BAC Information

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BAC

Clone NameB6Ng01-204B03
Chromosome10 (Build37)
Map Location 9,299,743 - 9,300,741
singlet/doubletsinglet
Overlap genenone
Upstream geneSash1, LOC100039173, EG666625, LOC666636
Downstream geneE130306M17Rik, LOC666658, LOC620417, Stxbp5, LOC100039238, LOC665110, 9130014G24Rik, Rab32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204B03.bB6Ng01-204B03.g
ACCGA024116GA024117
length9321,008
definitionB6Ng01-204B03.b B6Ng01-204B03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttttttcttttttcttttcc
attttttattaggtatttaactcatttacatttccaatgctataccaaaa
gtcccccatatccacccacccccactcccctgcccacccactcccccttt
ttggccctggtattcccctgtactggggcatataaagtttgcaagtccaa
tgggcctctctttccagtgttcaacatccttaatcatcagggaaatgcaa
atcaaaacaaccctgagattccacctcacaccagtcagaatggctaagat
caaaaattcaggtgacagcagatgctggcgaggatgtggagaaagaggaa
cactcctccattgttggtgggagtgcaggcttgtacaaccactctggaaa
tcagtctggcggttcctcagaaaactggacatagtactaccggaggatcc
agcaatacctctcctgggcatatacccagaagatgccccaacaggtaaga
aggacacatgctccactatgttcatagcagccttatttataatagccaga
agctggaaagaacctagatgcccctcaacagaggaatggatacagaaaat
gtggtacatctacacaatggagtactactcagctattaaaaagaatgaat
ttatgaaattcctagccaaatggatggacctggagggcatcatcctgagt
gaggtaacacattcacaaagaaactcacacaatatgtattcactgataag
tggatattagccccaagcctaggatacccaagatataagatataatttgc
taaacacatgaaactcaaggagaatgaagactgaagttgtggacactatg
cccctccttagatttgggaacaaacacccatggaaggagttacagagacg
gaggttggagctgagatgaaaggatggaccat
gaattccattaagcacgtgtcaaggggattcactaacacaagaagagaaa
aataggaacatcccaggagaagggagcaaggtgtgagggtaagagatgtt
caggatgagagaaggggccaggaggaggaaaagatgaaagggaggtggtg
gaagagtagaagaaaaccaggaatgaagaaggagaactaaggaggagaag
agcattgtgagaatgaatgtctttgtctccatcactttttttcctagctc
catcttccatggctccttcctggttggcactcatccatcatataactagc
tgtctgtgttctctgtttcctctgtcctggcatccaagggctgtgcatga
tggaggtatcaacacttgcaggtccctccctacaactcacaacacatgca
agaggcagagtgcaaattgagttaaacactttgcaatggggagactcaga
aatgcttgaagcatgggatggtggtggggacgcttgactggatttgtgag
acaaggaagatggctttgggacagggaagacagcttttagaagtctaaga
aagaaaaaaattaagtcagtgaccattagcacatgaagcaacccagaaga
acctcagaaactctactgagcagccaaaggaacagcaagcattcttatgg
tcccatgaccgtgaagacagagtatgagtgagactgctcaatgatgttaa
aagtccggatgggggagtattgcctagggaggggccaaagaggaccttat
ggaatactacatcttttctatgtgttcacttgagaattgaatgcatgagt
aagtgcatatagcatgtatagtaattttatcaaactgtgtacttatgatt
ttatactttaattattttatatatattattttttaaaagctaagcaggtt
gaaaattatacttgtaaataagtatggctaaaattgcagttaaaataagg
cagagcaggctctgcttctgattttaccaatttatatttctggaattgta
aatggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_9299743_9300741
seq2: B6Ng01-204B03.g_65_1072 (reverse)

seq1  CCAGCATTTA-AAATCCAGAAATATAAATT-GTAAAATCAGAAGCAGAGC  48
      ||| |||||| || |||||||||||||||| |||||||||||||||||||
seq2  CCACCATTTACAATTCCAGAAATATAAATTGGTAAAATCAGAAGCAGAGC  50

seq1  CTGCTCTGCCTTA-TTTAACTGC-ATTTTAG-CATACTAATTTACAAGTA  95
      ||||||||||||| ||||||||| ||||||| |||||| |||||||||||
seq2  CTGCTCTGCCTTATTTTAACTGCAATTTTAGCCATACTTATTTACAAGTA  100

