BAC Information

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BAC

Clone NameB6Ng01-202F11
Chromosome10 (Build37)
Map Location 106,010,308 - 106,194,632
singlet/doubletdoublet
Overlap genePpfia2
Upstream geneTmtc2, BC067068, Ccdc59, EG667758, EG639162, Olfr1556-ps1
Downstream gene8430416H19Rik, Lin7a, Myf5, Myf6, Ptprq
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202F11.bB6Ng01-202F11.g
ACCGA022857GA022858
length1,1631,003
definitionB6Ng01-202F11.b B6Ng01-202F11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,193,454 - 106,194,632)(106,010,308 - 106,011,231)
sequence
gaattctttcatccatcaggttattgccccaaactcttaaatttaaaata
taatctaggccatttgtgttttagcttaagtctttaatgtcttctcattt
ggccaaaacaaaattcagagtccttacacatcctaagtgaaatctaagta
actctgagctcatctctcttccttacacatcgcccgcattggcttagttg
aagcatttgtcagtggagctttgctcagctttgtaaaatagtggatatgt
gtctgttcatgtgcattgtaatatagtgggtatgcatcggttcaagtgca
tcaagttttctttttcttttttttttttttttactaagctctttactttt
tgtaaacctaaaatatccctttcagttacctgtatggccttatcagccca
caatccttactttttttcagtcaagagtcacttatctatacacttctcca
actccttatgctgcctctttctttccccacttggcatttgcctctaacta
acattcctatccaggtttacggtatttgttaactacctcccaaatgttaa
tatatcaataaagaaaggaatattatctctactttgctaacttctgattt
gccaatgctcacaagattatacaaagtctatgatcatccaaattgattga
acagatagaaaaaaaaacagtctattaaagcagaaatttatatatactta
agagaactgggcatttgggatatgcattctggatagatttcactacagta
agtaaatgattaatttcacaagaaagtaagatatcttccatggtatatga
aggaaagatagttatggaaacaatcaatagctcatgatttcatcaaatgg
tgggaatgtagaaacaagacttttgatttgagtcactgctgttataggat
gctttggaaagcatgaagaatataacacattgaagtaagccttatgcgtg
aaggaaaataagagagagaaaagatgaagagataatgtccaatgatctat
aggtagcatcattcagaatcacacattatttcaagaaagacaatagttgg
gtattaagagatgatataaatatagcatattacatttctatgccagacag
gtgtctttctgtggaagtcttcatatactaaaaaatgggaagtagaaatt
agcagagactttg
gaattctttgtttagctctgtaccccgtttttttaacagagtaatttgtt
tctcttgagcctaacatccactggagcacaggacatctatgtaggggaca
cacactaaagaaataatgattctcctttcttgaaactacctatatacaag
agctcttgaataccaaggcctgaggacatttctctcatctaaactggaat
gttggctggtgtgatttttgtagatcttgtgcaagtaaccgaagttcatg
atttcaatagctatgacatggtcagtagatttgaacatgtaattggtagt
tgcattttacttattgtggatttgccaatattgaaattttatttccctcc
tcctggaaatgatttctggtgttaaaaggatttaactcattattataaag
ggatatatttagtattaagagtgtaatcaattctaagaaggggcaaagtg
tccacactttggtcttctttttcttgagtttcatgtgctttgtatcttgt
atcttgggtattctaagtttctgagcaaatatccacatatcagtgagtac
atatcatgtgagctcttttgtgattgggttacctcactcaagatgatgcc
ctccaggtcaatccatttgcctaggaatttcataaattcactctttttaa
tagctgagtagtattccattgtgtaaatgtacgacattttctgtatccat
tcctctgttgaggggcatctgggttctttccagcttctggcaattataaa
taaggctgctatgaacatagtagagcatgtgtctttcttaccagttggaa
catcttctggatatatgcccaggagagttattgcgggatcctctggtagt
actatgtccaattttctgaggaactgccagactgattttcagagtggttg
tacaagcttgcaatcccaccagcaatagagaagtgttcctctttctcaca
tcctcacagcatctgctgtcactgaatttttttatcttagccattctgac
tgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_106193454_106194632
seq2: B6Ng01-202F11.b_46_1208 (reverse)

seq1  CAAATGTCTCTTTGCTAATTTCTACTTCATTTTTTTTTTAGTATTATTGA  50
      |||| |||||  ||||||||||||||||     |||||||||||   |||
seq2  CAAA-GTCTC--TGCTAATTTCTACTTC--CCATTTTTTAGTAT--ATGA  43

