BAC Information

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BAC

Clone NameB6Ng01-204A18
Chromosome10 (Build37)
Map Location 49,196,118 - 49,197,216
singlet/doubletsinglet
Overlap geneGrik2
Upstream geneLOC546562, LOC100041689
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204A18.bB6Ng01-204A18.g
ACCGA024098GA024099
length1,1801,103
definitionB6Ng01-204A18.b B6Ng01-204A18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaatcaccctggaaatcagtttggtggttcctca
gaaagttggacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgccccaaccggtaagaaggacacatgctccactat
gttcattgcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaacttgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacgcatgaaactcaa
gaagaatgaataccaaagtgtggacacttttgccccttcttagaaatggg
aacaaaacacccatggaagtagttacagagacaaaatttggagctgtgat
gaaagaatggaccatctagtgattgccatatccagggatctatcccataa
tcagcttccaaatgctgacaccattgccatacactagcaagatttttgct
gaaaaggacccagatatagctgtctctttgtgagacttatcgccggggcc
tagcaaacacagaagtggatgatcaacagtcagctattggatgggtcatg
ttggcccctaatggaagagctagaaaagtactccaagggagcttaaaggg
catctgcaacccatatagtggaacaaactgatatgaatttaaccagcact
cctcggagcctctgtcttcttagctgcattattgtatcaaaagaatggct
ctagtccggcattcacgttgaaaagagaatgcctcttgaccttgcacctt
ataggcctcagtcacggcaacgcctatggt

gaattcatttacttcggtatttttctagcttttaaggaaccattacatat
catctagatttcagtagaaatataactattccatgatgataagttttact
ttacttaatgaatcttttaatgtgttagacatagcatgttttttttctaa
cccttaaacatgttagagtgaaaaacaaaaacaaataccaatagccacac
aaacaacaaacattcacagttgagatattccaagatttaaaaattttgca
gtggttcagactgtcttcaaaaagtaaaacctgtacacacacacacaaag
acagagtaatgatcttgaatgtacttgaatgctatggttcctctacaagt
gtataaagtttgcaacatctagtggaagtaaaaggctagtatgatggttt
gaatgagaatgggccccattgactgactcatatttaaatgctagtcacca
ggagtgtaactatatgaaaaagattagaaattggagtaagcctggtgtta
ttggagtaggtgtgccctcactggaggaaatgtgtcactgggtgtgattt
ctgagatttcaaaagctcaatcgctcctctgcctgcctgcctgcctgcct
gcctgcctgcctgcctgcctgcctgcctgcctgcctgcctgtctgtctgt
ctgtctgtctctccggtctacagatcaatatgtaatattcatctactgct
ccagtgccatgtctgcctgcatgtgggccatgttcctgccaggatgacaa
tgaattaaaactctgaaaatgtaactaaccctcaattaaatgtttttctt
ttataagagttgtcttgtttcacagtttctcctcccagcaaaataaaaag
ggactaagacaattagtaacttttgctaccagattccaaaccttgtgata
taactgggtttttgcctttgaatatctgacaattgtttataattgttggt
aaagattatattattcctcccctgcacacacattattcatacgttatgct
tacgaatatttgagaagagggatatatgacaacgattgggggaggtctca
gtctgttgagattgtgttctcttagtctatacctaggcttaacccattaa
gtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_49196118_49197216
seq2: B6Ng01-204A18.g_67_1169

seq1  GAATTCATTTACTTCGGTATTTTTCTAGCTTTTAAGGAACCATTACATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTACTTCGGTATTTTTCTAGCTTTTAAGGAACCATTACATAT  50

seq1  CATCTAGATTTCAGTAGAAATATAACTATTCCATGATGATAAGTTTTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGATTTCAGTAGAAATATAACTATTCCATGATGATAAGTTTTACT  100

seq1  TTACTTAATGAATCTTTTAATGTGTTAGACATAGCATGTTTTTTTTCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAATGAATCTTTTAATGTGTTAGACATAGCATGTTTTTTTTCTAA  150

seq1  CCCTTAAACATGTTAGAGTGAAAAACAAAAACAAATACCAATAGCCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTAAACATGTTAGAGTGAAAAACAAAAACAAATACCAATAGCCACAC  200

seq1  AAACAACAAACATTCACAGTTGAGATATTCCAAGATTTAAAAATTTTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACAAACATTCACAGTTGAGATATTCCAAGATTTAAAAATTTTGCA  250

