BAC Information

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BAC

Clone NameB6Ng01-201L01
Chromosome10 (Build37)
Map Location 126,325,222 - 126,488,132
singlet/doubletdoublet
Overlap geneXrcc6bp1, LOC622567, Ctdsp2, Avil, Tsfm, Mettl1, Cyp27b1
Upstream geneLrig3, LOC100043547, LOC668336
Downstream geneMarch9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440, Myo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16, AY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201L01.bB6Ng01-201L01.g
ACCGA022392GA022393
length805554
definitionB6Ng01-201L01.b B6Ng01-201L01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,325,222 - 126,326,022)(126,487,573 - 126,488,132)
sequence
gaattcccactttgcaaaatcacaaaaagtccgtagacaaggtcctgaat
gatcttggttaattaaattgaaaacaagtttcaaggagctggagagatgg
ctcagtggttaagagagctgcctgctgttccaaaggacccaagtttaatc
tccaatggccatggtgggcagcccacaacacgtgtaactccagctctggg
gatctgatgccctcttctggcctccaaaggcatctacactcatatgcaca
tgcccacacacagtcacaaatacatgtaaccaaaataaaacctatctttt
taaaaaaataaaatatacttcacttccacacctctccttcataatttttc
agctgactggtgatagattaactttttgctacttatcctgaggcaacagg
aaactattcacagacactcagacttaaaaggtgcctctggttttaggcag
aaagaaaaattaaacataatcttttcataggtctcagttttgctatgaga
ataacttgtctaatatcttaaatctgttgatcttaaaacttccatgtttt
aagaaacgtaaggaccccgccatttcaatgcctagagggcttttaaaatc
cttatttctctcttttcctaactaaaactcaaaagaatatccattaaaga
taactgtggtggtttgaataagcttggcccactgttaggaggcgtggcct
tgttggagtgggtgtgtctctgtggggtgggctttaagaccttcatccct
agctgcctggaagtcaattttccactagcagcccttaggaacaagagggt
ggggg
ccaggtaccacagggtacaatctaggtcatgaaacagaaaatggattcag
cagggtgaggctggggaacacagcgcctccagtccccttgtctccagctt
ccaaatgcaggagtagggggccagttttctctcctccctccccccacccc
cttccacacactgccagcttcctctgctccccgctagcattttatctatt
tcctgctttccttcccccatcacctcaacacttctttgatcacagccttt
aacaggggcagctgggacagagcagtgccatgggggtgggcacaggagcc
acgggtcccagctgtgatctcagagtggagtgcagtctggacatcggggt
gccgggaaagctcatagagtgtccaggagagcgtattggatacctgaggg
aacaggtgagatcatctgagctgttagacatggggaccccagtgaagggg
ggtagcatagggagggagtggtcggggaccaaggaattactaaagctaaa
ccttcatccctgaatcagaaaagtggccctagagttctcgggatgggggg
tagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_126325222_126326022
seq2: B6Ng01-201L01.b_44_847

seq1  GAATTCCCACTTTGCAAAATCACAAAAAGTCCGTAGACAAGGTCCTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACTTTGCAAAATCACAAAAAGTCCGTAGACAAGGTCCTGAAT  50

seq1  GATCTTGGTTAATTAAATTGAAAACAAGTTTCAAGGAGCTGGAGAGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTGGTTAATTAAATTGAAAACAAGTTTCAAGGAGCTGGAGAGATGG  100

seq1  CTCAGTGGTTAAGAGAGCTGCCTGCTGTTCCAAAGGACCCAAGTTTAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGGTTAAGAGAGCTGCCTGCTGTTCCAAAGGACCCAAGTTTAATC  150

seq1  TCCAATGGCCATGGTGGGCAGCCCACAACACGTGTAACTCCAGCTCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATGGCCATGGTGGGCAGCCCACAACACGTGTAACTCCAGCTCTGGG  200

seq1  GATCTGATGCCCTCTTCTGGCCTCCAAAGGCATCTACACTCATATGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGATGCCCTCTTCTGGCCTCCAAAGGCATCTACACTCATATGCACA  250

seq1  TGCCCACACACAGTCACAAATACATGTAACCAAAATAAAACCTATCTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACACACAGTCACAAATACATGTAACCAAAATAAAACCTATCTTTT  300

seq1  TAAAAAAATAAAATATACTTCACTTCCACACCTCTCCTTCATAATTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAATAAAATATACTTCACTTCCACACCTCTCCTTCATAATTTTTC  350

seq1  AGCTGACTGGTGATAGATTAACTTTTTGCTACTTATCCTGAGGCAACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACTGGTGATAGATTAACTTTTTGCTACTTATCCTGAGGCAACAGG  400