seq1  AGAATTTCCACAG-AAGACACCTGTTCTGCATAAGAAATTGTAATATGCT  99
      || | |||||||| |||||||||||   |||| ||||| |||||||||||
seq2  AG-ACTTCCACAGAAAGACACCTGTCTGGCAT-AGAAA-TGTAATATGCT  90

seq1  ATAATTTAATATCATCTCTT-ATACCAAACTATTGTCTTTCTTTGAAATA  148
      |||  || |||||||||||| ||||| |||||||||||||| ||||||||
seq2  ATA--TTTATATCATCTCTTAATACCCAACTATTGTCTTTC-TTGAAATA  137

seq1  ATGTGTGAATTCTGAATGATGCTACCTATAGAATCATTGGACATTTTATC  198
      ||||||| ||||||||||||||||||||||| |||||||||||  |||||
seq2  ATGTGTG-ATTCTGAATGATGCTACCTATAG-ATCATTGGACA--TTATC  183

seq1  TCTTCATCTTTTCTCTCTCTTATTTTTCCTTCACGCATAAGGCTTACTTC  248
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCTTCATCTTTTCTCTCTCTTA-TTTTCCTTCACGCATAAGGCTTACTTC  232

seq1  AATGTGTTATATTCTTCATGCTTTCCAAAGCATCCTATAACAGCAGTGAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTATATTCTTCATGCTTTCCAAAGCATCCTATAACAGCAGTGAC  282

seq1  TCAAATCAAAAGTCTTGTTTCTACATTCCCACCATTTGATGAAATCATGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCAAAAGTCTTGTTTCTACATTCCCACCATTTGATGAAATCATGA  332

seq1  GCTATTGATTGTTTCCATAACTATCTTTCCTTCATATACCATGGAAGATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTGATTGTTTCCATAACTATCTTTCCTTCATATACCATGGAAGATA  382

seq1  TCTTACTTTCTTGTGAAATTAATCATTTACTTACTGTAGTGAAATCTATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTTTCTTGTGAAATTAATCATTTACTTACTGTAGTGAAATCTATC  432

seq1  CAGAATGCATATCCCAAATGCCCAGTTCTCTTAAGTATATATAAATTTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGCATATCCCAAATGCCCAGTTCTCTTAAGTATATATAAATTTCT  482

seq1  GCTTTAATAGACTGTTTTTTTTTCTATCTGTTCAATCAATTTGGATGATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAATAGACTGTTTTTTTTTCTATCTGTTCAATCAATTTGGATGATC  532

seq1  ATAGACTTTGTATAATCTTGTGAGCATTGGCAAATCAGAAGTTAGCAAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACTTTGTATAATCTTGTGAGCATTGGCAAATCAGAAGTTAGCAAAG  582

seq1  TAGAGATAATATTCCTTTCTTTATTGATATATTAACATTTGGGAGGTAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATAATATTCCTTTCTTTATTGATATATTAACATTTGGGAGGTAGT  632

seq1  TAACAAATACCGTAAACCTGGATAGGAATGTTAGTTAGAGGCAAATGCCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAATACCGTAAACCTGGATAGGAATGTTAGTTAGAGGCAAATGCCA  682

seq1  AGTGGGGAAAGAAAGAGGCAGCATAAGGAGTTGGAGAAGTGTATAGATAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGAAAGAAAGAGGCAGCATAAGGAGTTGGAGAAGTGTATAGATAA  732

seq1  GTGACTCTTGACTGAAAAAAAGTAAGGATTGTGGGCTGATAAGGCCATAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCTTGACTGAAAAAAAGTAAGGATTGTGGGCTGATAAGGCCATAC  782

seq1  AGGTAACTGAAAGGGATATTTTAGGTTTACAAAAAGTAAAGAGCTTAGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAACTGAAAGGGATATTTTAGGTTTACAAAAAGTAAAGAGCTTAGTA  832

seq1  AAAAAAAAAAAAAAAGAAAAAGAAAACTTGATGCACTTGAACCGATGCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAGAAAAAGAAAACTTGATGCACTTGAACCGATGCAT  882

seq1  ACCCACTATATTACAATGCACATGAACAGACACATATCCACTATTTTACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTATATTACAATGCACATGAACAGACACATATCCACTATTTTACA  932

seq1  AAGCTGAGCAAAGCTCCACTGACAAATGCTTCAACTAAGCCAATGCGGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAGCAAAGCTCCACTGACAAATGCTTCAACTAAGCCAATGCGGGC  982

seq1  GATGTGTAAGGAAGAGAGATGAGCTCAGAGTTACTTAGATTTCACTTAGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTAAGGAAGAGAGATGAGCTCAGAGTTACTTAGATTTCACTTAGG  1032

