Hmga2, LOC100042902, Msrb3, LOC100043488
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201I21.bB6Ng01-201I21.g
ACCGA022295GA022296
length1,010900
definitionB6Ng01-201I21.b B6Ng01-201I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,355,652 - 119,356,658)(119,174,886 - 119,175,773)
sequence
gaattcctgagttagagatggattcagaagtaggaggaagaggaggacaa
agaagacttcagcgattccaattggtttgcctgctggatatcggtgtctg
tacctgagaaaggggtctgagagaacagtgggaagtttacagtggtgagt
gactgaagccagcacaagtatatacaagggaaactcatgatgttgaaatt
atgaaggaagttttattttaggtagttttaatattttaagttttattcta
tatgtatggatagtttgtctgcatggatgtctgtgtgctacatgcatgcc
tagagtctagagaacgtttggagacagtaaccatgggacaggagtttcac
acagtgtgagttgtcatggggattctggaaactaaacctgcatcctctgg
aagaccacttagtgttcttaatcaccgccctcttgccgtctctctaacct
tggcttgggttgtcttgtccatctcatcgtggtccataagaccctctttc
tatggcatagcattaagacggaaggcatagcaataaaagcgacaggaagc
atgttcagcaaacagacgctggtgaggtgctttgcttctacagggttaat
caatcgcatagattaaaagaaagacgaaaaaagagagaaggaaacaaaaa
caaaaagccaaacccgaacccttgggcagagaatgggaaacactactgat
caaatctcccagtcacacatttggaaacgctggggtcagcgattgtctgt
ggttccctccaagtccttcatgtgggtaatggtgcctgttacattagcag
atgtgtccaggcacctgctgagtgaatggacacattcgtagcaagccctg
gcttgtggctaacagaattacactcaatggcacagtagcaacaagacaga
ggaatggctgacagctaattttccttcagtttatgcggtggttgccggtg
cactgggcagtggcaactggccgcccatgcaaaagatgaatgctactatt
gttgttatat
gaattcttgggggatggggtggatgagccagagagagcttcatctgagct
acaggaagagatcaacacagatggagaaagaaggcagagctaagagcttt
actggaggggcctttggcaggcataggtttggatgcaagatgtacttatt
gagaagacgaggcagggagatctttgagtaggcaaatgtcgtctaaggaa
gcagtgtctgtcatggtggttgggagggaggaaaggcatagtgtgtggct
ctgtcgtgagctgtcaggtgggagggaacaaggtggagacaacagagaag
gaagcagctgctgggcatgaatgactgattgtcctcaggaagcacaaaca
agcaagccgagacatctcagctgagggagggggcagacattaatgattct
gaagaaaatgaataggcatgccttggtgctctctactgaatgctaatgtt
aggggttctccagagctcagtgctctcattaagttacatcctatctatct
gctgtaaatccaaagggtacacagcctactcaggatggaagcgaaggtgc
tccccgagcagggttagaacaaacactgaaacaagttacaggtcaaactc
agctatgtggataactcagcctgcgtaaggcagtgtgacccacctgcctt
tgacacaggaggcaaacctaacctggtgacaaaaaagatgtccagtgcca
aaagggagagaacggaagaaaagcagacgttcacatttagtgcaggatga
tggtaattctggcatctggtgcactgaagaaggatctgggagaactgatt
attatatatttcattttaacccccttcagatattaaggagttattgctca
cttcatacaccccaaactaaaattcatttttgtaaatggagttatatttt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_119355652_119356658
seq2: B6Ng01-201I21.b_47_1056 (reverse)

seq1  ATATAACAACAATAGTAGCAATCATCTTTGGCATGGGCGGCCAG-TGCCA  49
      |||||||||||||||||||| |||||||| |||||||||||||| |||||
seq2  ATATAACAACAATAGTAGCATTCATCTTTTGCATGGGCGGCCAGTTGCCA  50

seq1  CTG-CCAGTGCCACCGCCACCACCGCATAAACTG-AGGAAAA-TAGCTGT  96
      ||| |||||||  | || |||||||||||||||| ||||||| |||||||
seq2  CTGCCCAGTGCACCGGCAACCACCGCATAAACTGAAGGAAAATTAGCTGT  100