seq1  AAACTATTCACAGACACTCAGACTTAAAAGGTGCCTCTGGTTTTAGGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTCACAGACACTCAGACTTAAAAGGTGCCTCTGGTTTTAGGCAG  450

seq1  AAAGAAAAATTAAACATAATCTTTTCATAGGTCTCAGTTTTGCTATGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAATTAAACATAATCTTTTCATAGGTCTCAGTTTTGCTATGAGA  500

seq1  ATAACTTGTCTAATATCTTAAATCTGTTGATCTTAAAACTTCCATGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTGTCTAATATCTTAAATCTGTTGATCTTAAAACTTCCATGTTTT  550

seq1  AAGAAACGTAAGGACCCCGCCATTTCAATGCCTAGAGGGCTTTTAAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACGTAAGGACCCCGCCATTTCAATGCCTAGAGGGCTTTTAAAATC  600

seq1  CTTATTTCTCTCTTTTCCTAACTAAAACTCAAAAGAATATCCATTAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTCTCTCTTTTCCTAACTAAAACTCAAAAGAATATCCATTAAAGA  650

seq1  TAACTGTGGTGGTTTGAATAAGCTTGGCCCACTGTTAGGAGGCGTGGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTGGTGGTTTGAATAAGCTTGGCCCACTGTTAGGAGGCGTGGCCT  700

seq1  TGTTGGAGTGGGTGTGTCTCTGTGGGGTGGGCTTTAAGACCTTCAT-CCT  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGTTGGAGTGGGTGTGTCTCTGTGGGGTGGGCTTTAAGACCTTCATCCCT  750

seq1  AGCTGCCTGGAAGTCAATTTTCCACTAGCAG-CCTTAGGAACAAGA-GGT  797
      ||||||||||||||||||||||||||||||| |||||||||||||| |||
seq2  AGCTGCCTGGAAGTCAATTTTCCACTAGCAGCCCTTAGGAACAAGAGGGT  800

seq1  GGGG  801
      ||||
seq2  GGGG  804

seq1: chr10_126487573_126488132
seq2: B6Ng01-201L01.g_66_625 (reverse)

seq1  CCTACCCCCCATCCCGAGAACTCTAGGGCCACTTTTCTGATTCAGGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCCCCCATCCCGAGAACTCTAGGGCCACTTTTCTGATTCAGGGATG  50

seq1  AAGGTTTAGCTTTAGTAATTCCTTGGTCCCCGACCACTCCCTCCCTATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTAGCTTTAGTAATTCCTTGGTCCCCGACCACTCCCTCCCTATGC  100

seq1  TACCCCCCTTCACTGGGGTCCCCATGTCTAACAGCTCAGATGATCTCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCCTTCACTGGGGTCCCCATGTCTAACAGCTCAGATGATCTCACC  150

seq1  TGTTCCCTCAGGTATCCAATACGCTCTCCTGGACACTCTATGAGCTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCTCAGGTATCCAATACGCTCTCCTGGACACTCTATGAGCTTTCC  200

seq1  CGGCACCCCGATGTCCAGACTGCACTCCACTCTGAGATCACAGCTGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCACCCCGATGTCCAGACTGCACTCCACTCTGAGATCACAGCTGGGAC  250

seq1  CCGTGGCTCCTGTGCCCACCCCCATGGCACTGCTCTGTCCCAGCTGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGCTCCTGTGCCCACCCCCATGGCACTGCTCTGTCCCAGCTGCCCC  300

seq1  TGTTAAAGGCTGTGATCAAAGAAGTGTTGAGGTGATGGGGGAAGGAAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAGGCTGTGATCAAAGAAGTGTTGAGGTGATGGGGGAAGGAAAGC  350

seq1  AGGAAATAGATAAAATGCTAGCGGGGAGCAGAGGAAGCTGGCAGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAGATAAAATGCTAGCGGGGAGCAGAGGAAGCTGGCAGTGTGTG  400

seq1  GAAGGGGGTGGGGGGAGGGAGGAGAGAAAACTGGCCCCCTACTCCTGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGGTGGGGGGAGGGAGGAGAGAAAACTGGCCCCCTACTCCTGCAT  450

seq1  TTGGAAGCTGGAGACAAGGGGACTGGAGGCGCTGTGTTCCCCAGCCTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGCTGGAGACAAGGGGACTGGAGGCGCTGTGTTCCCCAGCCTCAC  500

seq1  CCTGCTGAATCCATTTTCTGTTTCATGACCTAGATTGTACCCTGTGGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGAATCCATTTTCTGTTTCATGACCTAGATTGTACCCTGTGGTAC  550

seq1  CTGGGAATTC  560
      ||||||||||
seq2  CTGGGAATTC  560