seq1  ATGTGTAAGGACTCTGAATTTTGTTTTGGCCAAATGAGAAGACATTAAAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAAGGACTCTGAATTTTGTTTTGGCCAAATGAGAAGACATTAAAG  1082

seq1  ACTTAAGCTAAAACACAAATGGCCTAGATTATATTTTAAATTTAAGAGTT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGCTAAAACACAAATGGCCTAGATTATATTTTAAATTTAAGAGTT  1132

seq1  TGGGGCAATAACCTGATGGATGAAAGAATTC  1179
      |||||||||||||||||||||||||||||||
seq2  TGGGGCAATAACCTGATGGATGAAAGAATTC  1163

seq1: chr10_106010308_106011231
seq2: B6Ng01-202F11.g_66_989

seq1  GAATTCTTTGTTTAGCTCTGTACCCCGTTTTTTTAACAGAGTAATTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCCGTTTTTTTAACAGAGTAATTTGTT  50

seq1  TCTCTTGAGCCTAACATCCACTGGAGCACAGGACATCTATGTAGGGGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGAGCCTAACATCCACTGGAGCACAGGACATCTATGTAGGGGACA  100

seq1  CACACTAAAGAAATAATGATTCTCCTTTCTTGAAACTACCTATATACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTAAAGAAATAATGATTCTCCTTTCTTGAAACTACCTATATACAAG  150

seq1  AGCTCTTGAATACCAAGGCCTGAGGACATTTCTCTCATCTAAACTGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTGAATACCAAGGCCTGAGGACATTTCTCTCATCTAAACTGGAAT  200

seq1  GTTGGCTGGTGTGATTTTTGTAGATCTTGTGCAAGTAACCGAAGTTCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTGGTGTGATTTTTGTAGATCTTGTGCAAGTAACCGAAGTTCATG  250

seq1  ATTTCAATAGCTATGACATGGTCAGTAGATTTGAACATGTAATTGGTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAATAGCTATGACATGGTCAGTAGATTTGAACATGTAATTGGTAGT  300

seq1  TGCATTTTACTTATTGTGGATTTGCCAATATTGAAATTTTATTTCCCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTACTTATTGTGGATTTGCCAATATTGAAATTTTATTTCCCTCC  350

seq1  TCCTGGAAATGATTTCTGGTGTTAAAAGGATTTAACTCATTATTATAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAAATGATTTCTGGTGTTAAAAGGATTTAACTCATTATTATAAAG  400

seq1  GGATATATTTAGTATTAAGAGTGTAATCAATTCTAAGAAGGGGCAAAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATATTTAGTATTAAGAGTGTAATCAATTCTAAGAAGGGGCAAAGTG  450

seq1  TCCACACTTTGGTCTTCTTTTTCTTGAGTTTCATGTGCTTTGTATCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTTTGGTCTTCTTTTTCTTGAGTTTCATGTGCTTTGTATCTTGT  500

seq1  ATCTTGGGTATTCTAAGTTTCTGAGCAAATATCCACATATCAGTGAGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGTATTCTAAGTTTCTGAGCAAATATCCACATATCAGTGAGTAC  550

seq1  ATATCATGTGAGCTCTTTTGTGATTGGGTTACCTCACTCAAGATGATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATGTGAGCTCTTTTGTGATTGGGTTACCTCACTCAAGATGATGCC  600

seq1  CTCCAGGTCAATCCATTTGCCTAGGAATTTCATAAATTCACTCTTTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGTCAATCCATTTGCCTAGGAATTTCATAAATTCACTCTTTTTAA  650

seq1  TAGCTGAGTAGTATTCCATTGTGTAAATGTACGACATTTTCTGTATCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGAGTAGTATTCCATTGTGTAAATGTACGACATTTTCTGTATCCAT  700

seq1  TCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAATTATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCAATTATAAA  750

seq1  TAAGGCTGCTATGAACATAGTAGAGCATGTGTCTTTCTTACCAGTTGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCTGCTATGAACATAGTAGAGCATGTGTCTTTCTTACCAGTTGGAA  800

seq1  CATCTTCTGGATATATGCCCAGGAGAGTTATTGCGGGATCCTCTGGTAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCTGGATATATGCCCAGGAGAGTTATTGCGGGATCCTCTGGTAGT  850

seq1  ACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTTCAGAGTGGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTTCAGAGTGGTTG  900

seq1  TACAAGCTTGCAATCCCACCAGCA  924
      ||||||||||||||||||||||||
seq2  TACAAGCTTGCAATCCCACCAGCA  924