BAC Information

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BAC

Clone NameB6Ng01-202A01
Chromosome10 (Build37)
Map Location 107,318,677 - 107,467,251
singlet/doubletdoublet
Overlap geneEG628870
Upstream genePpfia2, 8430416H19Rik, Lin7a, Myf5, Myf6, Ptprq
Downstream genePpp1r12a, Pawr, EG667814, Syt1, EG368203
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202A01.bB6Ng01-202A01.g
ACCGA022617GA022618
length992774
definitionB6Ng01-202A01.b B6Ng01-202A01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,466,711 - 107,467,251)(107,318,677 - 107,319,445)
sequence
gaattcattgtttaatagctgagtagtactccactgtgtaaatgtaccac
attttctgtatccattcctttgttgagggacatctgggttctttccagct
tctggctattataaataaggatgctatgaacatagtggagcatgtgtcct
tgttacatcttggagcatattctgcatatacacccaggagtggtatagct
aggtcctcaggtagtactatgtccaattttctgaggaaccaccaaactga
tttccagagtggttgtaccagcttgcaatcccaccagtaatggaggagtg
ttcctctttctccacatcctcgccagcatctgctgtcacctgagtttttt
atcttagccattctgactgttgtgagatgaaatctcagggttgttttgat
ttgcatttccttgatgactaaggatgttgaacattcctttaggtgcttct
cagccattcagtattcctcagttgagaattctttgtttggctctgtaccc
catttttaaaaatagggttatttggttctctggtgtctaacttcttgagt
tctttgtagttaatggatattcgccctctgtcagatgtatgattagtaaa
gatcttttcccaatttgttggttgcaattttgccctattgacagtgtcct
ttgccttacagatgctttgcagttttatgtggtcccatttgtcaactctt
gattttagagcgtaagctattggtgttctgtttcaagaaatttccctctg
tgcccatgtgctcgaggctcttcctcactttcttttctattagtttcagt
gtatctggttttatttacaaagctcagtgcaaatagatcaaggacctcca
catgaaaccagatatactgagcgagccttggcccatttccacctcggata
aatagaattatggaaccatacggtgtatatttgacctctgggttgtcctt
aaagcagtaaaaaaaaagcttcatctttaaactttattattt
gaattctgagttctgggacaaaattgatttcgtttttgttttgtaaaata
tatggcttgaaaatacaaacatactgcatgctggaaagtcatccctccag
tcttgaatggggaagccggcgtgggaacaggctctagcgtactctgtggc
tgctcgacagtaagtttcatcgtcatcagttctagaaagaaagaaaaaga
aaaggcagagcctagtcccatgggaatcagacagaatgctgccttggaac
cactgagtcccaaaagcaatgggggtttggaaaatacactgatattagct
gatgtcagaatgtgtgtcttccatggcatccctcacaagagacaagaaat
ttcaaaacacatatacaagagatcctaaatgaggacacctacttaaattt
agtataatgtaatttagcggaacacctttatcacagtctgtccatagttt
tattactttctctatgggtcaagtaaaaactataatgaaaaatatttata
tttaaatttttttttaaaattgcatgtatttttatttccttaccaaatat
cctagaccttttagaatttaataatagttaaattcagataaaaaatgtaa
atgaagttaaaaacataaatttatatttctacaaaaatatcaagggtgaa
cattttttttccaaacacctcatactgagttgccccatagtctgtggccc
tcctaaggattacagtggctgttcttgccataacagtccaaaatattttt
tgagagacttggtaaatatacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_107466711_107467251
seq2: B6Ng01-202A01.b_498_1038 (reverse)

seq1  AAATAATAAAGTTTAAAGATGAGCTTTTTTTTTTACTGCTTTAAGGACAA  50
      ||||||||||||||||||||||   |||||||||||||||||||||||||
seq2  AAATAATAAAGTTTAAAGATGAAGCTTTTTTTTTACTGCTTTAAGGACAA  50

seq1  CCCAGAGGTCAAATATACACCGTATGGTTCCATAATTCTATTTATCCGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGGTCAAATATACACCGTATGGTTCCATAATTCTATTTATCCGAG  100

seq1  GTTGAAAATAGGCCAA-GCTCACTCAGTATATCTGGTTTCATGTGGAGGT  149
      | || |||| |||||| |||| ||||||||||||||||||||||||||||
seq2  G-TGGAAATGGGCCAAGGCTCGCTCAGTATATCTGGTTTCATGTGGAGGT  149

seq1  CCTTGATCTATTTGCACTTGAGCTTTGTAAATAAAACCAGATACACTGAA  199
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCTTGATCTATTTGCAC-TGAGCTTTGTAAATAAAACCAGATACACTGAA  198

seq1  ACTAATAGAAAAGAAAGTGAGGAAGAGCCTCGAGCACATGGGCACAGAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAGAAAAGAAAGTGAGGAAGAGCCTCGAGCACATGGGCACAGAGG  248

