BAC Information

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BAC

Clone NameB6Ng01-204F14
Chromosome10 (Build37)
Map Location 127,136,010 - 127,254,846
singlet/doubletdoublet
Overlap geneMyo1a, Tac2, Zbtb39, Admr, Rdh1, Rdh9, Rdh16
Upstream geneLOC668336, Xrcc6bp1, LOC622567, Ctdsp2, Avil, Tsfm, Mettl1, Cyp27b1, March9, Cdk4, Tspan31, Centg1, Os9, LOC100043028, B4galnt1, LOC100043035, C78409, D10Ertd610e, Dtx3, Pip5k2c, Kif5a, Dctn2, Mbd6, LOC100043045, Ddit3, Mars, LOC622075, Arhgap9, Gli1, Inhbe, Inhbc, R3hdm2, Stac3, Ndufa4l2, Shmt2, Nxph4, Lrp1, LOC100043054, Stat6, Nab2, BC030440
Downstream geneAY053573, Rdhs, BC089597, Rdh7, Sdro, LOC382468, Hsd17b6, LOC100043618, Prim1, LOC100043077, Naca, Ptges3, Atp5b, Baz2a, LOC100043085, Rbms2, LOC100043624, Gls2, Spryd4, Mip, Timeless, Apon, Apof, Stat2, Il23a, Usp52, Tmem4, Cs, Coq10a, Ankrd52, Slc39a5, Obfc2b, Rnf41, Smarcc2, Myl6, Myl6b, Mbc2, Zc3h10, Rpl41, LOC668453, Pa2g4, Erbb3, LOC100043114, LOC668459, Rps26, Ikzf4, Suox, EG622589, Rab5b, Cdk2, Si, Dgka, LOC100043669, Wibg, LOC622655, Mmp19, 1110012D08Rik, Dnajc14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204F14.bB6Ng01-204F14.g
ACCGA024318GA024319
length1,0461,120
definitionB6Ng01-204F14.b B6Ng01-204F14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,254,196 - 127,254,846)(127,136,010 - 127,137,116)
sequence
gaattcagtaagaatttaacaaggaagttacctattcagtaaccaattag
cattataaaagacagagccaacagctcagggctagtctgcaagatgttta
ctaggacagaaagcacagtcttatccagatagggtttaccatgagaaaag
ctaggaaatcccactgaaacaggtttcttcactaggccctaagaattcag
gcagaactatagagcataaataaattttatgcctcagcccagccttttct
tttttatattaacaacaggcaggagatgtaacctcccccgcccccagctt
gaaatctggctgatcaggtttgactgttagcacaaggagagcatcagggg
tggagccagccaccctatcggtctgccactcccacagctgctacctgctg
cctagctgttcaggagacacgtggtcacctgaaactggactccaaggatg
atttggtcggaatgggccccttccccttcttcataacccagtgtctcaga
atagtaaaattgaaccttgatcagactgatgtcttgattttattctttct
cacgccgcctagttccctcttctcttccaggttccaagttgcctcccagg
ctagaacccagacatgtgggccactggccagcctcaacagaggaccatgg
ttctatcaggaagaggtgcaataagtgatttattacagttcttccttaag
gtctgggccttggttatcagtggtttatctgtgaatctaaagctgggcca
ctctccctacagcgggcaagctgcccatgggtctgctctacatttggcct
tctgttcctctctcctgtgcctgattctgttttaaattatggctgatatt
ccttgtcatccctgcctccactttctgtctcttgctcctgcgtgtgcaga
aactaaataggacatttgtcatgggggctattagcacacaatgtccgcag
aatccctagcctctgaactgcatcttggcaaatgtagtactaggcttttc
cttgacccaaagttcgtgcagaatattgggtgcctgtttggatctt
gaattcactgtaagtgactttgctcttctgtgggttgactcactgtgaaa
gacagatttcttttcaaggccattttttttaaaactgtatttgaatttgg
ggcgagcaaagcaagctcattttcttacccctgcctggtagttggagaag
tgaatgctgagagagctgcttcagacagtgaaggacagacggtgcctctt
ttgtatgctgtgtatccttggcctgcctgcctgcctgcctgcctgggtgg
ctccgctggatgcttctgagcctctgcgtgcccagacactgcttgagtca
gctcagtctcatccctcagaatgagctcatcaaggaccgagggagaagtg
gagtgagctggacactggagccatgagcgctgtgtgccagcaatcatcga
tccagaagctggttccaggagtgggggtcttgatggtattggaaatgcat
tgcttctaatgggtctgacctgagttcataaaacatgactcccgttaatg
ggaacataagaggcagccggcatacaactttacagttttcctttccttat
gagaacatactgatcaaagccaggaaaagtttagcaactttgataacttg
gttaccttgaaatgagaaagagccagttccccacccacattcttgttttc
tcagcagagggtggttttgtctgagatggctctttgggtcccactgttcc
attttaccatatgaccgcccattcaagggcatagccctctgtgaatcagt
tgtgttctctttagcctaccctacttgggtgattgaggttttggtgaata
aaaggacccaaataggccagagaattcccccaggccttgatacccgtgaa
gaaatttggacgggttacataatttgttgaaaggtatgctgagatggatc
ccagagttaaaatggaccttagctgtgcccacagctctgttggaacttga
gtggtaacaagtgaagtgtgcagacatgaaaaataatggcctctagtatt
ccaatgggactcggtcccaagatgggtgccctgcatttgccatgctgaga
gacatgggcaggtgtacggagcctctcccttaaggcaagcacactgaaaa
ccaatggtagtagcacacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_127254196_127254846
seq2: B6Ng01-204F14.b_45_695 (reverse)

