BAC Information

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BAC

Clone NameB6Ng01-201M16
Chromosome10 (Build37)
Map Location 47,335,344 - 47,336,471
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041632, LOC668252, LOC100042387
Downstream geneLOC100041663, LOC100042398
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201M16.bB6Ng01-201M16.g
ACCGA022464GA022465
length1,1341,088
definitionB6Ng01-201M16.b B6Ng01-201M16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaccacatttaaaagtcattaatcattaacaaattgccttca
tttcagacatgcagagatgtttaaacatgattaagacaataaatgtagtt
taccacaaatgtggactcaaggacagaaaaatcacatggcaatatctatt
gatccataaaaggtctttgacagaagcaccccacagcaaagtaaaggtta
taaatgataaaagaaagtcagtatcatattaaattgagaatagttcaaat
gaatccaattcatagcagagagaagatatgactatactctctctccagtt
ttcctcatatagtgcttgaattctactctagtatcatatagagtataaat
gctgcatttcttcacaattctgtttgtctaatatgctagaaaagtaggct
gacataattccatgtgtggatagatctcacattttacactttaaatttta
gagattgtatccgcaggaggttctctaggcacctagagtgaaaacataat
ctctcaataaaaatgtattatttttgttcgttttaaaagagaaaataaat
ctacactttgtatatataatgtactcaaactatgtgccaaattacagaaa
ctgctctataggatatctcaattctgacaacttgttttcactgacagtta
ttctttgtagctatctctgattaattatagggtaggttgatcccttctgg
ccttctccagtgggttagcatctgttccagtaagttagatctaatctcat
atggataagataaatgacatatgtcaaggagttagtgccagtaaagaatt
atatgactaattttaagatataagaagttcagaagggagaaacttttagg
ttaaatataactgaaatctattctgttcatttcatggtgatgttttagag
tatcaaaaatatttttccagttactttggttaaaatatgttctcatatag
aatgaaaacagggaaaaattatcggttataaaccttcacagaaacacagg
aaaacatttaagaaatgtaggtttggaaattagggacatattcaccagga
atttttatataattatctggagataaagttagaacatgtccattatttgg
cttaaggaaaatatcaggtatgttcatggcagct

gaattccaatgaccagtccaacttggtattcatctcaaggggaagctcca
aggcatgatactgcctgatactagtactgatgctatggtgtgcttattga
aagagaagtatgactgccctatgagattctcaacaagcagctgactgaga
caaaagtagatgcttgcaccaaaccagtgatctgaagccagggaccactg
tggcttaattggggaaatgctggaagaagttgaagtgtatagagacctga
taggaagaccagcagtctcgaccaacctagacttccaagatctcttagtc
actgagccaccaaccaggcagcatgcagaagttggtcagagggctctgac
agatataaagtagagaactgactattctggattcaatgagagcagatgca
cctaactcttgaaagacttgaggtcccagggaattaggagctatggcagg
gtgtggaggggtaaggtgaggacattctctggaggcatgggaggaggaat
aggataaggaactgtcagagtggagaatgggagggggataagggctggac
tacaaataaaaattattaaatataataaaaatattgaagcaagaaaagaa
gttaaagtatagctgttttgagataatagcatacaagagcaaattgaaac
ttttaccagagaactgtgagaaagatatcagaaaaacaatagctacaaat
aacaaaatatgttggcctaactcttaccaagcaagtgatatcctgtatga
aaataacttcaagactttgaagaatttaaattgaagcaattatcagaaaa
atggaaaaaactcctatgatcatagattcaatgaaaagattcttaattgc
tattcttgttatcattaagaatgcttagcataatcctcatgaagagaagc
ttcttttcagcaactgatggaaacaaatgaagatgaatataggcaaagct
ttcaggacatcctgtaaatgagggcagggagttgtatagcccataggggt
ctaatgtacaccacaggaaaactcacagctcactggggcttcagaccaat
ctggcaactaggaaacccggaatgggcttatactatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_47335344_47336471
seq2: B6Ng01-201M16.b_48_1181

seq1  GAATTCAAGACCACATTTAAAAGTCATTAATCATTAACAAATTGCCTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACCACATTTAAAAGTCATTAATCATTAACAAATTGCCTTCA  50

seq1  TTTCAGACATGCAGAGATGTTTAAACATGATTAAGACAATAAATGTAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGACATGCAGAGATGTTTAAACATGATTAAGACAATAAATGTAGTT  100

seq1  TACCACAAATGTGGACTCAAGGACAGAAAAATCACATGGCAATATCTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACAAATGTGGACTCAAGGACAGAAAAATCACATGGCAATATCTATT  150