seq1  T-ATTTTCAACCTGCTTAGCTTTTTAAAAATAATATATATAAA--TATTA  142
      | |||||||||||||||||||||| ||||||||||||||||||   ||||
seq2  TAATTTTCAACCTGCTTAGCTTTTAAAAAATAATATATATAAAATAATTA  150

seq1  AAGTATAAAATCATAAGTACACAGTTTGAT-AAATTACTATACATGCTAT  191
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAGTATAAAATCATAAGTACACAGTTTGATAAAATTACTATACATGCTAT  200

seq1  ATGCACTTACTCATGCATTCAATTCTCAAGTGGACACATAGAAAAGATGT  241
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATGCACTTACTCATGCATTCAATTCTCAAGTGAACACATAGAAAAGATGT  250

seq1  AGTATTCCATAAGGTCCTCTTTGGCCCCTCCCTAGGCAATACTCCCCCAT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCCATAAGGTCCTCTTTGGCCCCTCCCTAGGCAATACTCCCCCAT  300

seq1  CCGGACTTTTAACATCATTGAGCAGTCTCACTCATACTCTGTCTTCACGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGACTTTTAACATCATTGAGCAGTCTCACTCATACTCTGTCTTCACGG  350

seq1  TCATGGGACCATAAGAATGCTTGCTGTTCCTTTGGCTGCTCAGTAGAGTT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGGACCATAAGAATGCTTGCTGTTCCTTTGGCTGCTCAGTAGAGTT  400

seq1  TCTGAGGTTCTTCTGGGTTGCTTCATGTGCTAATGGTCACTGACTTAATT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGTTCTTCTGGGTTGCTTCATGTGCTAATGGTCACTGACTTAATT  450

seq1  TTTTTCTTTCTTAGACTTCTAAAAGCTGTCTTCCCTGTCCCAAAGCCATC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTCTTAGACTTCTAAAAGCTGTCTTCCCTGTCCCAAAGCCATC  500

seq1  TTCCTTGTCTCACAAATCCAGTCAAGCGTCCCCACCACCATCCCATGCTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGTCTCACAAATCCAGTCAAGCGTCCCCACCACCATCCCATGCTT  550

seq1  CAAGCATTTCTGAGTCTCCCCATTGCAAAGTGTTTAACTCAATTTGCACT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATTTCTGAGTCTCCCCATTGCAAAGTGTTTAACTCAATTTGCACT  600

seq1  CTGCCTCTTGCATGTGTTGTGAGTTGTAGGGAGGGACCTGCAAGTGTTGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTTGCATGTGTTGTGAGTTGTAGGGAGGGACCTGCAAGTGTTGA  650

seq1  TACCTCCATCATGCACAGCCCTTGGATGCCAGGACAGAGGAAACAGAGAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCATCATGCACAGCCCTTGGATGCCAGGACAGAGGAAACAGAGAA  700

seq1  CACAGACAGCTAGTTATATGATGGATGAGTGCCAACCAGGAAGGAGCCAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACAGCTAGTTATATGATGGATGAGTGCCAACCAGGAAGGAGCCAT  750

seq1  GGAAGATGGAGCTAGGAAAAAAAGTGATGGAGACAAAGACATTCATTCTC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATGGAGCTAGGAAAAAAAGTGATGGAGACAAAGACATTCATTCTC  800

seq1  ACAATGCTCTTCTCCTCCTTAGTTCTCCTTCTTCATTCCTGGTTTTCTTC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTCTTCTCCTCCTTAGTTCTCCTTCTTCATTCCTGGTTTTCTTC  850

seq1  TACTCTTCCACCACCTCCCTTTCATCTTTTCCTCCTCCTGGCCCCTTCTC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTCCACCACCTCCCTTTCATCTTTTCCTCCTCCTGGCCCCTTCTC  900

seq1  TCATCCTGAACATCTCTTACCCTCACACCTTGCTCCCTTCTCCTGGGATG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTGAACATCTCTTACCCTCACACCTTGCTCCCTTCTCCTGGGATG  950

seq1  TTCCTATTTTTCTCTTCTTGTGTTAGTGAATCCCCTTGACACGTGCTTAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATTTTTCTCTTCTTGTGTTAGTGAATCCCCTTGACACGTGCTTAA  1000

seq1  TGGAATTC  999
      ||||||||
seq2  TGGAATTC  1008