seq1  ACCATGGTCCTCTGTTGAGGCTGGCCAGTGGCCCACATGTCTGGGTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTCCTCTGTTGAGGCTGGCCAGTGGCCCACATGTCTGGGTTCTA  50

seq1  GCCTGGGAGGCAACTTGGAACCTGGAAGAGAAGAGGGAACTAGGCGGCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGGAGGCAACTTGGAACCTGGAAGAGAAGAGGGAACTAGGCGGCGT  100

seq1  GAGAAAGAATAAAATCAAGACATCAGTCTGATCAAGGTTCAATTTTACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAATAAAATCAAGACATCAGTCTGATCAAGGTTCAATTTTACTA  150

seq1  TTCTGAGACACTGGGTTATGAAGAAGGGGAAGGGGCCCATTCCGACCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGACACTGGGTTATGAAGAAGGGGAAGGGGCCCATTCCGACCAAA  200

seq1  TCATCCTTGGAGTCCAGTTTCAGGTGACCACGTGTCTCCTGAACAGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTTGGAGTCCAGTTTCAGGTGACCACGTGTCTCCTGAACAGCTAG  250

seq1  GCAGCAGGTAGCAGCTGTGGGAGTGGCAGACCGATAGGGTGGCTGGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGGTAGCAGCTGTGGGAGTGGCAGACCGATAGGGTGGCTGGCTCC  300

seq1  ACCCCTGATGCTCTCCTTGTGCTAACAGTCAAACCTGATCAGCCAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGATGCTCTCCTTGTGCTAACAGTCAAACCTGATCAGCCAGATTT  350

seq1  CAAGCTGGGGGCGGGGGAGGTTACATCTCCTGCCTGTTGTTAATATAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGGGGGCGGGGGAGGTTACATCTCCTGCCTGTTGTTAATATAAAA  400

seq1  AAGAAAAGGCTGGGCTGAGGCATAAAATTTATTTATGCTCTATAGTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGGCTGGGCTGAGGCATAAAATTTATTTATGCTCTATAGTTCTG  450

seq1  CCTGAATTCTTAGGGCCTAGTGAAGAAACCTGTTTCAGTGGGATTTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATTCTTAGGGCCTAGTGAAGAAACCTGTTTCAGTGGGATTTCCTA  500

seq1  GCTTTTCTCATGGTAAACCCTATCTGGATAAGACTGTGCTTTCTGTCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCTCATGGTAAACCCTATCTGGATAAGACTGTGCTTTCTGTCCTA  550

seq1  GTAAACATCTTGCAGACTAGCCCTGAGCTGTTGGCTCTGTCTTTTATAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACATCTTGCAGACTAGCCCTGAGCTGTTGGCTCTGTCTTTTATAAT  600

seq1  GCTAATTGGTTACTGAATAGGTAACTTCCTTGTTAAATTCTTACTGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTGGTTACTGAATAGGTAACTTCCTTGTTAAATTCTTACTGAATT  650

seq1  C  651
      |
seq2  C  651

seq1: chr10_127136010_127137116
seq2: B6Ng01-204F14.g_71_1190

seq1  GAATTCACTGTAAGTGACTTTGCTCTTCTGTGGGTTGACTCACTGTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTAAGTGACTTTGCTCTTCTGTGGGTTGACTCACTGTGAAA  50

seq1  GACAGATTTCTTTTCAAGGCCATTTTTTTTAAAACTGTATTTGAATTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATTTCTTTTCAAGGCCATTTTTTTTAAAACTGTATTTGAATTTGG  100

seq1  GGCGAGCAAAGCAAGCTCATTTTCTTACCCCTGCCTGGTAGTTGGAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAGCAAAGCAAGCTCATTTTCTTACCCCTGCCTGGTAGTTGGAGAAG  150

seq1  TGAATGCTGAGAGAGCTGCTTCAGACAGTGAAGGACAGACGGTGCCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCTGAGAGAGCTGCTTCAGACAGTGAAGGACAGACGGTGCCTCTT  200