seq1  GATCCATAAAAGGTCTTTGACAGAAGCACCCCACAGCAAAGTAAAGGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCATAAAAGGTCTTTGACAGAAGCACCCCACAGCAAAGTAAAGGTTA  200

seq1  TAAATGATAAAAGAAAGTCAGTATCATATTAAATTGAGAATAGTTCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGATAAAAGAAAGTCAGTATCATATTAAATTGAGAATAGTTCAAAT  250

seq1  GAATCCAATTCATAGCAGAGAGAAGATATGACTATACTCTCTCTCCAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAATTCATAGCAGAGAGAAGATATGACTATACTCTCTCTCCAGTT  300

seq1  TTCCTCATATAGTGCTTGAATTCTACTCTAGTATCATATAGAGTATAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATATAGTGCTTGAATTCTACTCTAGTATCATATAGAGTATAAAT  350

seq1  GCTGCATTTCTTCACAATTCTGTTTGTCTAATATGCTAGAAAAGTAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATTTCTTCACAATTCTGTTTGTCTAATATGCTAGAAAAGTAGGCT  400

seq1  GACATAATTCCATGTGTGGATAGATCTCACATTTTACACTTTAAATTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAATTCCATGTGTGGATAGATCTCACATTTTACACTTTAAATTTTA  450

seq1  GAGATTGTATCCGCAGGAGGTTCTCTAGGCACCTAGAGTGAAAACATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGTATCCGCAGGAGGTTCTCTAGGCACCTAGAGTGAAAACATAAT  500

seq1  CTCTCAATAAAAATGTATTATTTTTGTTCGTTTTAAAAGAGAAAATAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAATAAAAATGTATTATTTTTGTTCGTTTTAAAAGAGAAAATAAAT  550

seq1  CTACACTTTGTATATATAATGTACTCAAACTATGTGCCAAATTACAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTTTGTATATATAATGTACTCAAACTATGTGCCAAATTACAGAAA  600

seq1  CTGCTCTATAGGATATCTCAATTCTGACAACTTGTTTTCACTGACAGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTATAGGATATCTCAATTCTGACAACTTGTTTTCACTGACAGTTA  650

seq1  TTCTTTGTAGCTATCTCTGATTAATTATAGGGTAGGTTGATCCCTTCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGTAGCTATCTCTGATTAATTATAGGGTAGGTTGATCCCTTCTGG  700

seq1  CCTTCTCCAGTGGGTTAGCATCTGTTCCAGTAAGTTAGATCTAATCTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCAGTGGGTTAGCATCTGTTCCAGTAAGTTAGATCTAATCTCAT  750

seq1  ATGGATAAGATAAATGACATATGTCAAGGAGTTAGTGCCAGTAAAGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAAGATAAATGACATATGTCAAGGAGTTAGTGCCAGTAAAGAATT  800

seq1  ATATGACTAATTTTAAGATATAAGAAGTTCAGAA-GGAGAAACTTTTAGG  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATATGACTAATTTTAAGATATAAGAAGTTCAGAAGGGAGAAACTTTTAGG  850

seq1  TTAAATATAACTGAAATCTATTCTGTTCATTTCATGGTGATGTTTTAGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATAACTGAAATCTATTCTGTTCATTTCATGGTGATGTTTTAGAG  900

seq1  TATCAAAAATATTTTTCCAGTTACTTT-GTTAAAATATGTTCTCATATAG  948
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TATCAAAAATATTTTTCCAGTTACTTTGGTTAAAATATGTTCTCATATAG  950

seq1  AATGAAAACA-GGAAAAATTATC-GTTATAAACCTTCACAGAAACACAAG  996
      |||||||||| |||||||||||| ||||||||||||||||||||||| ||
seq2  AATGAAAACAGGGAAAAATTATCGGTTATAAACCTTCACAGAAACAC-AG  999

seq1  AAAAACATTTAAAGAAATGTA-GTTTGAAAATTAAGGACATATTCAC--A  1043
       ||||||||| |||||||||| ||||| |||||| ||||||||||||   
seq2  GAAAACATTT-AAGAAATGTAGGTTTGGAAATTAGGGACATATTCACCAG  1048

seq1  GAAATTTTATAT-ATTATCT-GAGATAAAATTTAGAACATGTCCAATTAT  1091
      ||| |||||||| ||||||| ||||| ||| ||||||||||||| |||||
seq2  GAATTTTTATATAATTATCTGGAGAT-AAAGTTAGAACATGTCC-ATTAT  1096

seq1  TT-GCTTAAAGAAAATATCAAGTATGTTCATGGCAGCT  1128
      || |||||| |||||||||| |||||||||||||||||
seq2  TTGGCTTAAGGAAAATATCAGGTATGTTCATGGCAGCT  1134


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