seq1  GAAATTTCTTG-AACAGAACACCAATAGCTTACGCTCTAAAATCAAGAGT  298
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTCTTGAAACAGAACACCAATAGCTTACGCTCTAAAATCAAGAGT  298

seq1  TGACAAATGGGACCACATAAAACTGCAAAGCATCTGTAAGGCAAAGGACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAATGGGACCACATAAAACTGCAAAGCATCTGTAAGGCAAAGGACA  348

seq1  CTGTCAATAGGGCAAAATTGCAACCAACAAATTGGGAAAAGATCTTTACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAATAGGGCAAAATTGCAACCAACAAATTGGGAAAAGATCTTTACT  398

seq1  AATCATACATCTGACAGAGGGCGAATATCCATTAACTACAAAGAACTCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATACATCTGACAGAGGGCGAATATCCATTAACTACAAAGAACTCAA  448

seq1  GAAGTTAGACACCAGAGAACCAAATAACCCTATTTTTAAAAATGGGGTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTAGACACCAGAGAACCAAATAACCCTATTTTTAAAAATGGGGTAC  498

seq1  AGAGCCAAACAAAGAATTCTCAACTGAGGAATACTGAATGGCT  541
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAAACAAAGAATTCTCAACTGAGGAATACTGAATGGCT  541

seq1: chr10_107318677_107319445
seq2: B6Ng01-202A01.g_68_841

seq1  GAATTCTGAGTTCTGGGACAAAATTGATTTCGTTTTTGTTTTGTAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGTTCTGGGACAAAATTGATTTCGTTTTTGTTTTGTAAAATA  50

seq1  TATGGCTTGAAAATACAAACATACTGCATGCTGGAAAGTCATCCCTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTTGAAAATACAAACATACTGCATGCTGGAAAGTCATCCCTCCAG  100

seq1  TCTTGAATGGGGAAGCCGGCGTGGGAACAGGCTCTAGCGTACTCTGTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAATGGGGAAGCCGGCGTGGGAACAGGCTCTAGCGTACTCTGTGGC  150

seq1  TGCTCGACAGTAAGTTTCATCGTCATCAGTTCTAGAAAGAAAGAAAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCGACAGTAAGTTTCATCGTCATCAGTTCTAGAAAGAAAGAAAAAGA  200

seq1  AAAGGCAGAGCCTAGTCCCATGGGAATCAGACAGAATGCTGCCTTGGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGAGCCTAGTCCCATGGGAATCAGACAGAATGCTGCCTTGGAAC  250

seq1  CACTGAGTCCCAAAAGCAATGGGGGTTTGGAAAATACACTGATATTAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGTCCCAAAAGCAATGGGGGTTTGGAAAATACACTGATATTAGCT  300

seq1  GATGTCAGAATGTGTGTCTTCCATGGCATCCCTCACAAGAGACAAGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAGAATGTGTGTCTTCCATGGCATCCCTCACAAGAGACAAGAAAT  350

seq1  TTCAAAACACATATACAAGAGATCCTAAATGAGGACACCTACTTAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACACATATACAAGAGATCCTAAATGAGGACACCTACTTAAATTT  400

seq1  AGTATAATGTAATTTAGCGGAACACCTTTATCACAGTCTGTCCATAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAATGTAATTTAGCGGAACACCTTTATCACAGTCTGTCCATAGTTT  450

seq1  TATTACTTTCTCTATGGGTCAAGTAAAAACTATAATGAAAAATATTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTTTCTCTATGGGTCAAGTAAAAACTATAATGAAAAATATTTATA  500

seq1  TTTAAATTTTTTTTTAAAATTGCATGTATTTTTATTTCCTTACCAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTTTTTTTAAAATTGCATGTATTTTTATTTCCTTACCAAATAT  550

seq1  CCTAGACCTTTTAGAATTTAATAATAGTTAAATTCAGATAAAAAATGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACCTTTTAGAATTTAATAATAGTTAAATTCAGATAAAAAATGTAA  600

seq1  ATGAAGTT-AAAACATAAATTTATATTTCTACAAAAATATCAAGGGTGAA  649
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTTAAAAACATAAATTTATATTTCTACAAAAATATCAAGGGTGAA  650

seq1  CA--TTTTTTCCAAACACCTCATACTGAGTTGCCCCATAGTCTGTGGCCC  697
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTTCCAAACACCTCATACTGAGTTGCCCCATAGTCTGTGGCCC  700

seq1  TCCTAAGGATTACAGTGGCTGTTCTTGCCATAACAGTCCAAAATA-TTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCTAAGGATTACAGTGGCTGTTCTTGCCATAACAGTCCAAAATATTTTT  750

seq1  TGAGAGACTTGGTAAATA-ACATT  769
      |||||||||||||||||| |||||
seq2  TGAGAGACTTGGTAAATATACATT  774