seq1  GTGGTTCAGACTGTCTTCAAAAAGTAAAACCTGTACACACACACACAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCAGACTGTCTTCAAAAAGTAAAACCTGTACACACACACACAAAG  300

seq1  ACAGAGTAATGATCTTGAATGTACTTGAATGCTATGGTTCCTCTACAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTAATGATCTTGAATGTACTTGAATGCTATGGTTCCTCTACAAGT  350

seq1  GTATAAAGTTTGCAACATCTAGTGGAAGTAAAAGGCTAGTATGATGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAGTTTGCAACATCTAGTGGAAGTAAAAGGCTAGTATGATGGTTT  400

seq1  GAATGAGAATGGGCCCCATTGACTGACTCATATTTAAATGCTAGTCACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGAATGGGCCCCATTGACTGACTCATATTTAAATGCTAGTCACCA  450

seq1  GGAGTGTAACTATATGAAAAAGATTAGAAATTGGAGTAAGCCTGGTGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGTAACTATATGAAAAAGATTAGAAATTGGAGTAAGCCTGGTGTTA  500

seq1  TTGGAGTAGGTGTGCCCTCACTGGAGGAAATGTGTCACTGGGTGTGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTAGGTGTGCCCTCACTGGAGGAAATGTGTCACTGGGTGTGATTT  550

seq1  CTGAGATTTCAAAAGCTCAATCGCTCCTCTGCCTGCCTGCCTGCCTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTTCAAAAGCTCAATCGCTCCTCTGCCTGCCTGCCTGCCTGCCT  600

seq1  GCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGTCTGTCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGTCTGTCTGT  650

seq1  CTGTCTGTCTCTCCGGTCTACAGATCAATATGTAATATTCATCTACTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTCTCCGGTCTACAGATCAATATGTAATATTCATCTACTGCT  700

seq1  CCAGTGCCATGTCTGCCTGCATGT-GGCCATGTTCCTGCCAGGATGACAA  749
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCAGTGCCATGTCTGCCTGCATGTGGGCCATGTTCCTGCCAGGATGACAA  750

seq1  TGAATTAAAACTCTGAAAATGTAACTAACCCTCAATTAAATG-TTTTCTT  798
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGAATTAAAACTCTGAAAATGTAACTAACCCTCAATTAAATGTTTTTCTT  800

seq1  TTATAAGAGTTGTCTTG-TTCACAGTTTCTCCTCCCAGCAAAATAAAAA-  846
      ||||||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  TTATAAGAGTTGTCTTGTTTCACAGTTTCTCCTCCCAGCAAAATAAAAAG  850

seq1  GGACTAAGACAATTAGTAAC-TTTGCTACCAGATTCCAAAACCTTGTGAT  895
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  GGACTAAGACAATTAGTAACTTTTGCTACCAGATTCC-AAACCTTGTGAT  899

seq1  ATAACT-GGTTTTTGCCTTTGAATATCTGACAAATGTTTATAAATTGTTG  944
      |||||| |||||||||||||||||||||||||| ||||||| ||||||||
seq2  ATAACTGGGTTTTTGCCTTTGAATATCTGACAATTGTTTAT-AATTGTTG  948

seq1  GTAAAGATTATATTA-TCCTCCCCTGCACACACA-TATTCATACGTAAGG  992
      ||||||||||||||| |||||||||||||||||| ||||||||||| | |
seq2  GTAAAGATTATATTATTCCTCCCCTGCACACACATTATTCATACGTTATG  998

seq1  CTAAAGAAATATTGAAGAAGAGGAAATAAGGACAAAGGATTGGGGGAGGG  1042
      || | | ||||||  |||||||| |   | ||| || |||||||||| ||
seq2  CTTACG-AATATTTGAGAAGAGGGATATATGAC-AACGATTGGGGGA-GG  1045

seq1  TCTCAGTTCCTG-TGAGATTGTG-TCTCTTAGTCATAACAGAAGC-TAAC  1089
      |||||||  ||| |||||||||| ||||||||||   ||  | || ||||
seq2  TCTCAGT--CTGTTGAGATTGTGTTCTCTTAGTCTATACCTAGGCTTAAC  1093

seq1  CCATAAAGTT  1099
      |||| |||||
seq2  CCATTAAGTT  1103


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