seq1  TTGTATGCTGTGTATCCTTGGCCTGCCTGCCTGCCTGCCTGCCTGGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGCTGTGTATCCTTGGCCTGCCTGCCTGCCTGCCTGCCTGGGTGG  250

seq1  CTCCGCTGGATGCTTCTGAGCCTCTGCGTGCCCAGACACTGCTTGAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGCTGGATGCTTCTGAGCCTCTGCGTGCCCAGACACTGCTTGAGTCA  300

seq1  GCTCAGTCTCATCCCTCAGAATGAGCTCATCAAGGACCGAGGGAGAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTCTCATCCCTCAGAATGAGCTCATCAAGGACCGAGGGAGAAGTG  350

seq1  GAGTGAGCTGGACACTGGAGCCATGAGCGCTGTGTGCCAGCAATCATCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGCTGGACACTGGAGCCATGAGCGCTGTGTGCCAGCAATCATCGA  400

seq1  TCCAGAAGCTGGTTCCAGGAGTGGGGGTCTTGATGGTATTGGAAATGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGCTGGTTCCAGGAGTGGGGGTCTTGATGGTATTGGAAATGCAT  450

seq1  TGCTTCTAATGGGTCTGACCTGAGTTCATAAAACATGACTCCCGTTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTAATGGGTCTGACCTGAGTTCATAAAACATGACTCCCGTTAATG  500

seq1  GGAACATAAGAGGCAGCCGGCATACAACTTTACAGTTTTCCTTTCCTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATAAGAGGCAGCCGGCATACAACTTTACAGTTTTCCTTTCCTTAT  550

seq1  GAGAACATACTGATCAAAGCCAGGAAAAGTTTAGCAACTTTGATAACTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACATACTGATCAAAGCCAGGAAAAGTTTAGCAACTTTGATAACTTG  600

seq1  GTTACCTTGAAATGAGAAAGAGCCAGTTCCCCACCCACATTCTTGTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCTTGAAATGAGAAAGAGCCAGTTCCCCACCCACATTCTTGTTTTC  650

seq1  TCAGCAGAGGGTGGTTTTGTCTGAGATGGCTCTTTGGGTCCCACTGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGAGGGTGGTTTTGTCTGAGATGGCTCTTTGGGTCCCACTGTTCC  700

seq1  ATTTTACCATATGACCGCCCATTCAAGGGCATAGCCCTCTGTGAATCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACCATATGACCGCCCATTCAAGGGCATAGCCCTCTGTGAATCAGT  750

seq1  TGTGTTCTCTTTAGCCTACCCTACTTGGGTGATTGAGG-TTTGGTGAATA  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTGTTCTCTTTAGCCTACCCTACTTGGGTGATTGAGGTTTTGGTGAATA  800

seq1  AAAGGACCCAAATAGGCCAGAGAATTCCCCCAGGCCTTGATACCCGTGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACCCAAATAGGCCAGAGAATTCCCCCAGGCCTTGATACCCGTGAA  850

seq1  G-AATTTGGACGGGTTACATAA-TTGTTGAAAGGTATGCTGAGATGGATC  897
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAAATTTGGACGGGTTACATAATTTGTTGAAAGGTATGCTGAGATGGATC  900

seq1  CCAGAGTTAAAATGGACCTTAGCTGTGCCCACAGCTCTTGTGGA--CTGA  945
      ||||||||||||||||||||||||||||||||||||||  ||||   |||
seq2  CCAGAGTTAAAATGGACCTTAGCTGTGCCCACAGCTCTGTTGGAACTTGA  950

seq1  GTGGT-ACAAGTTGAAGTGTGCAGACA-GGAAAATAATGCCTTCTAGTAT  993
      ||||| ||||| ||||||||||||||| | ||||||||| | ||||||||
seq2  GTGGTAACAAG-TGAAGTGTGCAGACATGAAAAATAATGGCCTCTAGTAT  999

seq1  TCCCAT-GGACTCGGGTCCAAGATGGGTG-CCTGCATTTG-CATGCTGAG  1040
      ||| || ||||||||  |||||||||||| |||||||||| |||||||||
seq2  TCCAATGGGACTCGGTCCCAAGATGGGTGCCCTGCATTTGCCATGCTGAG  1049

seq1  AGGACAGGGGCAGGTGTACGGAG-CTCTCCCCTTAGGCAGG--CACTG-A  1086
      | |||| |||||||||||||||| ||||||| | ||||| |  ||||| |
seq2  A-GACATGGGCAGGTGTACGGAGCCTCTCCCTTAAGGCAAGCACACTGAA  1098

seq1  AACCAA-GGGAGAAGCACACAG  1107
      |||||| || || |||||||||
seq2  AACCAATGGTAGTAGCACACAG  1120