seq1  CAGCCATTCCTCTGTCTTGTTGCTACTGTGCCATTGGGTTGTAATTCTGT  146
      |||||||||||||||||||||||||||||||||||| | |||||||||||
seq2  CAGCCATTCCTCTGTCTTGTTGCTACTGTGCCATTGAG-TGTAATTCTGT  149

seq1  TAGCCACAAGCCAGGGCTTGCTACGAATGTGTCCATTCACTCAGCAGGTG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACAAGCCAGGGCTTGCTACGAATGTGTCCATTCACTCAGCAGGTG  199

seq1  CCTGGACACATCTGCTAATGTAACAGGCACCATTACCCACATGAAGGACT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACACATCTGCTAATGTAACAGGCACCATTACCCACATGAAGGACT  249

seq1  TGGAGGGAACCACAGACAATCGCTGACCCCAGCGTTTCCAAATGTGTGAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGAACCACAGACAATCGCTGACCCCAGCGTTTCCAAATGTGTGAC  299

seq1  TGGGAGATTTGATCAGTAGTGTTTCCCATTCTCTGCCCAAGGGTTCGGGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGATTTGATCAGTAGTGTTTCCCATTCTCTGCCCAAGGGTTCGGGT  349

seq1  TTGGCTTTTTGTTTTTGTTTCCTTCTCTCTTTTTTCGTCTTTCTTTTAAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTTTTGTTTTTGTTTCCTTCTCTCTTTTTTCGTCTTTCTTTTAAT  399

seq1  CTATGCGATTGATTAACCCTGTAGAAGCAAAGCACCTCACCAGCGTCTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCGATTGATTAACCCTGTAGAAGCAAAGCACCTCACCAGCGTCTGT  449

seq1  TTGCTGAACATGCTTCCTGTCGCTTTTATTGCTATGCCTTCCGTCTTAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAACATGCTTCCTGTCGCTTTTATTGCTATGCCTTCCGTCTTAAT  499

seq1  GCTATGCCATAGAAAGAGGGTCTTATGGACCACGATGAGATGGACAAGAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGCCATAGAAAGAGGGTCTTATGGACCACGATGAGATGGACAAGAC  549

seq1  AACCCAAGCCAAGGTTAGAGAGACGGCAAGAGGGCGGTGATTAAGAACAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAGCCAAGGTTAGAGAGACGGCAAGAGGGCGGTGATTAAGAACAC  599

seq1  TAAGTGGTCTTCCAGAGGATGCAGGTTTAGTTTCCAGAATCCCCATGACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGTCTTCCAGAGGATGCAGGTTTAGTTTCCAGAATCCCCATGACA  649

seq1  ACTCACACTGTGTGAAACTCCTGTCCCATGGTTACTGTCTCCAAACGTTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACACTGTGTGAAACTCCTGTCCCATGGTTACTGTCTCCAAACGTTC  699

seq1  TCTAGACTCTAGGCATGCATGTAGCACACAGACATCCATGCAGACAAACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACTCTAGGCATGCATGTAGCACACAGACATCCATGCAGACAAACT  749

seq1  ATCCATACATATAGAATAAAACTTAAAATATTAAAACTACCTAAAATAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATACATATAGAATAAAACTTAAAATATTAAAACTACCTAAAATAAA  799

seq1  ACTTCCTTCATAATTTCAACATCATGAGTTTCCCTTGTATATACTTGTGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTTCATAATTTCAACATCATGAGTTTCCCTTGTATATACTTGTGC  849

seq1  TGGCTTCAGTCACTCACCACTGTAAACTTCCCACTGTTCTCTCAGACCCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCAGTCACTCACCACTGTAAACTTCCCACTGTTCTCTCAGACCCC  899

seq1  TTTCTCAGGTACAGACACCGATATCCAGCAGGCAAACCAATTGGAATCGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGGTACAGACACCGATATCCAGCAGGCAAACCAATTGGAATCGC  949

seq1  TGAAGTCTTCTTTGTCCTCCTCTTCCTCCTACTTCTGAATCCATCTCTAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCTTCTTTGTCCTCCTCTTCCTCCTACTTCTGAATCCATCTCTAA  999

seq1  CTCAGGAATTC  1007
      |||||||||||
seq2  CTCAGGAATTC  1010

seq1: chr10_119174886_119175773
seq2: B6Ng01-201I21.g_69_968

seq1  GAATTCTTGGGGGATGGGGTGGATGAGCCAGAGAGAGCTTCATCTGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGGGATGGGGTGGATGAGCCAGAGAGAGCTTCATCTGAGCT  50

seq1  ACAGGAAGAGATCAACACAGATGGAGAAAGAAGGCAGAGCTAAGAGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGAGATCAACACAGATGGAGAAAGAAGGCAGAGCTAAGAGCTTT  100

seq1  ACTGGAGGGGCCTTTGGCAGGCATAGGTTTGGATGCAAGATGTACTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGGGGCCTTTGGCAGGCATAGGTTTGGATGCAAGATGTACTTATT  150

seq1  GAGAAGACGAGGCAGGGAGATCTTTGAGTAGGCAAATGTCGTCTAAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGACGAGGCAGGGAGATCTTTGAGTAGGCAAATGTCGTCTAAGGAA  200

seq1  GCAGTGTCTGTCATGGTGGTTGGGAGGGAGGAAAGGCATAGTGTGTGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTCTGTCATGGTGGTTGGGAGGGAGGAAAGGCATAGTGTGTGGCT  250

seq1  CTGTCGTGAGCTGTCAGGTGGGAGGGAACAAGGTGGAGACAACAGAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCGTGAGCTGTCAGGTGGGAGGGAACAAGGTGGAGACAACAGAGAAG  300

seq1  GAAGCAGCTGCTGGGCATGAATGACTGATTGTCCTCAGGAAGCACAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGCTGCTGGGCATGAATGACTGATTGTCCTCAGGAAGCACAAACA  350

seq1  AGCAAGCCGAGACATCTCAGCTGAGGGAGGGGGCAGACATTAATGATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCCGAGACATCTCAGCTGAGGGAGGGGGCAGACATTAATGATTCT  400

seq1  GAAGAAAATGAATAGGCATGCCTTGGTGCTCTCTACTGAATGCTAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATGAATAGGCATGCCTTGGTGCTCTCTACTGAATGCTAATGTT  450

seq1  AGGGGTTCTCCAGAGCTCAGTGCTCTCATTAAGTTACATCCTATCTATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTCTCCAGAGCTCAGTGCTCTCATTAAGTTACATCCTATCTATCT  500

seq1  GCTGTAAATCCAAAGGGTACACAGCCTACTCAGGATGGAAGCGAAGGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAAATCCAAAGGGTACACAGCCTACTCAGGATGGAAGCGAAGGTGC  550

seq1  TCCCCGAGCAGGGTTAGAACAAACACTGAAACAAGTTACAGGTCAAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCGAGCAGGGTTAGAACAAACACTGAAACAAGTTACAGGTCAAACTC  600

seq1  AGCTATGTGGATAACTCAGCCTGCGTAAGGCAGTGTGACCCACCTGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGTGGATAACTCAGCCTGCGTAAGGCAGTGTGACCCACCTGCCTT  650

seq1  TGACACAGGAGGCAAACCTAACCTGGTGACAAAAAAGATGTCCAGTGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAGGAGGCAAACCTAACCTGGTGACAAAAAAGATGTCCAGTGCCA  700

seq1  AAAGGGAGAGAACGGAAGAAAAGCAGACG-TCACATTTAGTGCAGGATGA  749
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAAGGGAGAGAACGGAAGAAAAGCAGACGTTCACATTTAGTGCAGGATGA  750

seq1  TGGTAATTCTGGCATCTGGTGCACTGAAGAAGGATCT-GGAGAACTGA-T  797
      ||||||||||||||||||||||||||||||||||||| |||||||||| |
seq2  TGGTAATTCTGGCATCTGGTGCACTGAAGAAGGATCTGGGAGAACTGATT  800

seq1  ATTATATA-TTCATTTTAACCCCC-TCAGATATT-AGGAG-TATTGCTCA  843
      |||||||| ||||||||||||||| ||||||||| ||||| |||||||||
seq2  ATTATATATTTCATTTTAACCCCCTTCAGATATTAAGGAGTTATTGCTCA  850

seq1  CTTCATAC-TCCCAAACT-AAATTCA-TTTTGTAA--TGAGTTATATTTT  888
      ||||||||  |||||||| ||||||| ||||||||   ||||||||||||
seq2  CTTCATACACCCCAAACTAAAATTCATTTTTGTAAATGGAGTTATATTTT  900